Basic Information

Insect: Polyergus mexicanus
Gene Symbol: nfxl1
Assembly: GCA_030449975.1
Location: JAUDSZ010000015.1:2882382-2885417[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.1 2.5e+04 -3.2 1.1 15 19 126 130 125 130 0.81

2 17 0.15 3.4e+03 -0.5 0.8 4 10 161 167 160 167 0.95

3 17 5.6e-08 0.0013 20.0 15.1 1 18 175 191 175 192 0.98

4 17 9.4e-08 0.0022 19.3 8.9 4 18 231 245 229 246 0.94

5 17 0.5 1.2e+04 -2.2 0.5 6 10 271 275 270 275 0.95

6 17 0.00048 11 7.5 11.5 1 19 281 300 281 300 0.92

7 17 0.0013 31 6.0 10.5 1 18 336 353 336 354 0.97

8 17 0.012 2.7e+02 3.0 8.0 1 12 388 399 388 399 0.94

9 17 1.2 2.7e+04 -3.4 1.4 6 10 409 413 408 413 0.88

10 17 9e-08 0.0021 19.4 12.9 1 19 419 437 419 437 0.91

11 17 0.00014 3.2 9.2 9.4 10 19 485 494 482 494 0.90

12 17 0.0018 43 5.6 7.4 1 12 504 514 504 514 0.95

13 17 0.86 2e+04 -2.9 5.8 14 18 547 551 547 552 0.89

14 17 0.14 3.3e+03 -0.5 8.1 1 12 588 599 578 599 0.80

15 17 2 4.6e+04 -5.6 3.4 14 18 612 616 612 620 0.59

16 17 0.00086 20 6.7 17.4 3 19 629 645 628 645 0.92

17 17 0.00021 4.8 8.6 11.4 1 16 690 704 690 710 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.1	2.5e+04	-3.2	1.1	15	19	126	130	125	130	0.81
2	17	0.15	3.4e+03	-0.5	0.8	4	10	161	167	160	167	0.95
3	17	5.6e-08	0.0013	20.0	15.1	1	18	175	191	175	192	0.98
4	17	9.4e-08	0.0022	19.3	8.9	4	18	231	245	229	246	0.94
5	17	0.5	1.2e+04	-2.2	0.5	6	10	271	275	270	275	0.95
6	17	0.00048	11	7.5	11.5	1	19	281	300	281	300	0.92
7	17	0.0013	31	6.0	10.5	1	18	336	353	336	354	0.97
8	17	0.012	2.7e+02	3.0	8.0	1	12	388	399	388	399	0.94
9	17	1.2	2.7e+04	-3.4	1.4	6	10	409	413	408	413	0.88
10	17	9e-08	0.0021	19.4	12.9	1	19	419	437	419	437	0.91
11	17	0.00014	3.2	9.2	9.4	10	19	485	494	482	494	0.90
12	17	0.0018	43	5.6	7.4	1	12	504	514	504	514	0.95
13	17	0.86	2e+04	-2.9	5.8	14	18	547	551	547	552	0.89
14	17	0.14	3.3e+03	-0.5	8.1	1	12	588	599	578	599	0.80
15	17	2	4.6e+04	-5.6	3.4	14	18	612	616	612	620	0.59
16	17	0.00086	20	6.7	17.4	3	19	629	645	628	645	0.92
17	17	0.00021	4.8	8.6	11.4	1	16	690	704	690	710	0.87

