Basic Information

Insect: Lasius niger
Gene Symbol: nfxl1
Assembly: GCA_001045655.1
Location: LBMM01002469.1:17747-22344[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.54 9.6e+03 -3.3 1.1 15 19 126 130 125 130 0.81

2 17 0.073 1.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95

3 17 2.8e-08 0.0005 20.0 15.1 1 18 175 191 175 192 0.98

4 17 5.3e-06 0.095 12.7 10.6 4 18 231 245 229 246 0.95

5 17 0.032 5.7e+02 0.7 0.3 5 10 270 275 267 275 0.91

6 17 0.001 18 5.4 10.5 1 19 281 300 281 300 0.92

7 17 7e-05 1.2 9.2 8.3 1 18 336 353 336 354 0.97

8 17 0.0059 1.1e+02 3.0 8.0 1 12 388 399 388 399 0.94

9 17 0.95 1.7e+04 -4.0 1.6 6 10 409 413 409 413 0.95

10 17 4.5e-08 0.00081 19.4 12.9 1 19 419 437 419 437 0.91

11 17 6.9e-05 1.2 9.2 9.4 10 19 486 495 483 495 0.90

12 17 0.00092 17 5.6 7.4 1 12 505 515 505 515 0.95

13 17 0.43 7.7e+03 -2.9 5.8 14 18 548 552 548 553 0.89

14 17 0.00098 18 5.5 8.5 1 12 589 600 579 600 0.80

15 17 1 1.8e+04 -5.6 3.4 14 18 613 617 613 621 0.59

16 17 0.0026 46 4.2 19.2 3 19 630 646 629 646 0.92

17 17 4.2e-05 0.75 9.9 12.9 1 16 691 705 691 711 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.54	9.6e+03	-3.3	1.1	15	19	126	130	125	130	0.81
2	17	0.073	1.3e+03	-0.5	0.8	4	10	161	167	160	167	0.95
3	17	2.8e-08	0.0005	20.0	15.1	1	18	175	191	175	192	0.98
4	17	5.3e-06	0.095	12.7	10.6	4	18	231	245	229	246	0.95
5	17	0.032	5.7e+02	0.7	0.3	5	10	270	275	267	275	0.91
6	17	0.001	18	5.4	10.5	1	19	281	300	281	300	0.92
7	17	7e-05	1.2	9.2	8.3	1	18	336	353	336	354	0.97
8	17	0.0059	1.1e+02	3.0	8.0	1	12	388	399	388	399	0.94
9	17	0.95	1.7e+04	-4.0	1.6	6	10	409	413	409	413	0.95
10	17	4.5e-08	0.00081	19.4	12.9	1	19	419	437	419	437	0.91
11	17	6.9e-05	1.2	9.2	9.4	10	19	486	495	483	495	0.90
12	17	0.00092	17	5.6	7.4	1	12	505	515	505	515	0.95
13	17	0.43	7.7e+03	-2.9	5.8	14	18	548	552	548	553	0.89
14	17	0.00098	18	5.5	8.5	1	12	589	600	579	600	0.80
15	17	1	1.8e+04	-5.6	3.4	14	18	613	617	613	621	0.59
16	17	0.0026	46	4.2	19.2	3	19	630	646	629	646	0.92
17	17	4.2e-05	0.75	9.9	12.9	1	16	691	705	691	711	0.85

