Tame011093.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax americanus
Gene Symbol
nfxl1
Assembly
GCA_030770215.1
Location
JASTWO010000118.1:70852-73912[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.1 2.2e+04 -3.3 1.1 15 19 126 130 125 130 0.81
2 16 0.42 8.5e+03 -1.9 0.6 4 10 161 167 161 167 0.93
3 16 5.6e-08 0.0011 20.0 15.1 1 18 175 191 175 192 0.98
4 16 9.7e-07 0.02 16.1 10.9 4 18 231 245 229 246 0.94
5 16 1.5 3.1e+04 -3.7 1.7 6 10 271 275 271 275 0.93
6 16 1.5e-05 0.3 12.3 12.3 1 19 281 300 281 300 0.93
7 16 0.00014 2.8 9.2 8.3 1 18 336 353 336 354 0.97
8 16 0.0069 1.4e+02 3.8 7.6 1 12 388 399 388 399 0.94
9 16 0.93 1.9e+04 -3.0 1.2 6 10 409 413 408 413 0.91
10 16 9e-08 0.0018 19.4 12.9 1 19 419 437 419 437 0.91
11 16 0.00011 2.1 9.6 9.8 9 19 485 495 483 495 0.90
12 16 0.0047 96 4.3 7.5 1 12 505 515 505 515 0.95
13 16 0.86 1.8e+04 -2.9 5.8 14 18 547 551 547 552 0.89
14 16 0.0017 35 5.7 8.3 1 12 588 599 578 599 0.82
15 16 0.031 6.4e+02 1.7 16.0 3 19 629 646 628 646 0.90
16 16 0.00044 9 7.6 12.1 1 16 691 705 691 709 0.97

Sequence Information

Coding Sequence
ATGCAGAAATTTAAGAGGGCTCAAGCGCAGAATAAACTGTCTATCGAAAGGCACTTGGAAGCCAACGCGTCGTTGAATTCTTCTAGCGACGAAGAGGATGAAACAAATGAGGAGGATGTCCAAAATGTGGTGGGCAAAGTATTGTTGGCGTACCAGGGACAGAGCACGGATGCGGAGAAAGTGATATCGTACCTGGTTAATTCCTTTCAGACCAGCAGCGCTGTTTGTTTGATATGTATATCTACTGTCAAGAAGATAGATCCAATATGGAACTGCGACAAATGCTATGCATTTCTACACATGTCTTGCATTCTGCACTGGATCAACGACAGTTTGAGCTTCAAACGAGCCAAAGGGATTCCCCCAATCTGGgcatgTCCAAAATGCCGTATGGAATACGATCAGGATCAGATTCCAAGATCGTACAAGTGCTTCTGTAAGAAGACTGTGGATCCTCCGCATCAACCCTGGGCTATACCACATTCGTGCGGTGAAGCCTGCGGCAAACTTCTGCAACCAGAGTGCGGTCATAAATGCGTGTTGCTCTGCCATCCTGGTCCATGTCCGCCCTGCGCCAAGATGGTGTCGGTTAAATGTTACTGCGGCAAGCTACCGGCGCAACCGCGACGTTGCAATGCTAAAAACTGGAGCTGCGGGACTGTGTgcaacaaaaaatatgaatcTTGTGTACACAGTTGTAATAGCCTGTGTCACACTGGAGAATGTTCCCCCTGCGTAGAAATAGTATTACTGAAATGCCGTTGTAAGAGTAACGAGAAGATAGGGAAGTGCTACGAGGGCACGTGGATCTGCGAAAAACCTTGTAACAGGAGATTTTCTTGCAACGTACATAGCTGCGAGAGCACTTGTCATCTACCCGGCGATTGCGGCAACTGTCCCCTGGAAAAGAACAGATCCTGTCCCTGCGGAAAGAAACGATACGAAGTTTCTTGCAGGCGGCAGCAAGTGCCAACGTGCGGCGACACGTGCGGCAAATTGCTGGATTGCGGGTCGCACTTCTGCAACATGAGATGCCATACCGATCGCTGTGGTCAGTGCTTGGAAGTCTTAACGAAAGCGTGCAGATGCGGCAACTACACGAAAGAGATCGCCTGCGCAAAGGAGTTCCACTGCAACAAGAAATGCATGCAAATGCGTTTATGCGGTAGACATTTGTGCAACAAGAAATGCTGTGACTGCATATCGAAGAACACGTCTAATGCGTGTGAGAAAACGTGCGAGAACACGCTCAACTGCCGTAAGCACAAATGCGCCGCGCCTTGCCACAGCGGCCCTTGCTATCCGTGCACCAGAACGGACGTCATACAATGTCGATGCGGCAGCAGCAAGATAACAGTGCCGTGCGGTACAAAAAAGAGAATCAAGCCCCCGCCGTGTAACAAATCCTGCAAGATTCCACCTATCTGCCATCACAGCAAGAGGGAAACGCACAAGTGTCATCAGGGCCCATGCCCGCCGTGTAAAAAGGTCTGCGGATTGACGCACAAGAGATGCGGTCACTCTTGCCCGGTCACTTGTCACACCAAGGTCTGGGTGAAGAGCAGAGCGAACGGAGTAAAGGCGCAGCCTGTCGGGCCCTGGGATAAACCGAAGGACATTGTGGAGCTGAAGACTTTGCCGTGTCCACCGTGCGAGGTTTCCGTGCCTGTGACCTGTCTCGGTGGTCACGAGACGCGCCCTTGGCCGTGTCACATGTCGAAACCGAACTCCTGCGGCAGACTTTGCGGCCAATTACTGCCATGCCAGAATCACACCTGCGAGCTGATCTGTCACAAGCTACAAACTTCCGACGACGAATCCAACAGCGGTACTCCGTGCGTGGAGTGCGAGAAGGAGTGCGATTTCGCACGACCGCCAGGTTGTACGCACACGTGCCCGCAACCTTATTGCCACCCAGCGCCATGTAAACCATGCAAGCAATTGGTGCGAGTCTCTTGTCATTGCGGTATTAGCACCTTATATCGGCATTGTGTAAACCTGACATCTGCAACGAGTAAGGAACGGGACGAGTTACTCAAATGTGGAAACCAATGtccaaaaaatTACCCATGCGGCCACCGTTGCGTCAACGATTGTCATCCAGGAGAATGTAAAGGTGGAGAGGGATGCGGCAAGAAAGTTAGATTATGGTGTAAATGTAAACGGATCAAGAAGGACTTTCTTTGTTCGTTTCTTCAAAAGGAGCAGATCACCGTAGAGTGCGATAGCGCGTGCGAATTATTGAAGAATGAAAGAAAGGAAGCCCAGAAAGCTATGATAGCGAAGAAACTGGAAGAGGAGGAGCTGCGCAATCGGGAAGAGATTGAGAAGTTCGAGAAGAAGTTCAAGCCACGACGAAAAAGGAAGGACAAATACGAGAGCTTGAAACAGTCGCAAGAAAATGCAAGGAATAAGTATCGCAACTTATGGATTTTAGCAATTGTCGTAAGCATTATGGGGATAATAATAGTGTATTTGACTGCTCCTGACTTAAATATATCTGTATTGAGTTGA
Protein Sequence
MQKFKRAQAQNKLSIERHLEANASLNSSSDEEDETNEEDVQNVVGKVLLAYQGQSTDAEKVISYLVNSFQTSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLSFKRAKGIPPIWACPKCRMEYDQDQIPRSYKCFCKKTVDPPHQPWAIPHSCGEACGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTVCNKKYESCVHSCNSLCHTGECSPCVEIVLLKCRCKSNEKIGKCYEGTWICEKPCNRRFSCNVHSCESTCHLPGDCGNCPLEKNRSCPCGKKRYEVSCRRQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVLTKACRCGNYTKEIACAKEFHCNKKCMQMRLCGRHLCNKKCCDCISKNTSNACEKTCENTLNCRKHKCAAPCHSGPCYPCTRTDVIQCRCGSSKITVPCGTKKRIKPPPCNKSCKIPPICHHSKRETHKCHQGPCPPCKKVCGLTHKRCGHSCPVTCHTKVWVKSRANGVKAQPVGPWDKPKDIVELKTLPCPPCEVSVPVTCLGGHETRPWPCHMSKPNSCGRLCGQLLPCQNHTCELICHKLQTSDDESNSGTPCVECEKECDFARPPGCTHTCPQPYCHPAPCKPCKQLVRVSCHCGISTLYRHCVNLTSATSKERDELLKCGNQCPKNYPCGHRCVNDCHPGECKGGEGCGKKVRLWCKCKRIKKDFLCSFLQKEQITVECDSACELLKNERKEAQKAMIAKKLEEEELRNREEIEKFEKKFKPRRKRKDKYESLKQSQENARNKYRNLWILAIVVSIMGIIIVYLTAPDLNISVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
iTF_01423331;
80% Identity
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