Fase006490.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Formica aserva
Gene Symbol
nfxl1
Assembly
GCA_037039905.1
Location
JAXRKO010000005.1:1333639-1336684[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1.6 2.8e+04 -3.3 1.1 15 19 126 130 125 130 0.81
2 17 0.22 3.8e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 17 8.4e-08 0.0015 20.0 15.1 1 18 175 191 175 192 0.98
4 17 4.5e-08 0.00078 20.9 10.9 4 18 231 245 229 246 0.94
5 17 0.76 1.3e+04 -2.2 0.5 6 10 271 275 270 275 0.95
6 17 0.00052 9 7.9 11.2 1 19 281 300 281 300 0.92
7 17 0.002 35 6.0 10.5 1 18 336 353 336 354 0.97
8 17 0.018 3e+02 3.0 8.0 1 12 388 399 388 399 0.94
9 17 1.7 3e+04 -3.4 1.4 6 10 409 413 408 413 0.88
10 17 1.4e-07 0.0023 19.4 12.9 1 19 419 437 419 437 0.91
11 17 0.00021 3.6 9.2 9.4 10 19 486 495 483 495 0.90
12 17 0.0071 1.2e+02 4.3 7.5 1 12 505 515 505 515 0.95
13 17 1.3 2.2e+04 -3.0 5.8 14 18 548 552 548 553 0.89
14 17 0.11 1.9e+03 0.5 8.2 1 12 589 600 579 600 0.80
15 17 3 5.2e+04 -5.6 3.4 14 18 613 617 613 621 0.59
16 17 0.0013 22 6.6 17.4 3 19 630 646 629 646 0.92
17 17 0.00013 2.3 9.8 12.8 1 16 691 705 691 711 0.87

Sequence Information

Coding Sequence
ATGCAGAAGTTTAAGAGAGCTCAAGCACAAAATAAGTTGTCCATTGAAAGACACTTGGAGGCCAACATATCATTAAATTCGTCTAGTGAAGAGGAAGATGAAACAAATGAGGAAGATGTCCAAAATGTGGTGGACAACGTATTATTGGCATATCAAGGACAAGGCATGGATGCAGAAAAAGTGATATCATACTTAGTTAACTCTTTTCAATCAAGTAGCGCTGTTTGCTTGATATGTATATCAACTGTCAAGAAAATAGATCCGATATGGAACTGCAACAAATGCTATGCATTTCTGCACATGTCCTGCATCTTACATTGGATTAATGATAGTTTAAGTTACAAACGGACTAAAGGAATCACACCAATCTGGGCATGTCCAAAATGTCGCATGGAATATAACCAGGACCAGATTCCAAGATCGTACGAATGTTTCTGTAAAAAGACTATAAATCCTCCATATCAACCCTGGATTATTCCACATTCTTGTGGCGAAACTTGTAACAAACTCTTACAACCAGAGTGTGGTCACAAATGTGTGTTGCTCTGTCATCCTGGTCCATGCCCACCATGCGCAAAAATGGTGTCTGTCAAATGTTATTGCGGTAAGCTACCGCCGCAGCCACGTCGTTGCAATGCTAAAAATTGGAGTTGTGGAACAATATGCagcaaaaaatatgaattttgcTTGCAcacttgtaataatttatgtcatgttggAGAGTGTCCCCCTTGTATGGAAACAGTATTACTGAACTGCCATTGTAAGAGTAATCAAAAGGAAGGAAAATGCTACGAAGGTACATGGATGTGCGAGAGACTTTGTAATAGAAAGTTCTCCTGCAATGTACATACCTGCGAGAGTACATGTCATTTACCCGATGATTGCGGTAATTGTCCGTTAGAGAAGAACAGATGTTGCCCTTGCGGGAAGAAACGATACGAAGTTACTTGCAGGCAGCAGCAAGTGCCAACGTGTGGCGATACTTGCGATAAATTATTAGACTGCGGATCACACTTTTGCAACATGAGATGTCATACCGATCGTTGTGGTCACTGCTTAGAAGTGGTAACAAAAGCCTGCAAATGTGGTAGTTATACCAAAGAGATTGCTTGTGGAAAAGAATTTCACTGCAACAAGAAATGCACACAAATGCGCTTATGTGGTAAACACctgtgtaataaaaaatgttgcgATTGCATATTGAAGAATACATCTAATCCCTGCGAGAAAACGTGCGAAAATATGCTTAATTGTCGGAAGCACAAGTGCGCCGCACCCTGCCATAGCGGTCCTTGCTATCCATGCACAAGAATGGACGTCATACAATGTCGATGTGGCAGCAGCAAAATAACGGTGCCATGCGGTACCAGAAAGAGAATCAGGCCACCGCCGTGTAACAAATCCTGCAAAATTCCGCCTGTCTGTCATCACAGTAAGAGAGAAACTCACAGATGTCATCAAGGCCCATGTCCACCCTGCAAAAAGATCTGCAGCTTGACGCACAAGAGATGTGGTCACTCTTGCCCAGTCACTTGTCATACGAAAGTCTGGGTGAAGGTGAAAGCGAACGGAGTAAAAGCGCAGCCCATTGGACCTTGGGAAAAGCCTGGGAAGGACATTATGGAGTTGAAGACTTTACCGTGCCCACCATGTGAAATTTCTGTGCTTGTGACCTGTCTCGGAGGTCATGAGACGCGTCCCTGGCCGTGTCATATGTCGAAACCGAGCTCCTGCGGCAGAGCTTGCGGCCAACTATTGCCGTGTAAAAATCACATCTGCGAGTTGACCTGTCATAAGATACAAACTTCTGATGACAAATCAGATAGCGGTACGCCGTGCATGGAATGTGAGAAAGAATGTCAATTTGCACGTTTACCAGGTTGTACACACGCATGTCCGCAACCTTGTCATCCGGCGCCTTGCAAACCGTGCAAACAATTAGTGCGAGTGTCTTGTCACTGTGGTATTAGCACCCTTTACCGACACTGTGTAGACTTGGTGTCCACGACGAATAAGAAACGCGACGAATTACTCAAATGTGGAAACCAGTGTCCAAAAAATtATTCGTGCGGCCACCGTTGCATCAACGATTGCCATCCAGGAGAATGCAAAGGAAAGGAACAATGCAACAAGAAAGTTAGATTATGGTGTAAATGTAAAAGGATCAAAAAGGATTTTCTTTGTTTGTTTCTTCAAAAAGAGCAGATTATTGTAGAATGCGATAATGTGTGTGAGTCATTGAAAATTGAGAAGAAGGAGGCCCAAGAAGCTATTATAGCAAAGAAACGAGAGGCGGAAGAATTACGCAATCGGGAAGAGATTGAGAAATTCGAGAAAAAGTTCAAGCCACGCCGAAAGAGGAAAGACAAGTATGAAAACTCAAAACTATCCCAAGGAAACATTGGGAATAAGTATTGGAATGCATGGATTTTAGCGATTTTTGTAAGCATTATAGGTATAGTAATAGTATATATGACTATTTCTGATTCAAGTATGCTTGAAATgatttcattttaa
Protein Sequence
MQKFKRAQAQNKLSIERHLEANISLNSSSEEEDETNEEDVQNVVDNVLLAYQGQGMDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCNKCYAFLHMSCILHWINDSLSYKRTKGITPIWACPKCRMEYNQDQIPRSYECFCKKTINPPYQPWIIPHSCGETCNKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPPQPRRCNAKNWSCGTICSKKYEFCLHTCNNLCHVGECPPCMETVLLNCHCKSNQKEGKCYEGTWMCERLCNRKFSCNVHTCESTCHLPDDCGNCPLEKNRCCPCGKKRYEVTCRQQQVPTCGDTCDKLLDCGSHFCNMRCHTDRCGHCLEVVTKACKCGSYTKEIACGKEFHCNKKCTQMRLCGKHLCNKKCCDCILKNTSNPCEKTCENMLNCRKHKCAAPCHSGPCYPCTRMDVIQCRCGSSKITVPCGTRKRIRPPPCNKSCKIPPVCHHSKRETHRCHQGPCPPCKKICSLTHKRCGHSCPVTCHTKVWVKVKANGVKAQPIGPWEKPGKDIMELKTLPCPPCEISVLVTCLGGHETRPWPCHMSKPSSCGRACGQLLPCKNHICELTCHKIQTSDDKSDSGTPCMECEKECQFARLPGCTHACPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVDLVSTTNKKRDELLKCGNQCPKNYSCGHRCINDCHPGECKGKEQCNKKVRLWCKCKRIKKDFLCLFLQKEQIIVECDNVCESLKIEKKEAQEAIIAKKREAEELRNREEIEKFEKKFKPRRKRKDKYENSKLSQGNIGNKYWNAWILAIFVSIIGIVIVYMTISDSSMLEMISF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
iTF_01245614;
80% Identity
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