Sequence Information

Coding Sequence: ATGCAGAAGTTTAAGAGAGCTCAAGCGCAAAATAAGTTGTCTATCGAAAGACACTTGGAGGccaatatgttattaaattcatCTAGTGAAGAGGAAGATGAAACAAATGAGGAAGATGTCCAAAATGTGGTGGGCAAAGTATTGTTGGCATATCAGGGACAAAGCATGGATGCAGAAAAAGTGATATCGTACTTGGTTAATTCTTTCCAATCAAGTAGCGCTGTTTGCTTGATATGTATATCAACTGTCAAAAAGATAGATCCGATATGGAACTGCAACAAATGCTATGCATTTCTGCACATGTCCTGCATCTTACACTGGATCAATGACAGTTTGAGTTACAAACGGGCTAAAGGAATCACACCAATCTGGGCATGCCCAAAATGTCGCATGGATTATGACCAAAACCAGATTCCAAGATTGTACGAATGTTTCTGTAAAAAGATCAAAGATCCTCCGTATCAACCCTGGATTATTCCGCATTCCTGTGGCGAAACCTGTGGCAAACTCTTACAACCAGAGTGTGGTCACAAATGTGTGTTGCTCTGTCATCCTGGTCCGTGTCCGCCGTGCGCGAAGATGGTGTCAGTCAAATGCTATTGTGGCAAACTACTACCACAGCCACGTCGTTGTAATGCTAAAAATTGGAGTTGTGGAACAATatgcaacaaaaaatatgaattttgctTGCACACTTGTAATAACTTGTGTCATGCTGAAGAGTGTCCTCCTTGTATAGAAACAGTATTACTGAAATGCCGTTGTAAGAGTAGCCAAAAGGAAGGAAAATGTTACGAGGGTACATGGACTTGTGAGAGACCCTGTAACAGAAGATTCTCCTGCAATGTACATGCCTGCGAGAGCACTTGTCACTTACCTGATGATTGCGGTAATTGTCCATTGGAGAAGAACAGATGTTGTCCTTGCGGAAAGAAACGATACGATGTTTCATGCAGGCAGCAGCAAGTGCCAACGTGCGGCGATACTTGCGGCAAATTGTTAGACTGCGGATCACACTTCTGCAACATGAGATGCCATACCGATCGTTGTGGTCAGTGCCTGGAAGTGGTAACAAAAGCCTGCAGATGCGGCAGTTACACCAAAGAGATTGCTTGCGTAAAAGAATTTCACTGCAACAAGAAATGCACTCAAATGCGCTTGTGCGGCAAACAcctgtgtaataaaaaatgttgcgaTTGCGTATCGAAGAATACATCTAATCTCTGTGAGAAAACGTGCGAAAATACGCTTAATTGTCGAAAGCACAAGTGTGCCGCACCCTGCCATAGCGGTCCTTGCTATCCATGCACACGAATGGACGTCGTGCAGTGTCGATGCGGCAGCAGTAAAATAACGGTGCCGTGCGGTACCAGAAAGAGAATCAGGCCGCCGCCGTGTAACAAATCCTGCAAAATTCCGCCTGTCTGTCATCACAGCAAGAGGGAGACGCATAGATGTCATCAAGGTCCGTGTCCGCCGTGCAAAAAGATTTGCGGCTTGACGCACAAGAGATGCGGTCACTCTTGTCCAGCCACTTGTCATACGAAGGTCTGGGTGAAGGTCAAAGCGAACGGAGTAAAGACGCAGCCCATTGGACCTTGGGAGAAGCCTGGGAAGGACATTATGGAGTTGAAGACCTTACCGTGTCCACCGTGTGAGATTTCCGTGCTCGTGATCTGTCTCGGCGGTCATGAGACGCGTCCCTGGCCGTGTCACATGTCAAAACCGAGCTCCTGTGGCAGAGCTTGCGGCCGACTACTGCCGTGTAAAAATCACACCTGCGAATTGACCTGTCATAAGTTACAAACTTCTGGTGACAACTCGAACAGCGGTACGCCGTGTATGGAATGCGAGAAGGAATGCCAATTCGCACGTTTACCAGGTTGTACGCATCCATGTCCACAACCTTGTCATCCGGCGCCTTGCAAACCGTGCAAGCAATTGGTGCGAATCTCTTGTCATTGTGGTATTAGTACTCTTTACCGACACTGTGTAAATCTGATGTCCGCGACGAATAAGGAACGCGACGAATTACTCAAATGTGGAAACCAGTGTCCAAAAAATTATTCGTGCGGCCACCGTTGCATCAACGATTGCCATCCAGGAGAATGCAAAGGAGAGGAGCAATGCAGCAAGAAAGTTAGATTATGGTGTAAATGTAAAAGGATCAAGAAGGATTTTCTTTGTTTGCTTCTTCAAAAGGAGCAGATTACTGTAGAATGTGATAATGTGTGTGAATCGttgaaaaatgagagaaaggaGGCCCAGGAAGCTATTATAGCAAAGAAACGAGAGGCGGAAGAGCTACGTAATCGGGAAGAGGTTgagaaattcgagaaaaagtTCAAGCCACGTCGAAAGAAGAAAGACAAATATGAAAACTTGAAACTATCCCAAAGAAATATGGGGAATAAGTGTTGGAACACATGGATTTTAGCGATTGTTGTAAGCATTATAGGTATAGTAATAGTATATATGACTTCTTCTGATTCAAATATACTTGAAATGAGTTGA
Protein Sequence: MQKFKRAQAQNKLSIERHLEANMLLNSSSEEEDETNEEDVQNVVGKVLLAYQGQSMDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCNKCYAFLHMSCILHWINDSLSYKRAKGITPIWACPKCRMDYDQNQIPRLYECFCKKIKDPPYQPWIIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLLPQPRRCNAKNWSCGTICNKKYEFCLHTCNNLCHAEECPPCIETVLLKCRCKSSQKEGKCYEGTWTCERPCNRRFSCNVHACESTCHLPDDCGNCPLEKNRCCPCGKKRYDVSCRQQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVVTKACRCGSYTKEIACVKEFHCNKKCTQMRLCGKHLCNKKCCDCVSKNTSNLCEKTCENTLNCRKHKCAAPCHSGPCYPCTRMDVVQCRCGSSKITVPCGTRKRIRPPPCNKSCKIPPVCHHSKRETHRCHQGPCPPCKKICGLTHKRCGHSCPATCHTKVWVKVKANGVKTQPIGPWEKPGKDIMELKTLPCPPCEISVLVICLGGHETRPWPCHMSKPSSCGRACGRLLPCKNHTCELTCHKLQTSGDNSNSGTPCMECEKECQFARLPGCTHPCPQPCHPAPCKPCKQLVRISCHCGISTLYRHCVNLMSATNKERDELLKCGNQCPKNYSCGHRCINDCHPGECKGEEQCSKKVRLWCKCKRIKKDFLCLLLQKEQITVECDNVCESLKNERKEAQEAIIAKKREAEELRNREEVEKFEKKFKPRRKKKDKYENLKLSQRNMGNKCWNTWILAIVVSIIGIVIVYMTSSDSNILEMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476621;
90% Identity: iTF_01245614;
80% Identity: -