Tzet003189.1
Basic Information
- Insect
- Trachymyrmex zeteki
- Gene Symbol
- nfxl1
- Assembly
- GCA_001594055.1
- Location
- NW:89477-93593[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 5.8e+03 -3.2 1.1 15 19 126 130 125 130 0.81 2 18 0.42 2.2e+03 -1.9 0.6 4 10 161 167 161 167 0.93 3 18 5.6e-08 0.0003 20.0 15.1 1 18 175 191 175 192 0.98 4 18 1.4e-06 0.0074 15.6 13.0 4 18 231 245 229 246 0.95 5 18 1.5 8.2e+03 -3.7 1.7 6 10 271 275 271 275 0.93 6 18 1.5e-05 0.079 12.3 12.3 1 19 281 300 281 300 0.93 7 18 0.54 2.9e+03 -2.3 12.8 3 18 338 353 326 354 0.86 8 18 0.0025 14 5.1 6.2 1 12 388 399 388 399 0.94 9 18 0.86 4.6e+03 -2.9 1.0 6 10 409 413 408 413 0.91 10 18 9e-08 0.00048 19.4 12.9 1 19 419 437 419 437 0.91 11 18 1.6 8.6e+03 -3.8 0.6 9 12 465 468 465 468 0.77 12 18 0.0001 0.56 9.6 9.8 9 19 485 495 483 495 0.90 13 18 0.0018 9.9 5.6 7.4 1 12 505 515 505 515 0.95 14 18 1.9 1e+04 -4.1 3.6 14 18 547 551 547 552 0.88 15 18 0.0022 12 5.3 8.6 1 12 588 599 578 599 0.80 16 18 2 1.1e+04 -5.6 3.4 14 18 612 616 612 620 0.59 17 18 0.00015 0.82 9.0 18.2 3 19 629 645 628 645 0.92 18 18 0.00017 0.93 8.9 13.7 1 16 690 704 690 710 0.88
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAAGAGGGCTCAAGCACAGAATAAACTGTCTATTGAAAAGCACTTGGAAGCCAATGCGTTGTTGAATTCGTCTAGCGAAGACGAGGATGAAACTAACGAAGAAGATGTCCAAAATGTGGTGGGCAAAGTATTGTCAGCGTACCAAGGACAGAGCACAGATGCCGAAAAAGTGATATCGTACTTAGTGAATTCCTTTCAAACCAGCAGTGCTGTTTGTTTGATATGTATATCCTCTGTCAAGAAGATAGATCCaATATGGAACTGTGACAAGTGCTATGCATTTCTACACATGTCCTGCATCCTACATTGGATCAATGACAGTTTGAATTGCAAACGGGCTAAAGGAATCACACCAATCTGGGCCTGtCCAAAATGCCGTATGGAATATGATCAGGATCAGACTCCAAGATCGTACAAATGCTTTTGTAAAAAGTCAGTAGATCCTCAGTATCAACCATGGATTATTCCGCATTCTTGCGGCGAGGCCTGTGGCAAGCTTCTGCAACCAGAGTGCGGTCACAAATGCGTGTTGCTTTGCCATCCTGGTCCATGTCCACCCTGCGCTAAGATGGTATCTGTTAAATGTTACTGTGGCAAGCTACCGGCGCAACCGCGACGTTGCAATGCTAAAACCTGGAGCTGTGGAACTgcgtgcaataaaaaatatgaattttgtcCACACACTTGTGATAATGTGTGTCATACTGGAGAATGTTCCCCTTGTGTAGAAACAGTAGTACTGAAATGCCGTTGTAAGAGTAACGAGAAAGTAGGGAAGTGCTACGAGGGTACATGGATTTGCGAGAAACCTTGCAATAGAAAATTCTCTTGTAACGTACATAGCTGTGAAAGCACTTGTCATCTACCCGGCGACTGTGGCAACTGTCCCCTGGAAAAGAACAGATATTGTCCTTGTGGGAAAAAACGATATGAAATTTCTTGCAGGCGGCAGCAAGTGCCAACGTGCGGGGATACGTGCGGCAAGTTGTTGGACTGCGAATCGCACTTCTGCAACATGAGATGCCATACCGATCGCTGTGGTCAATGCTTGGAAGTTGTAACAAAAGCGTGTAGATGCGGTAGTTACACGAAAGAAATCGCCTGTGCGAAGGAATTCCACTGCAACAGAAAATGCATGCAAATGCGCTTATGCGGTAGACATTGGTGCAACAAAAAATGCTGCGACTGCATATCGAAGAACACGTTCAATCATTGTGAAAAAACATGCGAGAATACGCTCAACTGCCGTAAGCACAAATGCGCTGCACCTTGCCACAGTGGTCCTTGCTATCCATGTACCAGAAcggacactatacagtgtcgaTGTGGCAGCAGCAAGATAACGGTGCCATGTGGTACCAGGAAGAGAATCAAGCCACCACCGTGCCACAAATCCTGCAAGATCCCACCTATCTGTCATCACAGCAAGAGAGAAACACACAAATGTCATCAAGGTCCATGTCCACCATGCAAAAAGGTCTGCGGATTGACGCACAAGAGATGCGGTCATTCTTGCCCAGCCACTTGTCACACCAAAGTCTGGATGAAGATTAGAGCGAACGGAGTAAAGGCGCAGCCTATTGGACCTTGGGAAAAACCAAAGTATATTATAGAACTGAAGACTTTGCCATGTTCACCGTGCGAGGTTTCCGTACCTGTGACTTGTCTCGGTGGTCACGAGACGCGCCCTTGGCCGTGTCACATATCGAAACCGAGTTCCTGCGGTAGACTTTGCGGCCAGCTATTACCATGCAAGAATCACACTTGCGAGTTGACTTGTCACAAACTACAGACTTCCGACAACGAGTCTAACAGCGGTATTCCGTGCATGGAATGCGAGAAGGAGTGTAGTTTTGCACGACCGCCTGGTTGTACGCACACGTGTCCTCAACCTTGTCACCCAGCACCATGTAAACCATGTAAACAATTGGTGCGAATCTCTTGCCATTGCGGTATTAGCATTCTTTACCGGCATTGCGTGAACTTGACGTCTGCAACGAGCAAGGAACGGAATGAATTACTCAAATGCGGGAACCAATGcccaaaaaattatttatgcGGCCACCGTTGTATCAATGATTGTCATCCAGGAGAATGCAAAGGCGGGGAAAAATGTAGCAAGAAAGTTAGATTATGGTGTAAGTGTAAACGAATCAAAAAGGATTTTCTATGTTCACTTCTTCAAAAGGAGCAGATTACCGTAGCATGCGATAGTGTATGTGAATCACtgaaaaatgagagaaaagagGCTCAAGAAGCTATGCTAGCGAAGAAGCTGGAAGAGGAGGAGCTGCGCAATCGGGAggagattgaaaaattcgagAAAAAGTTCAAGCCACGACGAAAGAGGAAGGACAAGTATGAAAACTCGAAACAATCCAAAGAAAACGCGAGGAATAAGTATCACATTGCATGGATTTTAGCGATTATCGTAAGCATTATAGGgataataatagtttatatgACCGCTTCTGACTTAAGTATACCTGGATTGAGCTGA
- Protein Sequence
- MQKFKRAQAQNKLSIEKHLEANALLNSSSEDEDETNEEDVQNVVGKVLSAYQGQSTDAEKVISYLVNSFQTSSAVCLICISSVKKIDPIWNCDKCYAFLHMSCILHWINDSLNCKRAKGITPIWACPKCRMEYDQDQTPRSYKCFCKKSVDPQYQPWIIPHSCGEACGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKTWSCGTACNKKYEFCPHTCDNVCHTGECSPCVETVVLKCRCKSNEKVGKCYEGTWICEKPCNRKFSCNVHSCESTCHLPGDCGNCPLEKNRYCPCGKKRYEISCRRQQVPTCGDTCGKLLDCESHFCNMRCHTDRCGQCLEVVTKACRCGSYTKEIACAKEFHCNRKCMQMRLCGRHWCNKKCCDCISKNTFNHCEKTCENTLNCRKHKCAAPCHSGPCYPCTRTDTIQCRCGSSKITVPCGTRKRIKPPPCHKSCKIPPICHHSKRETHKCHQGPCPPCKKVCGLTHKRCGHSCPATCHTKVWMKIRANGVKAQPIGPWEKPKYIIELKTLPCSPCEVSVPVTCLGGHETRPWPCHISKPSSCGRLCGQLLPCKNHTCELTCHKLQTSDNESNSGIPCMECEKECSFARPPGCTHTCPQPCHPAPCKPCKQLVRISCHCGISILYRHCVNLTSATSKERNELLKCGNQCPKNYLCGHRCINDCHPGECKGGEKCSKKVRLWCKCKRIKKDFLCSLLQKEQITVACDSVCESLKNERKEAQEAMLAKKLEEEELRNREEIEKFEKKFKPRRKRKDKYENSKQSKENARNKYHIAWILAIIVSIIGIIIVYMTASDLSIPGLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- iTF_01476621;
- 80% Identity
- -