Agra020921.1
Basic Information
- Insect
- Anoplolepis gracilipes
- Gene Symbol
- nfxl1
- Assembly
- GCA_031304115.1
- Location
- JAPWJP010001596.1:44022-47032[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 2.4e+04 -3.3 1.1 15 19 126 130 125 130 0.81 2 18 0.15 3.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 18 5.6e-08 0.0013 20.0 15.1 1 18 175 191 175 192 0.98 4 18 1.1e-07 0.0024 19.1 8.8 4 18 231 245 229 246 0.94 5 18 0.19 4.2e+03 -0.8 1.4 5 10 270 275 270 275 0.95 6 18 0.0068 1.5e+02 3.8 10.1 1 19 281 300 281 300 0.91 7 18 0.00065 14 7.0 7.2 1 18 336 353 336 354 0.96 8 18 0.012 2.6e+02 3.0 8.0 1 12 388 399 388 399 0.94 9 18 1.2 2.6e+04 -3.4 1.4 6 10 409 413 408 413 0.88 10 18 9e-08 0.002 19.4 12.9 1 19 419 437 419 437 0.91 11 18 0.00014 3.1 9.2 9.4 10 19 486 495 483 495 0.90 12 18 0.0018 41 5.6 7.4 1 12 505 515 505 515 0.95 13 18 0.86 1.9e+04 -2.9 5.8 14 18 548 552 548 553 0.89 14 18 0.002 44 5.5 8.5 1 12 589 600 579 600 0.80 15 18 2 4.5e+04 -5.6 3.4 14 18 613 617 613 621 0.59 16 18 0.00028 6.2 8.2 16.1 3 19 630 646 629 646 0.92 17 18 7e-05 1.6 10.1 12.3 1 16 691 705 691 711 0.85 18 18 1.4 3.1e+04 -3.6 0.6 6 10 741 745 740 745 0.86
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAAGAGAGCTCAAGCACAAAATAAGTTGTCCATCGAAAGACACTTGGAGGCCAATATGTCATTAAATTCATCTAGCGAAGAAGAAGATGAAACAAATGAGGAAGATGTCCAAAATGTGGTAGATAAAGTATTGTTGGCATATCAGGGACAAGGCACAGATGCAGAAAAAGTGATATCATACTTAGTTAATTCTTTCCAATCAAGTAGTGCTGTTTGCCTGATATGTATATCAACTGTCAAAAAGATAGATCCGATATGGAACTGCGACAAATGCTATGCATTTCTACACATGTCGTGTATCCTACACTGGATCAATGACAGTTTGAGCTACAAACGGGCTAAAGGAATCACACCGATCTGGGCATGCCCAAAATGTCGCATGGAATATGACCAGGATTATATACCAAGATCGTACGAGTGTTtctgtaaaaagattataaatccTCCGTATCAACCCTGGATTATCCCTCATTCTTGTGGTGAAACCTGTGGTAAGCCCTTACAGCCAGAGTGTGGTCACAAATGTGTATTGCTCTGTCATCCTGGTCCATGCCCACCATGTGCAAAGATGGTATCAGTCAAATGCTATTGCGGCAAACTACCGCCGCAGCCACGTCGTTGCAATGCTAAAAATTGGAGTTGTGGAACAATAtgcaacaaaaaatatgaattttgctTACACACTTGTAATAACTTGTGTCATGTTGGAGAGTGTCTCCCTTGTATGGAAACAGTATTACTGAAATGCCGTTGTAAGAGTAACCAAAAGGAAGGAAAATGCTACGAAGATACGTGGACTTGCGAGAGACCTTGTAACAGAAAATTTTCCTGCAATGTACATATCTGCGAGAGTACTTGTCACTTACCTGATGATTGCGGTAATTGTCCACTGGAAAAGAACAGATGTTGTCCTTGTGGGAAGAAACGATACGAAGTTTTATGCAGGCAACAGCAAGTGCCAACGTGCGGCGATACTTGTGGCAAATTGTTAGACTGTGGATCACACTTTTGCAACATGAGGTGCCATATTGATCGTTGTGGTCAGTGCTTAGAAGTGGTAACAAAAGCCTGTAGATGTGGCAGTTATACCAAAGAGATTGCTTGTGGAAAAGAATTTCACTGCAACAAAAAATGTACACAAATGCGTTTGTGTGGCAAACatctgtgtaataaaaaatgttgcgATTGCATATCGAAGAATACATCTAATCCCTGCGAGAAGACGTGCGAAAATATGCTTAATTGTCGGAAACACAAGTGCGCCGCACCCTGTCATAGCGGTCCTTGTTATCCATGCACAAGAATGGATACCGTGCAGTGTCGGTGTGGCAATAGCAAAATAACAGTACCATGTGGTACCAGAAAGAGAATCAAACCGCCGCCGTGCAACAAATCTTGCAAAATTCCTCCTGTCTGTCATCATAGCAAGAGAGAAACCCACAGATGTCATCAGGGCCCGTGTCCGCCGTGCAAAAAGATTTGTGGCTTGACGCACAAGAGATGTGGTCACTCTTGCCCAGCTACTTGTCACACAAAGGTCTGGGTGAAGGTCAACACAAACGGAGTAAAAACACAGCCTATTGGACCTTGGGAAAAGCCTGGGAAAAACATTATGGAATTGAAGACTTTACCGTGCCCACCATGTGAAATTTCTATGCCTGTGACCTGTCTCGGTGGTCATGAGATGCGTCCTTGGCCGTGTCATATGTCGAAACCGAGCTCCTGTGGCAGAGCTTGCGGTCGATTACTGCCGTGTAAAAATCATACCTGTGAGTTGACTTGCCATAAGATACAAACTTCTGGTGACAAATCGGACAGCGGTACGCCGTGTATGGAATGCGAGAAGGAATGCCAGTTTGCACGTTTACCGGGTTGTACACATGCATGTTCACAACCTTGTCATCCTGCGCCTTGCAAACCGTGCAAGCAATTGGTGCGAGTCTCTTGCCATTGTGGTATTAGTACCCTTTATCGACACTGTGTAGACTTGATGACCGCTACGAATAAGAAACGCGACGAGTTACTTAAATGTGGAAACCAGTGTccaaaaaattattcgTGCGGCCACCGTTGTATCAACGATTGCCATTCAGGAGAATGTAAAGGACAGGAGCAGTGCAGCAAGAAAGTTAGATTATGgtgtaaatgtaaaagaatCAAAAAGGATTTCCTTTGTTTGCTTCTTCAAAAGGAGAAGATTACTATAGAATGCGATAGTGTGTGCGAGTcattgaaaaaagagaaaaaggaggcCCAAGAAGCTATTGTAGCAAAGAAACGAGAAGCAGAGGAGCTACGTAATCGGGAAGAGATTgagaaatttgagaaaaaattcaaaccgCGCCGAAAGAGGAAAGACAAGTATGAAAATTCGAAACTATCCCAAGGAAACATGGGAAATAAGTATTGGAATGCATGGATTTTAGCGATTATTATAAGCATTAtaggtataataataatatatacaacttCTTCTGACTCAAGTATACTTGAAATAAGTTGA
- Protein Sequence
- MQKFKRAQAQNKLSIERHLEANMSLNSSSEEEDETNEEDVQNVVDKVLLAYQGQGTDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLSYKRAKGITPIWACPKCRMEYDQDYIPRSYECFCKKIINPPYQPWIIPHSCGETCGKPLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPPQPRRCNAKNWSCGTICNKKYEFCLHTCNNLCHVGECLPCMETVLLKCRCKSNQKEGKCYEDTWTCERPCNRKFSCNVHICESTCHLPDDCGNCPLEKNRCCPCGKKRYEVLCRQQQVPTCGDTCGKLLDCGSHFCNMRCHIDRCGQCLEVVTKACRCGSYTKEIACGKEFHCNKKCTQMRLCGKHLCNKKCCDCISKNTSNPCEKTCENMLNCRKHKCAAPCHSGPCYPCTRMDTVQCRCGNSKITVPCGTRKRIKPPPCNKSCKIPPVCHHSKRETHRCHQGPCPPCKKICGLTHKRCGHSCPATCHTKVWVKVNTNGVKTQPIGPWEKPGKNIMELKTLPCPPCEISMPVTCLGGHEMRPWPCHMSKPSSCGRACGRLLPCKNHTCELTCHKIQTSGDKSDSGTPCMECEKECQFARLPGCTHACSQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVDLMTATNKKRDELLKCGNQCPKNYSCGHRCINDCHSGECKGQEQCSKKVRLWCKCKRIKKDFLCLLLQKEKITIECDSVCESLKKEKKEAQEAIVAKKREAEELRNREEIEKFEKKFKPRRKRKDKYENSKLSQGNMGNKYWNAWILAIIISIIGIIIIYTTSSDSSILEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- iTF_01245614;
- 80% Identity
- -