Chis021625.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cataglyphis hispanica
Gene Symbol
nfxl1
Assembly
GCA_004195275.1
Location
SGAY01011224.1:390-3402[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.1 1.6e+04 -3.2 1.1 15 19 126 130 125 130 0.81
2 16 0.15 2.2e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 16 5.6e-08 0.00085 20.0 15.1 1 18 175 191 175 192 0.98
4 16 2.6e-08 0.00039 21.1 11.0 4 18 231 245 229 246 0.94
5 16 0.0018 27 5.6 9.8 1 19 281 300 281 300 0.94
6 16 0.00014 2.1 9.2 8.3 1 18 336 353 336 354 0.97
7 16 0.012 1.8e+02 3.0 8.0 1 12 388 399 388 399 0.94
8 16 1.9 2.9e+04 -4.0 1.6 6 10 409 413 409 413 0.95
9 16 4.2e-07 0.0064 17.2 13.6 1 19 419 437 419 437 0.91
10 16 0.00014 2.1 9.2 9.4 10 19 485 494 482 494 0.90
11 16 0.011 1.7e+02 3.1 8.5 1 12 504 514 504 514 0.95
12 16 0.63 9.6e+03 -2.5 5.8 14 19 547 552 547 552 0.90
13 16 0.0017 25 5.7 8.0 1 12 588 599 578 599 0.80
14 16 2 3e+04 -5.5 3.5 5 10 615 620 612 620 0.61
15 16 0.00086 13 6.7 17.4 3 19 629 645 628 645 0.92
16 16 0.00015 2.2 9.1 12.8 1 16 690 704 690 710 0.88

Sequence Information

Coding Sequence
ATGCAGAAGTTTAAGAGAGCTCaagcgcaaaataaattgtctaTCGAAAGACATTTGGAAGCTAACACATTATTAAATTCGTCTAGTGAAGAGGAAGATGAAACAAATGAGGAAAATGTCCAAAATGTGGTGGGCAAAGTATTATTGGCATATCAAGGACAAGGCATGGATGCAGAAAAAGTGATATCATATTTAGttaattcttttcaatcaAGTAGTGCTGTTTGCTTGATATGTATATCAACTGTCAAAAAGATAGATTCGATATGGAACTGCAATAAATGCTATGCATTTTTGCATATGTCCTGCATCTTACATTGGATTAATGACAGTTTAAGTTATAAACGAGCTAAAGGAATCACACCAATCTGGGCATGCCCAAAATGTCGCATGGAATATGACCAGGACCAGATTCCAAGGTTGTATGAATGCTTCTGTAAAAAGATTACAAATCCTCCATATCAACCCTGGATTATCCCGCATTCTTGTGGCGAAACTTGTGACAAATTCTTACAACCAGAGTGTGGTCATAAATGTGTGTTGCTCTGTCATCCTGGACCATGCCCACCATGTGCAAAGATGGTGTCGGTCAAATGTTATTGCGGTAAGCTACCGCCGCAGCCACGTCGTTGCAATGCTAAAAATTGGAGTTGTGGAACAAtatgcaacaaaaaatatgaattttgctTGCacacttgtaataatttatgtcatGCTGGAGAATGCCCGCCTTGTATGGAAACAGTATTACTGAAATGCCATTGTGAGAGTAACCAAAAGGAAGGAAAATGCTATGAAGGTACATGGATTTGCAACAGACTTTGTAACAGAAGATTCTCCtgcaatatacatatctgCGAGAGTACTTGTCACTTACCCGATGATTGTGGTAATTGTCCATTGGAGAAGAACAGATGTTGTCCTTGTGGGAAGAAACGATATGAAGTTTCTTGCAGACAGCAACAAGTACCAACATGTGGCGATACTTGTGGCAAATTATTAGATTGTGGATCACACTTTTGCAACATGAGATGCCACACCGATCGTTGTGGTCAGTGCCTAGAAGTGATAACAAAAGCCTGCAGATGTGGTAATTACACCAAAGAGATTGCTTGTGGAAAAGAATTTCACTGCAACAAAAAATGCACACAAATGCGCTTGTGTGGCAAAcatttgtgtaataaaaaatgttgcgATTGCATATTGAAGAATACATCTAATCTTTGCGAAAAAACGTGCGAAAATATGCTCAATTGTCGAAAACACAAGTGTGCTACACCCTGCCATAGCGGTCCTTGTTATCCATGCACAAGAATGGACGTCGTGCAGTGTCGATGCGGCAATAGCAAAATAACGGTACCATGTGGTACCAGAAAAAGAAGGCCGCCGCCGTGTAATAAATCCTGCAAAATTCCGCCTGTCTGTCATCACAGTAAGAGAGAAACTCACAGATGTCATCAAGGCCCGTGTCCGCCGTGCAAAAAAATCTGCGGCTTAACGCACAAAAGATGCGGTCACTCTTGCCCAACCACTTGTCACACGAAAGTGTGGGTGAAGGTGAAAGCGAACGGAGTAAAAGCGCAACCCATTGGACCTTGGGAAAAGCCTGGAAAGGATATTATGGAGTTAAAGACTTTACCATGTCCACCATGTAAAGTTTCCATGCTTGTGACCTGTCTCGGAGGTCATGAGACGCGTCCCTGGCCGTGTCACATGTCAGAATCGAGTTCCTGCGGCAGAGCTTGCGGCCGATTATTGCCGTGTAAAAATCACACCTGCGAGTTGATCTGTCATAAGATACAAACTTCTGATGACAAATCAGATAGTGGTATGCCATGCATGAAATGCGAGAAGGAGTGTCAATTCGCTCGTTTACCAGGTTGTACACACGCATGTCCGCAACCATGTCATCCGGCGCCTTGCAAACCGTGCAAGCAATTAGTGCGAGTGTCTTGTCACTGTGGTATTAGCACCCTTTATCGACACTGTGTAGACTTGGTATCCACGACGAATAAGAAACGTGACGAATTACTCAAATGTGGAAACCAATGTCCAAAAAATTATTCGTGCGGTCACCGTTGCATTAACGATTGTCATCCAGGAAAATGCAAAGGAGAGGAACAATGTAACAAGAAAGTTAGATTATGGTGTAAAtgtaaaaggattaaaaaggATTTTCTTTGTTTGCTCCTTCAAAAAGAACAGATTACTGTAGAATGTGATAATGTGTGTGAATCattgaaaattgagaaaaaggaGGCCCAAGAAGCTATTACAGCAAAGAAACGAGAAGCGGAGGAGCTTCGCAATCGAgaagagattgaaaaattcgagaaaaagtTCAAGCCACGTCGAAAGAGGAAAGACAAGTATGAAAACTCAAAACTATCCCAAGGAAACATTAGGAATAAGTATTGGAATGCATggttttttgcgatttttgtaAGCATTATAGGTATAGTAATAGCATATATGACTGTTTCTGATTCAAGTATGCTTGAATTgagttga
Protein Sequence
MQKFKRAQAQNKLSIERHLEANTLLNSSSEEEDETNEENVQNVVGKVLLAYQGQGMDAEKVISYLVNSFQSSSAVCLICISTVKKIDSIWNCNKCYAFLHMSCILHWINDSLSYKRAKGITPIWACPKCRMEYDQDQIPRLYECFCKKITNPPYQPWIIPHSCGETCDKFLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPPQPRRCNAKNWSCGTICNKKYEFCLHTCNNLCHAGECPPCMETVLLKCHCESNQKEGKCYEGTWICNRLCNRRFSCNIHICESTCHLPDDCGNCPLEKNRCCPCGKKRYEVSCRQQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVITKACRCGNYTKEIACGKEFHCNKKCTQMRLCGKHLCNKKCCDCILKNTSNLCEKTCENMLNCRKHKCATPCHSGPCYPCTRMDVVQCRCGNSKITVPCGTRKRRPPPCNKSCKIPPVCHHSKRETHRCHQGPCPPCKKICGLTHKRCGHSCPTTCHTKVWVKVKANGVKAQPIGPWEKPGKDIMELKTLPCPPCKVSMLVTCLGGHETRPWPCHMSESSSCGRACGRLLPCKNHTCELICHKIQTSDDKSDSGMPCMKCEKECQFARLPGCTHACPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVDLVSTTNKKRDELLKCGNQCPKNYSCGHRCINDCHPGKCKGEEQCNKKVRLWCKCKRIKKDFLCLLLQKEQITVECDNVCESLKIEKKEAQEAITAKKREAEELRNREEIEKFEKKFKPRRKRKDKYENSKLSQGNIRNKYWNAWFFAIFVSIIGIVIAYMTVSDSSMLELS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
iTF_01245614;
80% Identity
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