Sequence Information

Coding Sequence: ATGCAGAAGTTTAAGAGAGCTCAAGCACAAAATAAATTGTCCATTGAAAGACACTTGGAGGCCAACATATCATTAAATTCGTCTAGTGAAGAGGAAGATGAAACAAATGAGGAAGATGTCCAAAATGTGGTGGACAAAGTATTGTTGGCATATCAAGGACAAGGCATGGATGCAGAAAAAGTGATATCATACTTAGTTAATTCTTTTCGATCAAGTAGCGCTGTTTGCTTGATATGTATATCAACTGTCAAGAAAATAGATCCGATATGGAATTGCAACAAATGCTATGCATTTCTGCACATGTCCTGCATCTTGCATTGGATTAATGATAGTTTAAGTTACAAACGGACTAAAGGAATCACACCAATCTGGGCATGCCCAAAATGTCGCATGGAATATAACCAGGACCAGATTCCAAGATTGTATGAATGTTTctgtaaaaagataataaatccTCCATATCAACCCTGGATTATCCCACATTCTTGTGGCGAAACTTGTAACAAACTCTTACAACCAGAGTGTGGTCACAAATGTGTATTGCTCTGTCATCCTGGTCCATGCCCACCATGCGCAAAGATGGTGTCTGTCAAATGTTATTGCGGTAAGCTACCGCCACAGCCACGTCGTTGCAATGCTAAAAATTGGAGTTGTGGAGCAATATGcaacaaaaaatatgaattttgcTTGCAtacttgtaataatttatgtcaTGCTGGAGAATGTCTCCCTTGTATGGAAACAGTATTACTGAAATGCCATTGTAAGAGTAACCAAAAGGAAGGAAAATGCTACGAAGGTACATGGATGTGTGAGAGACTTTGTAACAGAAGATTCTCCTGCAATGTACATACCTGCGAGAGTACTTGTCATTTACCCAATGATTGCGGTAATTGTCCGTTCGAGAAGAACAGATATTGTCCTTGCGGGAAGAAACGATACGAAGTTTCTTGCAGGCAGCAGCAAGTACCGACGTGTGGCGATACTTGCGATAAATTGTTAGACTGCGGATCACACTTTTGCAATATGAGATGCCATACCGATCGTTGTGGTCACTGCTTAGAAGTGGTAACAAAAGCCTGCAAATGTGGTAGTTATACTAAAGAGATTGCTTGTGGAAAAGAATTTCACTGCAACAAGAAATGCACACAAATGCGCTTATGTGGTAAACATctgtgtaataaaaaatgttgcgATTGCATATTGAAGAATATATCTAATCCCTGCGAGAAAACATGCGAAAATATGCTTAATTGTCGGAAGCACAAGTGCGCTGCACCCTGTCATAGCGGTCCTTGCTATCCATGTACAAGAATGGATGTCATACAATGTCGATGCGGTAGCAGCAAAATAACAGTGCCATGCGGTACTAGAAAGAGAAGGCCACCGCCGTGTAACAAATCCTGCAAAATTCCGCCTGTCTGTCATCACAGTAAGAGAGAAACTCACAGATGTCATCAAGGCCCATGTCCACCCTGCAAAAAGATCTGCAACTTGATGCACAAGAGATGCGGTCACTCTTGCCCAGCCACTTGTCATACGAAAGTCTGGGTGAAGGTAAAAGCGAACGGAGTAAAAGCGCAACCTATTGGACCTTGGGAAAAGCCTGGGAAGGACATTATGGAGTTGAAAACTTTACCGTGCCCACCATGTGAAATTTCTGTGCTTGTGACCTGTCTCGGAGGTCATGAGACGCGTCCCTGGCCGTGTCATATATCGAAACCGAGCTCCTGCGGCAGAGCTTGCGGCCGACTATTGCCATGTAAAAATCACATCTGCAAGTTGACCTGTCATAAGATACTAATTTCTGATGACAAATCAGATAGCGGTATGCCATGCATGGAATGTGAGAAGGAATGTCAATTTGCACGTTTACCAGGTTGTACACACGCATGTCCGCAACCTTGTCATCCGGCGCCTTGCAAACCGTGCAAGCAATTAGTGCGAGTGTCTTGTCACTGTGGTATTAGCACTCTTTATCGACATTGTGTAGACTTGGTGTCCACGACGAATAAGAAACGCGACGAATTACTCAAATGTGGAAACCAGTGTCCAAAAAATTATTCGTGCGGCCACCGTTGTATCAACGATTGCCATCTAGGAGAATGCAAAGGAAAGGAACAATGCAACAAGAAAGTTAGATTATGGTGTAAATGTAAAAGGATCAAAAAGGATTTTCTttgtttatttcttcaaaaagaGCAGATTATTGTAGAATGTGATAATGTGTGCGAGTcattgaaaattgagaaaaaggAGGCCCAAGAAGCTATTATAGCAAAGAAACGAGAGGCGGAAGAATTGCGCAATCGGGAAGAGATTGAGAAATTCGAGAAAAAATTCAAGCCACGCCGAAAGAGGAAAGACAAGTATGAAGACTCAAAACTATCCCAAGGAAACATTGGGAATAAGTATTGGAATGCATGGATTTTAGCGATTTTTGTAAGCATTATAGGTATAGTAATAGTATATATGACTGTTTCTGATTCAAGTATACTTGAAatgatttga
Protein Sequence: MQKFKRAQAQNKLSIERHLEANISLNSSSEEEDETNEEDVQNVVDKVLLAYQGQGMDAEKVISYLVNSFRSSSAVCLICISTVKKIDPIWNCNKCYAFLHMSCILHWINDSLSYKRTKGITPIWACPKCRMEYNQDQIPRLYECFCKKIINPPYQPWIIPHSCGETCNKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPPQPRRCNAKNWSCGAICNKKYEFCLHTCNNLCHAGECLPCMETVLLKCHCKSNQKEGKCYEGTWMCERLCNRRFSCNVHTCESTCHLPNDCGNCPFEKNRYCPCGKKRYEVSCRQQQVPTCGDTCDKLLDCGSHFCNMRCHTDRCGHCLEVVTKACKCGSYTKEIACGKEFHCNKKCTQMRLCGKHLCNKKCCDCILKNISNPCEKTCENMLNCRKHKCAAPCHSGPCYPCTRMDVIQCRCGSSKITVPCGTRKRRPPPCNKSCKIPPVCHHSKRETHRCHQGPCPPCKKICNLMHKRCGHSCPATCHTKVWVKVKANGVKAQPIGPWEKPGKDIMELKTLPCPPCEISVLVTCLGGHETRPWPCHISKPSSCGRACGRLLPCKNHICKLTCHKILISDDKSDSGMPCMECEKECQFARLPGCTHACPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVDLVSTTNKKRDELLKCGNQCPKNYSCGHRCINDCHLGECKGKEQCNKKVRLWCKCKRIKKDFLCLFLQKEQIIVECDNVCESLKIEKKEAQEAIIAKKREAEELRNREEIEKFEKKFKPRRKRKDKYEDSKLSQGNIGNKYWNAWILAIFVSIIGIVIVYMTVSDSSILEMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476621;
90% Identity: iTF_00280358; iTF_00868455; iTF_00110213; iTF_00265355; iTF_00867858; iTF_00730420; iTF_00729749; iTF_01255223; iTF_00264698; iTF_00869307;
80% Identity: -