Mpha008540.1
Basic Information
- Insect
- Monomorium pharaonis
- Gene Symbol
- nfxl1
- Assembly
- GCA_013373865.1
- Location
- CM023796.1:19886458-19889466[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 3.1e+04 -5.0 1.9 15 19 126 130 126 130 0.85 2 17 0.15 2.3e+03 -0.5 0.8 4 10 161 167 160 167 0.95 3 17 2.4e-07 0.0037 18.0 13.8 1 18 175 191 175 192 0.98 4 17 1.8e-08 0.00028 21.6 12.3 1 18 229 245 229 246 0.94 5 17 0.21 3.2e+03 -1.0 0.2 10 13 264 267 263 268 0.88 6 17 4.1e-05 0.64 10.9 13.7 1 19 281 300 281 300 0.93 7 17 0.11 1.7e+03 -0.0 12.8 3 18 338 353 326 354 0.86 8 17 0.0049 77 4.2 7.3 1 12 388 399 388 399 0.94 9 17 1.2 1.8e+04 -3.4 1.4 6 10 409 413 408 413 0.88 10 17 9e-08 0.0014 19.4 12.9 1 19 419 437 419 437 0.91 11 17 0.00059 9.3 7.2 11.7 9 19 485 495 483 495 0.90 12 17 0.0018 29 5.6 7.4 1 12 505 515 505 515 0.95 13 17 0.51 8e+03 -2.2 3.5 15 18 549 552 548 553 0.84 14 17 0.00031 4.9 8.1 6.0 1 12 589 600 579 600 0.81 15 17 2 3.1e+04 -5.6 3.4 14 18 612 616 612 620 0.59 16 17 0.00015 2.4 9.0 18.2 3 19 629 645 628 645 0.92 17 17 0.00014 2.2 9.1 13.5 1 16 690 704 690 710 0.87
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAAAAGGGCTCAAGCACAGAATAAACTGTCTATTGAAAGACATTTGGAGGCcaatgcattattaaattcgTCCAGTGAAGAGGAGGACGAGACAAATGAGGAGGACGTCCAAAATGTGGTGGGCAAAGTATTGTCGGCATACCAGGGACAGAGTACAGATTCGGAGAAAGTGATATCATATCTGGTTAATTCCTTTCAAAGCAGCAGTGCTGTTTGTTTGATATGTATATCGACTATCAAGAAAATAGATCCAATATGGAACTGCGACAAGTGCTATGCATTTCTACACATGTCCTGCATTCTGCACTGGATCAATGACAGTTTGAGCTACAAACGGGTCAAAGGAATTACACCAATCTGGGGATGTCCAAAATGTCGTATGGAGTACGATCAGGATCAGATTCCAAAATCATACaaatgtttttgcaaaaagACCATAGACCCTCTGCATCAGCCCTGGGTGATTCCACATTCCTGCGGCGAGACCTGCGGTAAGCCTCTCCAACCAGAGTGTGGTCACAAATGCGTGCTGCTCTGCCATCCCGGTCCGTGTTCGCCTTGCGCCAAGATGGTATCAGTCAAGTGTTACTGCGGCAAGCTACCGGCGCAACCGCGACGTTGCAACGCCAAAAACTGGAGCTGCGGAACCGCGTGCAACAAAAATCATGAGTCTTGCTCACACACATGTAACAGCCTGTGTCACGCTGGAGAATGTCCTCCCTGTGCGGAAACGGTACTACTTAAATGTCGTTGCAAGAGCAACGAGAAGGTGGGCAGGTGTCACGAAGGCACGTGGATCTGCGAGAAGTCCTGCAACAGGAGATTCTCTTGCAACGTGCACAGTTGTGAGAGCACTTGCCATCAACCCGGTGACTGTGGCAACTGTCCCCTGGAAAAGAACAGATGTTGTCCCTGCGGGAAAAAACGGTATGAGATCTCCTGCAGGCGGCAACAAGTGCCGACGTGCGGCGACACGTGCGGCAAGCTGTTGGACTGCCGGTCGCACTATTGCAGCATGAGATGCCACACCGATCGTTGCGGCCAGTGTCTGGAGGTCGTGATGAAGGCGTGCAGATGCGGCAGCTACATGAAGGAGATCGCTTGCGCGAAGGAGTTTCACTGCAACAAGAAGTGCATGCAGACGCGCCTGTGCGGCAGACACTTGTGCAACAGGAAGTGCTGTGACTGCATATTGAAGAACACGTCCAATCCCTGCGAAAAAACGTGCGAGAACACACTTAACTGCCGCAAGCACAAATGCGCCGCGCCTTGCCACAGTGGTCCCTGCTATCCGTGTACTCGAATGGATGTTATACAATGCAGATGCGGCGGCAGCAAGATAACGGTACCGTGCGGCACCAGGAAGAGAATCAAGCCGCCGCCATGCAATAAGTCCTGCAAGATTCCGCCTATCTGTCACCACAGTAAAAGGGAAACACACAAGTGTCATCATGGCCCATGCCCGCCGTGCAAGAAGGTCTGCGGGCTGACACACAAGAGATGCGGCCACTCCTGTCCGGCTACGTGCCACACCAAGGTCTGGGTGAAGATCAGAGCGAATGGAGTGAAGGCGCAGCCACCCGTTGGACCCTGGGAGAAACCGAAGGACGTTATGGAACTGAAGACTCTATCGTGTCCACCGTGCGAGATCTCCGTGCCCGTGACCTGTCTTGGCGGTCATGAGACGCGCCCCTGGCCTTGTCACGTGTCGAAACCGAGCTCCTGCGGTAGACCTTGCGGCCAACGGTTGCCGTGCGAAAATCACACCTGCGAGTTGACCTGTCACAAGCTGCAAACTTTCGACGAGTCCAGTGACGGTACTCCGTGCATGGAATGTGAGAAGGAATGCAGTTTCGCGCGACCGCCAGGCTGTACTCACACATGTCCCCAACCTTGTCATCCAGCACCATGTAAGCCTTGCAAGCAACTGGTGCGAGTCTCCTGCCATTGTGGTATCAGTACCCTTTACCGGCACTGCATAAACTTGACGTCTGCGACAAGCAAGGAACGGGACGAGTTACTTAAATGCGGAAACCAATGccccaaaaattatcTGTGCGGCCACCGTTGCATCAATGATTGTCATCCAGGAGAATGTAAGGGCGGCGAGGAATGCAACAAGAAAATCAGATTATGGTGTAAATGTAAACGAATCAAGAAGGACTTTCTTTGTTCGCTTCTTCAAAAGGAACAGATTACCGTAGAATGCGACAATATATGCGAGTCgttgaaaaatgagaaaagggAGGCCCAGAAAGCTCTGATAGCGAAAAAATTGGAAGAGGAAGAGCTGCGTAATCGGGAAGAAATTGAGAAATTCGAGAAGAAGTTTAAACCGCGACGAAAGAGAAAGGATCGATACGAAAACTCAAAGCAGTCCCAAAAGAATGCAAGgaataaatattgcaacgtGTGGATTTTAGCGATTATCGCAAGTATTATAGGAAtagtaataatgtatataaccGCCTCTGACTTAAGTGTACTTGGATTGAGTTGA
- Protein Sequence
- MQKFKRAQAQNKLSIERHLEANALLNSSSEEEDETNEEDVQNVVGKVLSAYQGQSTDSEKVISYLVNSFQSSSAVCLICISTIKKIDPIWNCDKCYAFLHMSCILHWINDSLSYKRVKGITPIWGCPKCRMEYDQDQIPKSYKCFCKKTIDPLHQPWVIPHSCGETCGKPLQPECGHKCVLLCHPGPCSPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTACNKNHESCSHTCNSLCHAGECPPCAETVLLKCRCKSNEKVGRCHEGTWICEKSCNRRFSCNVHSCESTCHQPGDCGNCPLEKNRCCPCGKKRYEISCRRQQVPTCGDTCGKLLDCRSHYCSMRCHTDRCGQCLEVVMKACRCGSYMKEIACAKEFHCNKKCMQTRLCGRHLCNRKCCDCILKNTSNPCEKTCENTLNCRKHKCAAPCHSGPCYPCTRMDVIQCRCGGSKITVPCGTRKRIKPPPCNKSCKIPPICHHSKRETHKCHHGPCPPCKKVCGLTHKRCGHSCPATCHTKVWVKIRANGVKAQPPVGPWEKPKDVMELKTLSCPPCEISVPVTCLGGHETRPWPCHVSKPSSCGRPCGQRLPCENHTCELTCHKLQTFDESSDGTPCMECEKECSFARPPGCTHTCPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCINLTSATSKERDELLKCGNQCPKNYLCGHRCINDCHPGECKGGEECNKKIRLWCKCKRIKKDFLCSLLQKEQITVECDNICESLKNEKREAQKALIAKKLEEEELRNREEIEKFEKKFKPRRKRKDRYENSKQSQKNARNKYCNVWILAIIASIIGIVIMYITASDLSVLGLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- -
- 80% Identity
- -