Cflo008361.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Camponotus floridanus
Gene Symbol
nfxl1
Assembly
GCA_003227725.1
Location
NW:1454673-1458350[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1.1 6.4e+03 -3.3 1.1 15 19 126 130 125 130 0.81
2 17 0.15 8.7e+02 -0.5 0.8 4 10 161 167 160 167 0.95
3 17 5.6e-08 0.00034 20.0 15.1 1 18 175 191 175 192 0.98
4 17 1.2e-08 7e-05 22.2 11.5 1 18 229 245 229 246 0.94
5 17 0.4 2.4e+03 -1.9 0.8 6 10 271 275 270 275 0.90
6 17 0.0068 41 3.8 10.1 1 19 281 300 281 300 0.91
7 17 0.00065 3.9 7.0 7.2 1 18 336 353 336 354 0.96
8 17 0.0069 41 3.8 7.6 1 12 388 399 388 399 0.94
9 17 1.2 6.9e+03 -3.4 1.4 6 10 409 413 408 413 0.88
10 17 9e-08 0.00054 19.4 12.9 1 19 419 437 419 437 0.91
11 17 0.00014 0.82 9.2 9.4 10 19 486 495 483 495 0.90
12 17 0.0018 11 5.6 7.4 1 12 505 515 505 515 0.95
13 17 0.86 5.2e+03 -2.9 5.8 14 18 548 552 548 553 0.89
14 17 0.0021 13 5.4 8.0 1 12 589 600 579 600 0.88
15 17 2 1.2e+04 -5.6 3.4 14 18 613 617 613 621 0.59
16 17 0.00073 4.4 6.9 17.0 3 19 630 646 629 646 0.92
17 17 9.9e-05 0.59 9.6 13.2 1 16 691 705 691 711 0.85

Sequence Information

Coding Sequence
ATGCAAAAATTTAGGAGAGCTCAAGCACAAAATAAGTTGTCCATCGAAAGACACTTGGAGGCCAACATGTCATTAAATTCATCTAGTGAAGAAGAAGATGAAACAAATGAAGAAGATGTTCAAAATGTAGTGGGCAAAGTATTGTCAGCATATCAGGGACAAAGCACGGATGCAGAGAAAGTGATATCatacttaattaattctttccaATCAAGTAGCGCTGTTTGTTTGATATGCATATCAACTGTCAAGAAGATAGATCCGatatggAACTGTAACAAATGTTATGCATTTTTGCACATGTCCTGCATCTTACGTTGGATTAATGACAGTTTAAGTTACAAACAGGCTAAAGGAATCATACCAATCTGGGCATGcCCAAAATGTCGCATGGAATATAACCAGGATCAGATTCCAAGATCATATGAATGTTTCTGTAAAAAGACTATAAATCCTCCATATCAACCCTGGATAATTCCACATTCTTGTGGCGAAACTTGTAGCAAGCTCTTACAACCAGAATGTGGTCACAAATGTGTATTGCTCTGTCATCCTGGCCCATGCCCACCATGTGCAAAGATGGTGTCGGTCAAATGCTATTGTGGCAAGCTACTGCCGCAGCCACGTCGTTGTAATGCTAAAAATTGGAGTTGTGGAACAgtatgtgataaaaaatatgaattttgcTCGCACACTTGTAATAACTTGTGTCATGCTGGAGAATGTCCCCCTTGTATGGAAATAGTATCACTGAAATGCCACTGTAAGAGTAATCAAAAGGAAGGAAAATGCTATGAAGGTACGTGGAGTTGTGAGAGACTTTGTAATAGAAAATTCTCTTGTAATGTACATATTTGTGAGAGTACATGTCACTTACCCGATGATTGCGGTAATTGTCCACTGGAGAAGAATAGATGTTGTCCTTGCGGGAAAAAACGATACGATGTTTCGTGCAGGCAGCAACAAGTACCAACGTGCGGCGATACTTGCGGGAAATTGTTAGACTGTGGATCACATTTCTGCAATATGAGATGCCATATTGATCGTTGTGGTCAGTGTCTGGAAGTAATAACAAAAGCTTGCAGATGCAGCAGTTATACAAAAGAGATTGCTTGTGGAAAAGAATTTCACTGCAACAAGAAATGTACACAAATGCGCTTATGTGGCAGACAcctatgtaataaaaaatgttgcgATTGCATATTGAAGAATACATCCAATCCCTGTGAAAAAACGTGCGAAAATATGCTTAATTGTCGGAAGCACAAGTGCGCCGCACCTTGCCACAGTGGTCCTTGCTATCCATGCACGAGAATGGACACTGTACAATGTCGATGCGGCAGTAGTAAAATAACAGTGCCATGCGGTACCAGGAAAAGAATCAAACCGCCACCATGTAATAAATCCTGTAAAATTCCGCCTGATTGTCATCACAACAAAAGGGAAACTCATAGATGTCATCAAGGACCTTGTCCACCATGCAAAAAGATCTGCGGCTTGATACACAAAAGATGCGGTCATTCTTGTCCAGCCACTTGTCACACGAAGGTCTGGGTGAAGGTCAAAGCGAACGGAGTAAAAGCACAACCTATTGGACCTTGGGAAAAACCTGGTAAAGACATTATGGAATTGAAGACTTTACCATGTCCACCATGTGAAATTTCCGTGCTCGTGACCTGTCTCGGCGGTCATGAGACGCGTCCCTGGCCGTGTCACATGTCAAAGCCAAGCTCTTGCGGCAGGGCTTGTGACCAACTATTGCCGTGTAAAAATCATACCTGCGAATTGACCTGTCATAAGATACAAACTTCTGATAACAAATCAGACAGTGGTATACCATGTATGGAATGCGAGAAGGAATGCCAATTCGTACGTTTATCGGGTTGTACGCACGCATGTCCGGAACCTTGTCATCCAGCGCCTTGCAAACCGTGCAAGCAATTGGTGCGAATCTCTTGTCACTGTGGTATTAGTACCCTTTACCGACATTGTGTAGACTTGATAACTGCGACAAATAAGAAACATGATGAATTACTCAAATGTGGAAACCAGTGtccaaaaaatTATTCATGCGGCCACCGTTGCATTAATGATTGCCATCCAGGAGAGTGCAAAGGACAGGAGCAATGTAGCAAGAAAGTTAGATTATGGtgtaaatgtaaaagaattaaaaaggaCTTTCTTTGTTTGCGTCTTCAAAAGGAGCAAATTACTGTAGAATGCGATAATGTGTGCGAATCATTGAAGATTGAGAAAAAGGAGGCTCAAGAAGCTATTATAGCAAAGAAACGAGAAGCAGAAGAGTTACGTAATCGGGaagaaattgagaaatttgaaaaaaagttcAAGCCACGCCGAAAGAGGAAAGATAAGtatgaaaattcgaaattatcCCAAGGAAACATGGGGAATAATTGTTGGAATACATGGATTTTAGCGATTGTTGTAAGCATTATAGGTATAGTAATAGTATATATGATTTCTTTTGATTCAAGTATGCTTAAAATGAGTTGA
Protein Sequence
MQKFRRAQAQNKLSIERHLEANMSLNSSSEEEDETNEEDVQNVVGKVLSAYQGQSTDAEKVISYLINSFQSSSAVCLICISTVKKIDPIWNCNKCYAFLHMSCILRWINDSLSYKQAKGIIPIWACPKCRMEYNQDQIPRSYECFCKKTINPPYQPWIIPHSCGETCSKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLLPQPRRCNAKNWSCGTVCDKKYEFCSHTCNNLCHAGECPPCMEIVSLKCHCKSNQKEGKCYEGTWSCERLCNRKFSCNVHICESTCHLPDDCGNCPLEKNRCCPCGKKRYDVSCRQQQVPTCGDTCGKLLDCGSHFCNMRCHIDRCGQCLEVITKACRCSSYTKEIACGKEFHCNKKCTQMRLCGRHLCNKKCCDCILKNTSNPCEKTCENMLNCRKHKCAAPCHSGPCYPCTRMDTVQCRCGSSKITVPCGTRKRIKPPPCNKSCKIPPDCHHNKRETHRCHQGPCPPCKKICGLIHKRCGHSCPATCHTKVWVKVKANGVKAQPIGPWEKPGKDIMELKTLPCPPCEISVLVTCLGGHETRPWPCHMSKPSSCGRACDQLLPCKNHTCELTCHKIQTSDNKSDSGIPCMECEKECQFVRLSGCTHACPEPCHPAPCKPCKQLVRISCHCGISTLYRHCVDLITATNKKHDELLKCGNQCPKNYSCGHRCINDCHPGECKGQEQCSKKVRLWCKCKRIKKDFLCLRLQKEQITVECDNVCESLKIEKKEAQEAIIAKKREAEELRNREEIEKFEKKFKPRRKRKDKYENSKLSQGNMGNNCWNTWILAIVVSIIGIVIVYMISFDSSMLKMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
iTF_01245614;
80% Identity
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