Basic Information

Insect: Formica exsecta
Gene Symbol: nfxl1
Assembly: GCA_003651465.1
Location: NW:1773836-1777899[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.54 6e+03 -3.3 1.1 15 19 126 130 125 130 0.81

2 17 0.073 8.2e+02 -0.5 0.8 4 10 161 167 160 167 0.95

3 17 2.8e-08 0.00031 20.0 15.1 1 18 175 191 175 192 0.98

4 17 1.5e-08 0.00017 20.9 10.9 4 18 231 245 229 246 0.94

5 17 0.25 2.8e+03 -2.2 0.5 6 10 271 275 270 275 0.95

6 17 0.00017 1.9 7.9 11.2 1 19 281 300 281 300 0.92

7 17 0.00067 7.5 6.0 10.5 1 18 336 353 336 354 0.97

8 17 0.0059 66 3.0 8.0 1 12 388 399 388 399 0.94

9 17 0.58 6.5e+03 -3.4 1.4 6 10 409 413 408 413 0.88

10 17 4.5e-08 0.00051 19.4 12.9 1 19 419 437 419 437 0.91

11 17 6.9e-05 0.77 9.2 9.4 10 19 486 495 483 495 0.90

12 17 0.0024 26 4.3 7.5 1 12 505 515 505 515 0.95

13 17 0.43 4.8e+03 -3.0 5.8 14 18 548 552 548 553 0.89

14 17 0.037 4.2e+02 0.5 8.2 1 12 589 600 579 600 0.80

15 17 1 1.1e+04 -5.6 3.4 14 18 613 617 613 621 0.59

16 17 0.00043 4.8 6.6 17.4 3 19 630 646 629 646 0.92

17 17 4.4e-05 0.49 9.8 12.8 1 16 691 705 691 711 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.54	6e+03	-3.3	1.1	15	19	126	130	125	130	0.81
2	17	0.073	8.2e+02	-0.5	0.8	4	10	161	167	160	167	0.95
3	17	2.8e-08	0.00031	20.0	15.1	1	18	175	191	175	192	0.98
4	17	1.5e-08	0.00017	20.9	10.9	4	18	231	245	229	246	0.94
5	17	0.25	2.8e+03	-2.2	0.5	6	10	271	275	270	275	0.95
6	17	0.00017	1.9	7.9	11.2	1	19	281	300	281	300	0.92
7	17	0.00067	7.5	6.0	10.5	1	18	336	353	336	354	0.97
8	17	0.0059	66	3.0	8.0	1	12	388	399	388	399	0.94
9	17	0.58	6.5e+03	-3.4	1.4	6	10	409	413	408	413	0.88
10	17	4.5e-08	0.00051	19.4	12.9	1	19	419	437	419	437	0.91
11	17	6.9e-05	0.77	9.2	9.4	10	19	486	495	483	495	0.90
12	17	0.0024	26	4.3	7.5	1	12	505	515	505	515	0.95
13	17	0.43	4.8e+03	-3.0	5.8	14	18	548	552	548	553	0.89
14	17	0.037	4.2e+02	0.5	8.2	1	12	589	600	579	600	0.80
15	17	1	1.1e+04	-5.6	3.4	14	18	613	617	613	621	0.59
16	17	0.00043	4.8	6.6	17.4	3	19	630	646	629	646	0.92
17	17	4.4e-05	0.49	9.8	12.8	1	16	691	705	691	711	0.87

Sequence Information

Coding Sequence: ATGCAGAAGTTTAAGAGAGCTCAAGCACAAAATAAGTTGGCCATTGAAAGACACTTGGAGGCCAACATATCATTAAATTCGTCTAGTGAAGAGGAAGATGAAACAAATGAGGAAGATGTCCAAAATGTGGTGGACAACGTATTATTGGCATATCAAGGACAAGGCATGGATGCAGAAAAAGTGATATCATACTTAGTTAACTCTTTTCAATCAAGTAGCGCTGTTTGCTTGATATGTATATCAACTGTCAAGAAAATAGATCCGATATGGAACTGCAACAAATGCTATGCATTTCTGCACATGTCCTGCATCTTACATTGGATTAATGATAGTTTAAGTTACAAACGGACTAAAGGAATCACACCAATCTGGGCATGCCCAAAATGTCGCATGGAATATAACCAGGACCAGATTCCAAGATCGTACGAATGTTTCTGTAAAAAGACTATAAATCCTCCATATCAACCCTGGATTATTCCACATTCTTGTGGCGAAACTTGTAACAAACTCTTACAACCAGAGTGTGGTCACAAATGTGTGTTGCTCTGTCATCCTGGTCCATGCCCACCATGCGCAAAAATGGTGTCTGTCAAATGTTATTGCGGTAAGCTACCGCCGCAGCCACGTCGTTGCAATGCTAAAAATTGGAGTTGTGGAACAATATGCagcaaaaaatatgaattttgctTGCAcacttgtaataatttatgtcaTGTTGGAGAGTGTCCCCCTTGTATGGAAACAGTATTACTGAACTGCCATTGTAAGAGTAATCAAAAGGAAGGAAAATGCTACGAAGGTACATGGATGTGCGAGAGACTTTGTAACAGAAAGTTCTCCTGCAATGTACATACCTGCGAGAGTACATGTCATTTACCCGATGATTGCGGTAATTGTCCGTTAGAGAAGAACAGATGCTGCCCTTGCGGAAAGAAACGATACGAAGTTACTTGCAGGCAGCAGCAAGTGCCAACGTGTGGCGATACTTGCGATAAATTGTTAGACTGCGGATCACACTTTTGCAACATGAGATGTCATACCGATCGTTGTGGTCACTGCTTAGAAGTGGTAACAAAAGCCTGCAAATGTGGTAGTTATACCAAAGAGATTGCTTGTGGAAAAGAATTTCACTGCAACAAGAAATGCACACAAATGCGCTTATGTGGTAAACAcctgtgtaataaaaaatgttgcgATTGCGTATTGAAGAATACATCTAATCCCTGCGAGAAAACGTGCGAAAATATGCTTAATTGTCGGAAGCACAAGTGCGCCGCACCCTGCCATAGCGGTCCTTGCTATCCATGCACAAGAATGGACGTCATACAATGTCGATGTGGCAGCAGCAAAATAACGGTGCCATGCGGTACCAGCAAGAGAATCAGGCCACCGCCGTGTAACAAATCCTGCAAAATTCCGCCTGTCTGTCATCACAGTAAGAGAGAAACTCACAGATGTCATCAAGGCCCATGTCCACCCTGCAAAAAGATCTGCAGCTTGACCCACAAGAGATGTGGTCACTCTTGCCCAGTCACTTGTCATACGAAAGTCTGGGTGAAGGTGAAAGCGAACGGAGTAAAAGCGCAGCCCATTGGACCTTGGGAAAAGCCTGGGAAGGACATTATGGAGTTGAAGACTTTACCGTGCCCACCATGTGAAATTTCTGTGCTTGTGACCTGTCTCGGAGGTCATGAGACGCGTCCCTGGCCGTGTCATATGTCGAAACCGAGCTCCTGCGGCAGAGCTTGCGGCCAACTATTGCCGTGTAAAAATCACATCTGCGAGTTGACCTGTCATAAGATACAAACTTCTGATGACAAATCAGATAGCGGTACGCCGTGCATGGAATGTGAGAAAGAATGTCAATTTGCACGTTTACCAGGTTGTACACACGCATGTCCACAACCTTGTCATCCGGCGCCTTGCAAACCGTGCAAACAATTAGTGCGAGTGTCTTGTCACTGTGGTATTAGCACCCTTTACCGACACTGTGTAGACTTGGTGTCCACGACGAATAAGAAACGCGACGAATTACTCAAATGTGGAAACCAGTGTCCAAAAAATtATTTGTGCGGCCACCGTTGCATCAACGATTGCCATCCAGGAGAATGCAAAGGAAAGGAGCAATGCAACAAGAAAGTTAGATTATGGTGTAAATGTAAAAGGATCAAAAAGGATTTTCTTTGTTTGTTTCTTCAAAAAGAGCAGATTATTGTAGAATGCGATAATGTGTGTGAgtcattgaaaattgagaagAAGGAGGCCCAAGAAGCTATTATAGCAAAGAAACGAGAGGCGGAAGAATTACGCAATCGGGAAGAGATTGAGAAATTCGAGAAAAAGTTCAAGCCACGCCGAAAGAGGAAAGACAAGTATGAAAACTCAAAACTATCCCAAGGAAACATTGGGAATAAGTATTGGAATGCATGGATTTTAGCGATTTTTGTAAGCATTATAGGTATAGTAATAGTATATATGACTATTTCTGATTCAAGTATgcttgaaataatttcattttaa
Protein Sequence: MQKFKRAQAQNKLAIERHLEANISLNSSSEEEDETNEEDVQNVVDNVLLAYQGQGMDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCNKCYAFLHMSCILHWINDSLSYKRTKGITPIWACPKCRMEYNQDQIPRSYECFCKKTINPPYQPWIIPHSCGETCNKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPPQPRRCNAKNWSCGTICSKKYEFCLHTCNNLCHVGECPPCMETVLLNCHCKSNQKEGKCYEGTWMCERLCNRKFSCNVHTCESTCHLPDDCGNCPLEKNRCCPCGKKRYEVTCRQQQVPTCGDTCDKLLDCGSHFCNMRCHTDRCGHCLEVVTKACKCGSYTKEIACGKEFHCNKKCTQMRLCGKHLCNKKCCDCVLKNTSNPCEKTCENMLNCRKHKCAAPCHSGPCYPCTRMDVIQCRCGSSKITVPCGTSKRIRPPPCNKSCKIPPVCHHSKRETHRCHQGPCPPCKKICSLTHKRCGHSCPVTCHTKVWVKVKANGVKAQPIGPWEKPGKDIMELKTLPCPPCEISVLVTCLGGHETRPWPCHMSKPSSCGRACGQLLPCKNHICELTCHKIQTSDDKSDSGTPCMECEKECQFARLPGCTHACPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVDLVSTTNKKRDELLKCGNQCPKNYLCGHRCINDCHPGECKGKEQCNKKVRLWCKCKRIKKDFLCLFLQKEQIIVECDNVCESLKIEKKEAQEAIIAKKREAEELRNREEIEKFEKKFKPRRKRKDKYENSKLSQGNIGNKYWNAWILAIFVSIIGIVIVYMTISDSSMLEIISF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476621;
90% Identity: iTF_01245614;
80% Identity: -