Basic Information

Insect: Trachymyrmex septentrionalis
Gene Symbol: nfxl1_1
Assembly: GCA_001594115.1
Location: NW:1988310-1991923[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.1 5.7e+03 -3.3 1.1 15 19 133 137 132 137 0.81

2 17 0.42 2.2e+03 -2.0 0.6 4 10 168 174 168 174 0.93

3 17 5.7e-08 0.0003 20.0 15.1 1 18 182 198 182 199 0.98

4 17 1.1e-07 0.00058 19.1 11.9 1 18 236 252 236 253 0.94

5 17 1.5 8.2e+03 -3.8 1.7 6 10 278 282 278 282 0.93

6 17 1.5e-05 0.078 12.3 12.3 1 19 288 307 288 307 0.93

7 17 0.00014 0.74 9.2 8.3 1 18 343 360 343 361 0.97

8 17 0.007 37 3.7 7.6 1 12 395 406 395 406 0.94

9 17 0.87 4.6e+03 -3.0 1.0 6 10 416 420 415 420 0.91

10 17 2.4e-07 0.0013 18.0 12.9 1 19 426 444 426 444 0.91

11 17 0.00011 0.56 9.6 9.8 9 19 492 502 490 502 0.90

12 17 0.1 5.3e+02 0.0 9.5 1 12 512 522 505 522 0.85

13 17 0.87 4.6e+03 -3.0 5.8 14 18 554 558 554 559 0.89

14 17 0.0021 11 5.4 8.0 1 12 595 606 585 606 0.88

15 17 2 1.1e+04 -5.6 3.4 14 18 619 623 619 627 0.59

16 17 0.00016 0.82 9.0 18.2 3 19 636 652 635 652 0.92

17 17 0.00044 2.3 7.6 14.5 1 16 697 711 697 717 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.1	5.7e+03	-3.3	1.1	15	19	133	137	132	137	0.81
2	17	0.42	2.2e+03	-2.0	0.6	4	10	168	174	168	174	0.93
3	17	5.7e-08	0.0003	20.0	15.1	1	18	182	198	182	199	0.98
4	17	1.1e-07	0.00058	19.1	11.9	1	18	236	252	236	253	0.94
5	17	1.5	8.2e+03	-3.8	1.7	6	10	278	282	278	282	0.93
6	17	1.5e-05	0.078	12.3	12.3	1	19	288	307	288	307	0.93
7	17	0.00014	0.74	9.2	8.3	1	18	343	360	343	361	0.97
8	17	0.007	37	3.7	7.6	1	12	395	406	395	406	0.94
9	17	0.87	4.6e+03	-3.0	1.0	6	10	416	420	415	420	0.91
10	17	2.4e-07	0.0013	18.0	12.9	1	19	426	444	426	444	0.91
11	17	0.00011	0.56	9.6	9.8	9	19	492	502	490	502	0.90
12	17	0.1	5.3e+02	0.0	9.5	1	12	512	522	505	522	0.85
13	17	0.87	4.6e+03	-3.0	5.8	14	18	554	558	554	559	0.89
14	17	0.0021	11	5.4	8.0	1	12	595	606	585	606	0.88
15	17	2	1.1e+04	-5.6	3.4	14	18	619	623	619	627	0.59
16	17	0.00016	0.82	9.0	18.2	3	19	636	652	635	652	0.92
17	17	0.00044	2.3	7.6	14.5	1	16	697	711	697	717	0.93

