Dqua003079.1
Basic Information
- Insect
- Dinoponera quadriceps
- Gene Symbol
- nfxl1
- Assembly
- GCA_001313825.1
- Location
- NW:359774-365294[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.1 5.4e+03 -3.2 1.1 15 19 126 130 125 130 0.81 2 17 0.14 7.4e+02 -0.5 0.8 4 10 161 167 160 167 0.95 3 17 5.5e-08 0.00028 20.0 15.1 1 18 175 191 175 192 0.98 4 17 9.4e-06 0.048 12.9 15.0 1 18 229 245 229 246 0.94 5 17 1.3 6.9e+03 -3.6 3.9 10 13 264 267 261 276 0.65 6 17 2.1e-06 0.011 15.0 12.0 1 19 281 300 280 300 0.94 7 17 2.9e-05 0.15 11.3 10.7 1 18 336 353 336 354 0.97 8 17 0.0048 25 4.3 7.3 1 12 388 399 388 399 0.94 9 17 0.43 2.2e+03 -2.0 0.2 6 10 409 413 408 416 0.88 10 17 1.1e-07 0.00057 19.1 13.1 1 18 419 436 413 437 0.85 11 17 0.00034 1.7 7.9 10.5 9 18 485 494 483 495 0.92 12 17 0.056 2.9e+02 0.9 11.1 1 12 505 515 505 515 0.95 13 17 0.85 4.4e+03 -2.9 5.8 14 18 544 548 544 549 0.89 14 17 9.8e-06 0.05 12.9 8.3 1 11 585 595 585 609 0.88 15 17 0.00063 3.2 7.1 16.5 4 19 622 637 620 637 0.91 16 17 2 1e+04 -6.5 3.4 9 13 643 647 643 647 0.71 17 17 0.0015 7.9 5.8 13.8 1 16 680 694 680 699 0.91
Sequence Information
- Coding Sequence
- ATGCATAAATTCAAGAAGGCTCAAGCGCAAAACAAACTGTCTATTGAGAAACACTTGGAAGCAAACGCATCATTAAATTCCTCTAGTGAAGAGGAGGATGAAACCAATGAGGAAGATGTCCAAAATGCAGTGGACAAAATATTGTCTGCCTATCAAGGACAAGGGATAGATGCGGAGAAAGTGATATCGTATCTGGTTAATTCCTTTCAATCCAGCAGTGCAGTTTGCTTAATATGTATATCAACTGTCAAGAAAATAGATCCGATATGGAACTGCAGAAAATGTTACGCGTTTCTCCATTTGTCCTGCATCTTGCACTGGATAAACGACAGTTTGAGTTATAAGCGGGCCAAAGGGATCACCCCGATCTGGGCATGCCCTAAGTGTCGCATGGAGTACGGACAGGATCAGATCCCAAGATCGTACGAATGTTTCTGCAGGAAGATTAAGGATCCTGTGTACCAACCATGGCTGATCCCGCACTCGTGCGGCGAGACCTGCGGCAAACTCCTACAGCCGGAATGCGGCCATAAGTGTGTATTGCTCTGCCACCCTGGGCCGTGTCCGCCGTGCGCCAAGATGGTGCTGGTGAAGTGTTACTGCGGCAAGCTGCCGGCGCAGCCGCGCCGCTGCAACGCGAAGAACTGGTGCTGCGGAAACACGTGCGACAAGAAGTACGAGTCGTGCTCGCACAGTTGCGGCAGCTCGTGCCACACCGGGGAGTGTCCACCGTGCGTGGAAACGGTGTCGTTGAGATGCCGTTGCGGGAGCAGCCAGAAGGAGGGCAGATGCCACGAGGGTATGTGGATCTGTGAGAAGCCGTGCGGTAGGAAGTTCACCTGCAACGTGCACACCTGCGAGAGTACTTGTCATCTGCCGGGCGATTGCGGCAACTGTCCCATGGAGAAAAACAGGTGCTGCCCGTGCGGGAAGAAACGATACGACGTCTCCTGCAAGCAGCAGCAAGTGCCGACGTGCGGGGACACCTGCGGCAAGTTGCTGGACTGCGGCTCGCACCGCTGCAACATGAGATGCCACACAGACCGGTGCGGCCAGTGCCTGGAGGTGGTGACGAAGGCGTGTCGGTGCGGCAGCTACACAAAGGAGATCGCCTGCGTGAAGGAGTTCCACTGCAACAAGAAGTGCGGCCAGATGCGGCTGTGCGGCCGACACCTGTGCAACAGGAAGTGCTGCGACTGCGTCTCGAAGAACGCGTCGAATCCCTGCGAGAAGACGTGCGGCGAGCCGCTGAACTGCCGCAAGCACAGGTGCGCCGCGCCTTGCCACAGCGGGCCCTGCTACCCGTGCAACAGAACGGACGCGGTGCAGTGCAGATGCGGCGGCAGCAAGATCACCGTGCCGTGCGGCACCAGGAAGAGGATCCGGCCGCCAGCGTGCAACAGGTCTTGCAGGATACCGCCGATCTGCCACCACAGCAAGCGAGAGACGCACAAGTGTCACCAGGGCCCGTGTCCGCCGTGCGGGAAGGTCTGCGGCCTGGCGCACAAGAGATGCGGCCACCATTGCCCGGCCACCTGCCACACCAAAGTCTGGGTGAAGACGAACGGAGTGAAAGCCAGCGGGCCCTGGGAGAGGCAGCGGGAGGACGTTATGCGGCTGAAGACCTTGCCGTGCCCGCCCTGCGAGGTCTCCGTGCCTGTGACCTGCCTGGGCGAGCACGAGACTCGCCCTTGGCCCTGCCACGCGTCGAGGCCGACTTCCTGCGGCAGGGTCTGTGGCCGAGCACTGCCGTGCGGGAACCACACCTGCGAATTGACGTGCCATCAAGTGGGGGCCATCGCCGCAGTTCCGTGCATGGAGTGCGAGAACGAGTGCCTCTTCCCGCGGCCGGAAGgctgcgcgcacgcgtgccCGCAACCTTGCCACCCGGCGCCGTGCGAACCGTGCAAGCAACTGGTGCGGCTCCCCTGCCACTGCGGTATCAGCACCCTTTATAGGCATTGCGTCGACCTGACGTCcggcgagaaacgcgacgagTTACTGCGATGCGGCAACCAGTGCCCGAAAAACTATCCGTGCGGGCATCGTTGCGTCAACGACTGCCATCCGGGAGCGTGCAGGGGTGGGGAGGAGTGCGGTAAGAAAGTCCGATTGTGGTGCAGATGCAAGCGGATCAAGAAAGACTTCCTCTGCTCGCTTATTCAGAAGAAGCGGATCGCCGTTGAGTGCGATGGTGTGTGCGAGTCGTTGAAGAACGAGAAGAACCAAGCGCAGGAGGCGATGAtcgcgaagaaacgagagGCGGAGGAACTGCGCAATCGGGAGGAGatcgagaaattcgagaagaAGTTTAAGCCGCGACGGAAGAGGAAGGACAAATACGACAACTCGAAGCAGTCCCAGGAAAGCACGGTGTACAAGCGTAAAATCGCGTGGATTCTAACCATTATCATTGGCCTCGCAGCGATAGCCTACACGACCGTACCTAATTTAAGTATACTTGAGAGCTGA
- Protein Sequence
- MHKFKKAQAQNKLSIEKHLEANASLNSSSEEEDETNEEDVQNAVDKILSAYQGQGIDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCRKCYAFLHLSCILHWINDSLSYKRAKGITPIWACPKCRMEYGQDQIPRSYECFCRKIKDPVYQPWLIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKMVLVKCYCGKLPAQPRRCNAKNWCCGNTCDKKYESCSHSCGSSCHTGECPPCVETVSLRCRCGSSQKEGRCHEGMWICEKPCGRKFTCNVHTCESTCHLPGDCGNCPMEKNRCCPCGKKRYDVSCKQQQVPTCGDTCGKLLDCGSHRCNMRCHTDRCGQCLEVVTKACRCGSYTKEIACVKEFHCNKKCGQMRLCGRHLCNRKCCDCVSKNASNPCEKTCGEPLNCRKHRCAAPCHSGPCYPCNRTDAVQCRCGGSKITVPCGTRKRIRPPACNRSCRIPPICHHSKRETHKCHQGPCPPCGKVCGLAHKRCGHHCPATCHTKVWVKTNGVKASGPWERQREDVMRLKTLPCPPCEVSVPVTCLGEHETRPWPCHASRPTSCGRVCGRALPCGNHTCELTCHQVGAIAAVPCMECENECLFPRPEGCAHACPQPCHPAPCEPCKQLVRLPCHCGISTLYRHCVDLTSGEKRDELLRCGNQCPKNYPCGHRCVNDCHPGACRGGEECGKKVRLWCRCKRIKKDFLCSLIQKKRIAVECDGVCESLKNEKNQAQEAMIAKKREAEELRNREEIEKFEKKFKPRRKRKDKYDNSKQSQESTVYKRKIAWILTIIIGLAAIAYTTVPNLSILES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- -
- 80% Identity
- -