Waur008790.1
Basic Information
- Insect
- Wasmannia auropunctata
- Gene Symbol
- nfxl1
- Assembly
- GCA_000956235.1
- Location
- NW:1340182-1344532[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 6.4e+03 -3.3 1.1 15 19 126 130 125 130 0.81 2 18 0.42 2.5e+03 -1.9 0.6 4 10 161 167 161 167 0.93 3 18 5.6e-08 0.00034 20.0 15.1 1 18 175 191 175 192 0.98 4 18 9.7e-07 0.0058 16.1 13.0 4 18 231 245 229 246 0.95 5 18 0.78 4.6e+03 -2.8 1.0 6 10 271 275 270 275 0.93 6 18 1.5e-05 0.088 12.3 12.3 1 19 281 300 281 300 0.93 7 18 0.00014 0.83 9.2 8.3 1 18 336 353 336 354 0.97 8 18 0.0049 29 4.2 7.3 1 12 388 399 388 399 0.94 9 18 1.2 6.9e+03 -3.4 1.4 6 10 409 413 408 413 0.88 10 18 9e-08 0.00054 19.4 12.9 1 19 419 437 419 437 0.91 11 18 0.00011 0.63 9.6 9.8 9 19 485 495 483 495 0.90 12 18 0.0018 11 5.6 7.4 1 12 505 515 505 515 0.95 13 18 0.86 5.2e+03 -2.9 5.8 14 18 548 552 548 553 0.89 14 18 0.00041 2.5 7.7 6.3 1 12 589 600 579 600 0.80 15 18 2 1.2e+04 -6.4 3.7 6 8 617 619 613 621 0.50 16 18 8.5e-05 0.51 9.9 16.7 2 19 630 646 629 646 0.92 17 18 0.0051 30 4.2 15.6 1 16 691 705 691 710 0.95 18 18 1.4 8.4e+03 -3.6 0.6 6 10 741 745 740 745 0.86
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAAAAGGGCTCAAGCACAGAATAAACTGTCTATCGAAAGGCACTTGGAAGCCAACGCATCGTTGAATTCGTCTAGCGAAGAGGAAGATGAGACAAATGAAGAAGAGGTCCAAAATGTGGTGGGCAAAGTATTGTCGGCGTACCAGGGACAGAGCACAGATGCGGAGAAAGTGATATCGTACTTGGTTAATTCCTTTCAAACCAGCAGCGCTGTttgtttaatatgtatatcaacTGTCAAGAAGATAGATCCGATATGGAACTGCGACAAATGCTACGCATTTCTACACATGTCCTGCATCCTGCACTGGATCAACGACAGTTTGAGCTACAAACGGGCTAAAGGAATCACACCGATCTGGGCATGTCCAAAATGCCGTATGGATTACGACCAGGATCAGATTCCAAGATCGTACAAGTGCTTCTGCAAAAAGACCGCGGATCCTCTGTATCAGCCGTGGGTTATTCCGCATTCCTGCGGCGAGGCCTGCGGCAAGCTCCTGCAACCAGAATGCGGTCACAAGTGCGTGCTGCTCTGCCATCCCGGTCCGTGTCCGCCCTGCGCCAAGATGGTGTCGGTTAAATGTTACTGCGGCAAGCTGCCGGCGCAACCGCGACGTTGCAACGCCAAAAATTGGAGCTGTGGAACTGTATGCAACCGAAAATACGAATCTTGCCCGCACACTTGTAACAGCCTGTGTCACACCGGAGAATGCAGCCCTTGCGTAGAGACAGTATTGTTGAAATGCCGTTGCAAGAGTAACGAGAGAGTAGGGAAGTGCTGCGAGGGCACGTGGATTTGCGAGAAACCTTGCAACAGGAGATTCTCTTGCAACGTACACAGCTGCGAGAGCACTTGTCATCTACCAGGCGATTGCGGCAACTGTCCCCTGGAGAAGAACAGATGCTGTCCTTGCGGGAAAAAACGGTACGATGTTTCCTGCAAGCGGCAACAGGTGCCGACGTGCGGTGATACGTGCGGCAAGTTGTTGGAATGCGGCTCGCACTTCTGCAACATGAGATGTCACACCGATCGGTGCGGCCAGTGCTTAGAGGTCGTAACGAAGGCGTGCCGATGCGGCAGTTACACGAAGGAGATCGCCTGCGCGAAGGAGTTCCACTGCAACAAGAAATGCATGCAGATGCGCTTGTGCGGTAGACATCTGTGCAACAGGAAGTGCTGCGATTGCATATCGAGGAACACGTCCAATCCCTGTGAGAAAACGTGCGAGAACGCGCTCAACTGCCGCAAGCACAAATGCGCCGCGCCTTGCCACAGCGGTCCCTGCTATCCGTGCACCAGAACGGACGTTATACAGTGCCGATGCGGCGGCAGCAGGATCACGGTGCCGTGCGGCACCAGGAAGAGAATCCGGCCACCGCCGTGCAACAAGTCGTGCAAGATCCCACCTATCTGCCACCACAGCAAGAGGGAGACGCACAAGTGTCATCAGGGCCCGTGTCCGCCGTGTAAAAAGGTCTGCGCGCTGACGCACAAGAGATGCGGCCACTCTTGCCCGGCCACCTGCCACACGAAGGTCTGGGTGAAGATTCGCGCGAACGGAGTGAAGGCGCAGCCTGTCGGGCCCTGGGAAAAACCTGGGAAGGACATCATGGAGCTGAAGACCTTGCCGTGTCCGCCGTGCGAGGTTTCCGTGCCTGTGACCTGCCTCGGCGGTCACGAGACGCGCCCTTGGCCGTGTCACATGTCGAAACCGAGCTCCTGCGGCAGACCTTGCGGCCAGCTATTACCGTGCAAGAATCACACCTGCGAGCTGACCTGTCACAAGCTACAGACGTCCGGCGACGAGTCCAACAACGGCGCTCCGTGCACGGAGTGCGAGAGGGAGTGCAGTTTCGCACGACCGCCAGGTTGCGCGCACACGTGCCCGCGACCTTGTCACCCGGCCCCGTGTAAACCGTGCAAGCAATTGGTACGAGTCTCCTGCCATTGCGGTATCAGCACCCTTTACCGGCACTGCGTCAACTTGACGTCTGCAACGAGCAAGGAACGGGATGAGTTACTCAAATGCGGAAACCAATGCccaaaaaatTATGCATGCGGCCACCGTTGCGTCAATGATTGCCATCCAGGGGAATGCAAAGGCGGGGAGGGCTGCAACAAGAAAGTCAGATTATGGTGTAAGTGTAAGCGGATCAAGAAGGACTTTCTTTGTTCGCATCTTCAAAAGGAGCATTTTACCGTGGAGTGCGACAGCGTATGCGAGTCATTGAAGAATGAGAGAAAAGAAGCCCAAGAAGCTATGATAGCGAAGAAGCTGGAAGAGGAGGAGCTGCGCAATCGGGAAGAGATCGAGAAATTCGAGAAGAAGTTCAAGCCGCGACGAAAGAGGAAAGACAAGTACGAGAATTCGAAACAGTTCAAGGAAAACGCGAGGAACAAGTATCGCAGCGCGTGGATTTTAGCGATTATCGTAAGCATTATAGGAATAATGATAGTTTATATGACCGCTCCTGACTTAAGTATACCTGGGTTGAGCTGA
- Protein Sequence
- MQKFKRAQAQNKLSIERHLEANASLNSSSEEEDETNEEEVQNVVGKVLSAYQGQSTDAEKVISYLVNSFQTSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLSYKRAKGITPIWACPKCRMDYDQDQIPRSYKCFCKKTADPLYQPWVIPHSCGEACGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTVCNRKYESCPHTCNSLCHTGECSPCVETVLLKCRCKSNERVGKCCEGTWICEKPCNRRFSCNVHSCESTCHLPGDCGNCPLEKNRCCPCGKKRYDVSCKRQQVPTCGDTCGKLLECGSHFCNMRCHTDRCGQCLEVVTKACRCGSYTKEIACAKEFHCNKKCMQMRLCGRHLCNRKCCDCISRNTSNPCEKTCENALNCRKHKCAAPCHSGPCYPCTRTDVIQCRCGGSRITVPCGTRKRIRPPPCNKSCKIPPICHHSKRETHKCHQGPCPPCKKVCALTHKRCGHSCPATCHTKVWVKIRANGVKAQPVGPWEKPGKDIMELKTLPCPPCEVSVPVTCLGGHETRPWPCHMSKPSSCGRPCGQLLPCKNHTCELTCHKLQTSGDESNNGAPCTECERECSFARPPGCAHTCPRPCHPAPCKPCKQLVRVSCHCGISTLYRHCVNLTSATSKERDELLKCGNQCPKNYACGHRCVNDCHPGECKGGEGCNKKVRLWCKCKRIKKDFLCSHLQKEHFTVECDSVCESLKNERKEAQEAMIAKKLEEEELRNREEIEKFEKKFKPRRKRKDKYENSKQFKENARNKYRSAWILAIIVSIIGIMIVYMTAPDLSIPGLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- iTF_01476621;
- 80% Identity
- -