Sequence Information

Coding Sequence: atgaaatttcagAGTTTGAAGATGCAGAAATTTAAGAAGGCTCAAGCACAGAATAAACTGTCTATTGAAAAGCACTTGGAAGCCAATGCGTTGTTGAATTCGTCTAGTGAAGATGAGGATGAAACTAACGAAGAAGATGTCCAAAATGTGGTGGGAAAAGTATTGTCAGCGTACCAAGGACAGAGCACAGATGCTGAAAAAGTGATATCATATTTGGTGAATTCCTTTCAAACTAGCAGTGCTGTTTGTTTGATATGTATATCCACTGTCAAGAAAATAGATCCAATATGGAACTGCGACAAGTGCTATGCATTTCTACACATGTCTTGCATCCTACACTGGATCAACGACAGTTTGAACTGCAAACGGGCTAAAGGAATTGCACCGATCTGGGCCTGCCCAAAATGCCGTATGGAATATGATCAAGATCAGATTCCAAGATCGTACAAATGCTTCTGTAAAAAGTCGATAGATCCTCAATATCAACCATGGATTATTCCACATTCTTGCGGCGAGGCCTGCGGCAAGCTTTTGCAACCAGAGTGCGGTCACAAATGCGTGTTGCTTTGCCATCCTGGTCCATGTCCACCTTGCGCTAAGATGGTATCTGTTAAATGTTATTGTGGCAAGCTACCAGCGCAACCGCGACGTTGCAATGCTAAAAACTGGAGCTGCGGAactatatgcaataaaaaatatgaattttgttCACACACTTGTAATAATGTGTGTCATACTGGAGAATGTTCCCCTTGTGTAGAAACAGTAGTACTGAAATGCCGTTGTAAGAGTAACGAGAAAGTAGGGAAATGCTACGAGGGTATATGGATTTGCGAAAAACCTTGCAATAGGAAATTCTCTTGTAACGTACACAGCTGTGAAAGCACTTGTCATCTACCTGGCGACTGCGGCAACTGCCCCTTGGAAAAGAATAGATATTGTCCTTGTGGGAAAAAACGATACGAAATTTCTTGTAGGCGGCAGCAAGTGCCAACGTGCGGGGATACGTGTGGCAAATTGTTGGACTGCGGATCGCACTTTTGCAACATGAGATGCCATACCGATCGCTGTGGTCAATGCTTGGAAGTCGTAACAAAAGCATGTAGATGCGGTAGTTACACAAAAGAGATAGCCTGCGCGAAGGAGTTCCACTGCAACAAGAAATGCATGCAAATGCGCTTATGCGGTAGACATTTGTGCAACAAAAAATGCTGCGATTGCATATCGAAGAACACGTCCAATCATTGTGAAAAAACGTGCGACAATACTCTCAACTGCCGTAAGCACAAATGCGCTGCACCTTGCCATAATGGTCCTTGCTATCCATGTACCAGAACGGACACTATACAGTGTCGATGTGGCAGCAGCAAGATAACGGTGCCATGTGGTACCAGGAAGAGAATCAAGCCACCACTATGCCACAGATCTTGCAAAATCCCACCTATCTGCCATCACAGCAAGAGAGAAACACACAAATGTCATCAAGGCCCATGTCCACCGTGTAAAAAGGTCTGCGGATTGACGCACAAGAGATGCAGTCACTCTTGCCCAGCCACTTGTCACACCAAAGTCTGGATGAAGATTAGAGCGAACGGAGTAAAGGCGCAGCCTATTGGACCCTGGGAAAAACCAAAGGATATTATGGAACTGAAGACTTTGCCATGTCCACCATGCGAGGTTTCCGTGCCTGTAACTTGTCTCGGTGGTCACGAGACGCGTCCTTGGCCGTGTCACATGTCGAAACCGAGCTCCTGCGGCAGACTTTGCGACCAACTATTACCATGCAAGAATCACACTTGCGAGTTGACTTGTCACAAACTACAGACTTCTGACAACGAGTCCAACAATGGTATTCCGTGCATGGAATGCGAGAAGGAGTGTAGTTTCGCACGACCGTCTGGTTGTACGCACACGTGTCCGCAACCTTGTCACCCAGCGCCCTGTAAACCATGTAAACAATTGGTGCGAGTCTCTTGTCATTGCGGTATTAGCACCCTTTATCGACATTGCGTGAACTTGACGTCTGCAACGAGTAAGGAACGGGATGAATTACTCAAATGCGGAAATCAATGcccaaaaaattatcGATGCGGCCACCGTTGTATCAATGATTGTCATCCAGGAGAATGCAAAGGCGGGGAAGGATGCAGCAAGAAAGTCAGATTATGGTGTAAGTGTAAACGAatcaaaaaagattttctttgTTCACTTCTTCAAAAGGAGCAGATTACTGTAGCATGCGATAGCATATGTGAATCACtgaaaaatgagagaaaagaGGCTCAAGAGGCTATGATAGCGAAAAAGCTAGAAGAGGAGGAGCTGCGCAATCGAGAAGAGATTGAAAAATTCGAGAAAAAGTTCAAGCCACGACGAAAGAGGAAGGACAAATATGAGAACTCGAAACAATCCAAAGAAAACGCGAGAAATAAGTATCACATTGCATGGATTTTAGCAATTATTGTAAGCATTATAGggataataatagtttatgtGACCGTTGCTGATTTAAGTATATCTGGATTGAGCTGA
Protein Sequence: MKFQSLKMQKFKKAQAQNKLSIEKHLEANALLNSSSEDEDETNEEDVQNVVGKVLSAYQGQSTDAEKVISYLVNSFQTSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLNCKRAKGIAPIWACPKCRMEYDQDQIPRSYKCFCKKSIDPQYQPWIIPHSCGEACGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTICNKKYEFCSHTCNNVCHTGECSPCVETVVLKCRCKSNEKVGKCYEGIWICEKPCNRKFSCNVHSCESTCHLPGDCGNCPLEKNRYCPCGKKRYEISCRRQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVVTKACRCGSYTKEIACAKEFHCNKKCMQMRLCGRHLCNKKCCDCISKNTSNHCEKTCDNTLNCRKHKCAAPCHNGPCYPCTRTDTIQCRCGSSKITVPCGTRKRIKPPLCHRSCKIPPICHHSKRETHKCHQGPCPPCKKVCGLTHKRCSHSCPATCHTKVWMKIRANGVKAQPIGPWEKPKDIMELKTLPCPPCEVSVPVTCLGGHETRPWPCHMSKPSSCGRLCDQLLPCKNHTCELTCHKLQTSDNESNNGIPCMECEKECSFARPSGCTHTCPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVNLTSATSKERDELLKCGNQCPKNYRCGHRCINDCHPGECKGGEGCSKKVRLWCKCKRIKKDFLCSLLQKEQITVACDSICESLKNERKEAQEAMIAKKLEEEELRNREEIEKFEKKFKPRRKRKDKYENSKQSKENARNKYHIAWILAIIVSIIGIIIVYVTVADLSISGLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476621;
90% Identity: iTF_01476621;
80% Identity: -