Sinv007476.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Solenopsis invicta
Gene Symbol
nfxl1
Assembly
GCA_016802725.1
Location
NC:10769108-10774796[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.6 7.6e+03 -3.2 1.1 15 19 126 130 125 130 0.81
2 16 0.22 1e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 16 8.4e-08 0.00039 20.0 15.1 1 18 175 191 175 192 0.98
4 16 2.9e-07 0.0013 18.3 11.0 4 18 231 245 229 246 0.94
5 16 1.4 6.5e+03 -3.0 4.0 10 13 264 267 262 276 0.64
6 16 2.2e-05 0.1 12.3 12.3 1 19 281 300 281 300 0.93
7 16 0.00021 0.98 9.2 8.3 1 18 336 353 336 354 0.97
8 16 0.01 49 3.8 7.6 1 12 388 399 388 399 0.94
9 16 1.7 8.2e+03 -3.4 1.4 6 10 409 413 408 413 0.88
10 16 1.4e-07 0.00065 19.3 12.7 1 18 419 436 419 437 0.91
11 16 0.00016 0.74 9.6 9.8 9 19 485 495 483 495 0.90
12 16 0.74 3.5e+03 -2.2 8.8 3 12 506 515 498 515 0.83
13 16 1.3 6.1e+03 -2.9 5.8 14 18 547 551 547 552 0.89
14 16 0.00041 1.9 8.2 5.6 1 12 588 599 578 599 0.80
15 16 0.00023 1.1 9.0 18.2 3 19 629 645 628 645 0.92
16 16 0.0037 17 5.2 14.8 1 16 690 704 690 710 0.93

Sequence Information

Coding Sequence
ATGCAGAAATTTAAGAAAGCTCAAGCACAGAATAAACAGTCTATCGAAAGGCACTTAGAGGCTAATGCGTTATTGAATTCCTCCAGTGAGGAGGAGGATGACACAAATGAGGAAGATATCCAAGATGTAGTCGGCAAAGTATTGTCTGCTTATCAGGGACAGAGTACAGATGCGGAGAAAGTAATATCATATCTAGTGAATTCCTTTCAAAGTAGCAGTGCTGTTTGCTTGATATGTATATCAACTGTCAAGAAGATAGATCCAATATGGAACTGCGACAAATGCTATGCATTTCTACACATGTCGTGTATCCTACACTGGATCAACGACAGTTTGAGCTACAAACGGGCTAAAGGAATCGCACCGATCTGGGCATGTCCAAAATGCCGTATGGAGTACGACCAGGATCAGTTTCCAAAATCATACAAATGCTTCTGCAAAAAGACCGTAGATCCTCTATATACACCCTGGGTCATTCCACATTCTTGTGGCGAAACTTGTGGCAAGCTTCTGCAACCGGAGTGCGGTCACAAGTGTGTGCTGCTCTGCCATCCTGGTCCGTGTCCGCCGTGCGCCAAGATAGTATCGGCTAAATGTTACTGCAGTAAACTACCGGCACAACCGCGACGTTGCAACGCCAAAAACTGGAGCTGTGGTACTGTGTGCAACAAAAAATATGAGTCTTGTCTGCACACTTGTAACAGCCTATGTCATATTGGAGAATGTCCCCCTTGTGCGGAAATAGTATTACTGAAATGTCGTTGTAAGAGTAACGAGAAGATAGGGAAATGTCACGAGGGCACGTGGATCTGCGAGAAACCTTGCAACAAGAAATTCTCTTGCAACGTACACAGTTGCGAGAGTACTTGTCATTTACCCGGTGACTGCGGCAACTGTCCCCTGGAAAAAAATAGATGTTGTCCCTGTGGAAAGAAACGATATGAGATTTCTTGCAGGCGGCAGCAAGTGCCAACGTGTGGCGATACGTGTGGCAAATTGTTGGACTGCGGCTCACATTTCTGCAACATGAGATGCCATACCGATCGCTGCGGCCAGTGCCTGGAAGTCGTGACAAAGGTCTGCAGATGCGGCAGTTACAAGAAAGAGATCGCCTGCGCGAAAGAGTTCCACTGCAACAAGAAATGCGTACAGATGCGCTTGTGCGGTAGACATTTGTGCAACAAGAAATGCTGCGACTGTATATTGAAGAACACATCCAATCCCTGTGAGAAAACATGCGAGAATACACTCAACTGTCGCAAGCATAAATGCGCCGCGCCTTGCCACAGCGGTCCTTGTTACCCATGCAACAGAACGGACGTTATACAGTGTCGATGTGGCAGCAGCAAGATAACGGTACCGTGCGGTACCAGGAAGAGGATCAAACCACCGCCGTGTAACAAGTCCTGTAAGATTCCACCTATCTGCCACCACAGCAAGAGGGAAACGCATAAATGTCATCAGGGCCCGTGCCCGCCATGTAAGAAGATCTGTGGGCTGATACATAAGAGATGCGATCATTCTTGCCCGACCACTTGTCACACCAAAGTCTGGGTGAAGATCAGAGCGAACGGAGTAAAGGCGCAACCTATTGGACCCTGGGAAAAACCGAAAGACGTTATGGAATTAAAGACCTTACCATGTCCACCGTGCGAGGTTTCTGTACCCGTGACCTGTCTCGGTGATCACGAGACGCGCCTTTGGCCATGTTACATGTCGAAACCGAGTTCCTGCGGCAGACCTTGTGGCCAACAGTTACCGTGCAAGAATCACACTTGCGAGTTGATTTGTCACAAACTACAGATTTCTGACGATGAGTCTAGTAACGGTACTCCGTGCATGGATTGTGAGAAGGAATGCAATTTTGCACGACCACCAGGTTGTACGCACACGTGCCCACAACCTTGTCACCCGGCTCCATGTAAACCATGCAAGCAATTGGTGCGAGTCTCTTGCCATTGCGGTATCAGCACCCTTTATCGGCATTGCGTAAACTTGACGTCTGCAACAAGCAAGGAACGGGACGAGTTACTTAAATGCGGAAACCAATGCCCAAAAAATTATCCGTGCGGCCACCGTTGCGTCAACGATTGTCACCCGGGAGAATGCAAAGGCGGAGAGGGATGCAGCAAGAAAGTCAGATTATGGTGTAAATGTAAACGTATTAAGAAGGACTTTCTTTGTTCATTTCTTCAAAAGGAGCAGATTATTGTAGACTGCGATAGCGTGTGCGAGtcgttgaaaaatgaaaaaaaggagGCCCAGAAAGCTATGATAGCGAAGAAGCTGGAAGAAGAAGAACTGCGCAATCGAGAAGAGATTGAAAAATTCGAAAAGAAGTTTAGGCCACGACGAAAGAGAAAGGATAAGTACGAGAACTTAAAGCAGTCTCAAGGTAACACAAGAAATAAGTATCGCAGCGTGTGGATCTTGGCGTTCATTGTAAGCATTATAGGAATAGTAATAGTGTATGTGATCGCTCCTGACTTAAGTGTACTTGGGTTGAGTTGA
Protein Sequence
MQKFKKAQAQNKQSIERHLEANALLNSSSEEEDDTNEEDIQDVVGKVLSAYQGQSTDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLSYKRAKGIAPIWACPKCRMEYDQDQFPKSYKCFCKKTVDPLYTPWVIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKIVSAKCYCSKLPAQPRRCNAKNWSCGTVCNKKYESCLHTCNSLCHIGECPPCAEIVLLKCRCKSNEKIGKCHEGTWICEKPCNKKFSCNVHSCESTCHLPGDCGNCPLEKNRCCPCGKKRYEISCRRQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVVTKVCRCGSYKKEIACAKEFHCNKKCVQMRLCGRHLCNKKCCDCILKNTSNPCEKTCENTLNCRKHKCAAPCHSGPCYPCNRTDVIQCRCGSSKITVPCGTRKRIKPPPCNKSCKIPPICHHSKRETHKCHQGPCPPCKKICGLIHKRCDHSCPTTCHTKVWVKIRANGVKAQPIGPWEKPKDVMELKTLPCPPCEVSVPVTCLGDHETRLWPCYMSKPSSCGRPCGQQLPCKNHTCELICHKLQISDDESSNGTPCMDCEKECNFARPPGCTHTCPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVNLTSATSKERDELLKCGNQCPKNYPCGHRCVNDCHPGECKGGEGCSKKVRLWCKCKRIKKDFLCSFLQKEQIIVDCDSVCESLKNEKKEAQKAMIAKKLEEEELRNREEIEKFEKKFRPRRKRKDKYENLKQSQGNTRNKYRSVWILAFIVSIIGIVIVYVIAPDLSVLGLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
iTF_01354999;
80% Identity
-