Tnyl005523.1
Basic Information
- Insect
- Temnothorax nylanderi
- Gene Symbol
- nfxl1
- Assembly
- GCA_030848795.1
- Location
- JASTWM010000035.1:870927-874249[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 2.4e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 18 0.15 3.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 18 5.6e-08 0.0013 20.0 15.1 1 18 175 191 175 192 0.98 4 18 9.7e-07 0.022 16.1 10.9 4 18 231 245 229 246 0.94 5 18 1.5 3.5e+04 -3.7 1.7 6 10 271 275 271 275 0.93 6 18 1.5e-05 0.33 12.3 12.3 1 19 281 300 281 300 0.93 7 18 0.00014 3.2 9.2 8.3 1 18 336 353 336 354 0.97 8 18 0.0069 1.6e+02 3.8 7.6 1 12 388 399 388 399 0.94 9 18 0.93 2.1e+04 -3.0 1.2 6 10 409 413 408 413 0.91 10 18 9e-08 0.002 19.4 12.9 1 19 419 437 419 437 0.91 11 18 0.0001 2.4 9.6 9.8 9 19 485 495 483 495 0.90 12 18 0.0047 1.1e+02 4.3 7.5 1 12 505 515 505 515 0.95 13 18 0.86 2e+04 -2.9 5.8 14 18 547 551 547 552 0.89 14 18 0.00053 12 7.3 6.5 1 12 588 599 582 599 0.82 15 18 2 4.5e+04 -5.6 3.4 14 18 612 616 612 620 0.59 16 18 0.00015 3.5 9.0 18.2 3 19 629 645 628 645 0.92 17 18 0.00044 10 7.6 12.1 1 16 690 704 690 708 0.97 18 18 1.4 3.2e+04 -3.6 0.6 6 10 740 744 739 744 0.86
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAAGAGGGCTCAAGCACAGAATAAACTGTCTATCGAAAGGCACTTGGAAGCCAACGCGTCGTTGAATTCTTCTAGCGAAGAAGAGGATGAAACAAATGAGGAGGATGTCCAAAATGTGGTGGACAAAGTATTGTTGGCGTACCAGGGACAGAGCACGGATGCGGAGAAAGTGATATCGTACCTGGTTAATTCCTTTCAGACCAGCAGCGCTGTTTGTTTGATATGTATATCTACTGTCAAGAAGATAGATCCAATATGGAACTGCGACAAATGCTATGCATTTCTACACATGTCTTGCATTCTACACTGGATCAACGACAGTTTGATCTTCAAACGAGCCAAAGGGATTACCCCAATCTGGGCatgTCCAAAATGCCGTATGGAATACGATCAGGATCAGATTCCAAGATCGTACAAATGCTTCTGTAAGAAGACTGTGGATCCTCCGCATCAACCCTGGGCTATTCCACATTCATGCGGTGAAACCTGCGGCAAACTTCTGCAACCAGAGTGCGGTCATAAATGCGTGTTGCTCTGCCATCCTGGTCCATGTCCGCCCTGCGCCAAGATGGTGTCGGTTAAATGTTACTGCGGCAAGCTACCGGCGCAACCGCGACGTTGCAATGCTAAAAACTGGTGCTGCGGGACTGTGTGcaacaaaaaatatgaatcTTGTGTACACAGTTGTAATAGCCTGTGTCACACTGGAGAATGTTCCCCCTGTGTAGAAATAGTATTACTGAAATGCCGTTGTAAGAGTAACGAGAAGATAGGGAAGTGCTACGAGGGCACGTGGATCTGCGAGAAACCTTGTAACAGGAGATTTTCTTGCAACGTACATAGCTGCGAGAGCACTTGTCATCTACCCGGCGATTGCGGCAACTGTCCCCTGGAAAAGAACAGATCCTGTCCCTGCGGAAAGAAACGATACGAAGTTTCTTGCAGGCGGCAGCAAGTGCCAACGTGCGGCGACACGTGCGGCAAGTTGCTGGATTGCGGGTCGCACTTCTGCAACATGAGATGCCATACCGATCGCTGTGGTCAGTGCTTGGAAGTCTTAACGAAAGCGTGCAGATGCGGCAGCTACACGAAAGAGATCGCCTGCGCAAAGGAGTTCCACTGCAACAAGAAATGCATGCAAATGCGTTTATGCGGTAGACATTTGTGCAACAAGAAATGCTGCGACTGCATATCGAAGAACACGTCTAATGCGTGTGAGAAAACCTGCGAGAACACGCTCAACTGCCGTAAGCACAAATGCGCCGCGCCTTGCCACAGCGGTCCTTGCTATCCGTGCACCAGAACGGACGTCATACAATGTCGATGCGGCAGCAGCAAGATAACAGTGCCGTGCGGTACGAGAAAGAGAATCAAGCCCCCGCCGTGTAACAAATCCTGCAAGATTCCACCTATCTGCCATCACAGCAAGAGGGAAACACACAAGTGTCATCAGGGCCCATGCCCGCCGTGTAAAAAGGTCTGCGGATTGACGCACAAGAGATGCGGTCACTCTTGCCCGGTCACTTGTCACACCAAGGTCTGGGTGAAGAGCAGAGCGAACGGAGTAAAGGCGCAGCCTGTTGGACCCTGGGATAAACCGAAGGACATTATGGAGCTGAAGACTTTGCCGTGTCCACCGTGCGAGGTTTCCGTGCCTGTGACCTGTCTCGGTGGTCACGAGACGCGCCCTTGGCCGTGTCACATGTCGAAACCGAGCTCCTGCGGCAGATTTTGCGGCCAACTACTGCCATGCCAGAATCACACCTGCGAGCTGATCTGTCACAAGCTACAAACTTCCGACGACGAATCCAACAGCGGTACTCCGTGCATGGAGTGCGAGAAGGAGTGCGATTTCGCACGACCGCCAGGTTGTACGCACACGTGCCCGCAACCTTGTCACCCAGCGCCATGTAAACCATGCAAGCAATTGGTGCGAGTCTCTTGTCATTGTGGTATTAGCACCCTATATCGGCATTGTGTAAACCTGACATCTGCAACGAGTAAGGAACGGGACGAGTTACTCAAATGTGGAAACCAATGtccaaaaaatTACCCATGCGGCCACCGTTGCGTCAACGATTGTCATCCAGGAGAATGTAAAGGTGGAGAGGGATGCGGCAAGAAAGTTAGATTATGGTGTAAGTGTAAACGGATCAAGAAGGACTTTCTTTGTTCGTTTCTTCAAAAGGAGCAGATCACCGTAGAGTGCGATAGCGTGTGCGAATCATTGAAGAATGAAAGAAAGGAAGCCCAGAAAGCTATGATAGCGAAGAAACTAGAAGAGGAGGAGCTGCGCAACCGGGAAGAGATTGAGAAGTTCGAGAAGAAGTTCAAGCCACGACGAAAAAGGAAGGACAAATACGAGAGCTTGAGACAGTCGCAAGAAAATGCAAGGAATAAGTATCGCAGCATGTGGATTTTAGCAATTATCGTAAGCATTATGGGGATAATAATAGTGTATTTGACTGCTCCTGACTtaaatatatctgtattgAGTTGA
- Protein Sequence
- MQKFKRAQAQNKLSIERHLEANASLNSSSEEEDETNEEDVQNVVDKVLLAYQGQSTDAEKVISYLVNSFQTSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLIFKRAKGITPIWACPKCRMEYDQDQIPRSYKCFCKKTVDPPHQPWAIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWCCGTVCNKKYESCVHSCNSLCHTGECSPCVEIVLLKCRCKSNEKIGKCYEGTWICEKPCNRRFSCNVHSCESTCHLPGDCGNCPLEKNRSCPCGKKRYEVSCRRQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVLTKACRCGSYTKEIACAKEFHCNKKCMQMRLCGRHLCNKKCCDCISKNTSNACEKTCENTLNCRKHKCAAPCHSGPCYPCTRTDVIQCRCGSSKITVPCGTRKRIKPPPCNKSCKIPPICHHSKRETHKCHQGPCPPCKKVCGLTHKRCGHSCPVTCHTKVWVKSRANGVKAQPVGPWDKPKDIMELKTLPCPPCEVSVPVTCLGGHETRPWPCHMSKPSSCGRFCGQLLPCQNHTCELICHKLQTSDDESNSGTPCMECEKECDFARPPGCTHTCPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVNLTSATSKERDELLKCGNQCPKNYPCGHRCVNDCHPGECKGGEGCGKKVRLWCKCKRIKKDFLCSFLQKEQITVECDSVCESLKNERKEAQKAMIAKKLEEEELRNREEIEKFEKKFKPRRKRKDKYESLRQSQENARNKYRSMWILAIIVSIMGIIIVYLTAPDLNISVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- iTF_01476621;
- 80% Identity
- -