Obru010353.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Odontomachus brunneus
Gene Symbol
nfxl1
Assembly
GCA_010583005.1
Location
NW:2395930-2401187[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.1 6.1e+03 -3.3 1.1 15 19 126 130 125 130 0.81
2 16 0.15 8.3e+02 -0.5 0.8 4 10 161 167 160 167 0.95
3 16 5.6e-08 0.00032 20.0 15.1 1 18 175 191 175 192 0.98
4 16 2.1e-05 0.12 11.8 13.3 3 18 230 245 218 246 0.91
5 16 0.17 9.9e+02 -0.7 4.0 7 13 261 267 261 276 0.75
6 16 9.8e-05 0.56 9.7 11.4 1 19 281 300 281 300 0.92
7 16 4.2e-05 0.24 10.8 9.2 1 18 336 353 336 354 0.97
8 16 0.0069 40 3.7 7.6 1 12 388 399 388 399 0.94
9 16 0.65 3.7e+03 -2.6 0.1 6 10 409 413 409 415 0.92
10 16 1e-07 0.00057 19.2 13.3 1 18 419 436 413 437 0.85
11 16 0.00019 1.1 8.7 8.2 9 19 485 495 483 495 0.90
12 16 0.45 2.6e+03 -2.0 12.3 1 12 505 515 505 515 0.95
13 16 0.87 4.9e+03 -3.0 5.8 14 18 548 552 548 553 0.89
14 16 0.0014 8 6.0 8.1 1 12 589 600 579 601 0.81
15 16 0.00086 4.9 6.6 17.4 3 19 633 649 632 649 0.92
16 16 0.0017 9.6 5.7 11.9 1 16 694 708 694 714 0.89

Sequence Information

Coding Sequence
ATGCATAAATTCAAGAAGGCTCAAGCACAAAACAAATTGTCTATTGAGAAACACCTGGAAGCAAATGCATCCTTAAACTCATCTAGTGAAGAAGAAGATGAAACAAATGAGGATGATGTTCAAAATGTGGTGGACAAAGTATTGTCTGCATATAAAGGACAAGGGATAGATGCAGAAAAAGTGATATCATATTTAGTTAATTCTTTTCAATCCAGCAGTGCAGTTTGCTTGATATGTATATCAACTGTCAAGAAAATAGATCCGatATGGAACTGCAGAATATGCTATGCATTTCTCCATTTGTCTTGTATCTTACATTGGATAAATGACAGTTTGAATTACAAACGGGCTAAAGGAATTACCCAAATCTGGGCATGCCCTAAATGTCGTATGGAATATGGGCAGGATCAGATCCCAAGATCATACAAGTGTTTCTGCAGAAAGACCATAGACCCTCCGTATCAACCATGGATGATCCCGCATTCCTGTGGCGAAACCTGTGGTAAATTGCTGCAACCAGAATGTGGCCataaatgtgtattgctttgccATCCTGGTCCGTGTCCACCATGTGCCAAGATGGTCATGGTAAAATGTTACTGTGGCAAACTACCAGCACAGCCACGTCGCTGTAATGCCAAAAACTGGAGCTGTGGCAACGTTTGCAACACGAAATACGAATCATGCATGCACAGTTGTGGCAATTTGTGTCATACTGGTGAGTGTCTGCCATGCATGGAGACAGTGTCATTGAAATGCCGTTGCAAAAGCAGCCAGAAGGAAGAGAAATGCCACAAGGGTATATGGATCTGTGAGAAACCATGCAACAGAAAGTTTTCCTGCAACGTGCATGTTTGCGAGAGTACCTGCCACTTGCCAGGCGACTGCGGTGACTGTCCCATGGAGAAGAACAGATTCTGTCCCTGCGGAAAGAAACGATACGAGGTTTCCTGCAGGCAGCAGCAAGTGCCGGCATGCGGGGACACCTGCGGCAAGTTACTGAACTGCGGCTCGCACTACTGCAACATGAGATGCCACACGGATCGTTGTGGCCAATGCCTGGAGGTGGTGACGAAGACGTGCCGATGTGGCAGCTACACGAAGGAGATCGCCTGTGTGAAAGAGTTTCATTGCAACAAGAAGTGCACACAGACGCGCCTGTGCGGCCGGCATCTGTGCAACAAAAAATGTTGCGACTGCGTCTTGAAAAACGCATCCAATCTCTGCGAGAAGATTTGCGGTGAGACGCTAAATTGCCGCAAGCACAAATGCGCCGCGCCCTGTCACAGCGGTCCGTGCTATCCGTGCAACAGAACGGACGTCATACAATGTAGATGCGGCAGCAGCAGAATCACGGTGCCGTGCGGCACCAGGAAACGAATTCGACCGCCGCCGTGCAACAAGTCCTGCAAGATACCGCCGATCTGCCACCATAGCAAACGAGAGACGCACAAGTGCCATCAGGGCTCGTGTCCGCCGTGCAAAAAGGTCTGCGGTCTGATCTACAAGAGATGCGGCCACTGCTGTCCAGCTACCTGCCACACCAAGGTCTGGGTAAAGGTGAAAGTAAATGGAGCGAAGTCACAGCCCATCGGACCCTGGGAGAAACGACAGGAGGACGTTATGCAGCTGAAGACCCTGCCGTGCCCGCCGTGCGAAGTCTCCGTGCCTGTGACTTGCCTAGGCGGTCATGAGACGCGCCCTTGGCCGTGCCATATGTCGAGACCGAGCTCCTGCGGTAGAGTTTGCGGCCGACCACTGCCGTGTAAAAATCACACCTGCGAATTAACATGTCACAAGGTAGGGACAGTCAACGAGGTAGACGGTACGAGCAGCAATGGCACTCCGTGCATGGAGTGTGTGAACGAATGCCTCTTCTCACGTCCAACTGGTTGCACGCACGCGTGCCCGCAACCTTGTCATCCGGCACCGTGCAAGCCGTGCAAGCAACTGGTGCGGGTTTCTTGCCATTGCGGCATCAGCACTCTGTATAGACACTGCGTCGACTTGACGTCTGCAAGCAGCAAGAGACGAAACGAGTTACTGCGATGCGGCAACCAATGCCCGAAAAATTATTCATGTGGGCATCGTTGCGTCAACGATTGTCACTCGGGAACTTGTACGAAAGGGGAGGAATGCAATAAGAAAGTCAGATTGTGGTGCAAATGCAAGCGAATCAAGAAGGATTTCCTTTGTTCGCTTATTCAGAAGAAGCAAATTACCGTGGAATGTGACGATGTGTGCGAGTCGATGAAGAACGAAAGGAACCAAGCACAAGAGGCTATGATGGCGAGGAAGCGAGAGGCGGAGGAACTGCGCAATCGAGAGGAGATTGAGAAATTCGAGAAGAAGTTCAAGCCACGACGCAAAAAGAGAGATAAGTATGACAACTCAAAACAGTCCCAGGATAATACGGGATACAAGCGTAAAATCGCGTTGATCGTAGCTATCATTATAGTTCTCATAGGTGTAATAATAGCTTATACGAATGGACTCAATTTTAATATACTTGAGAGCTGA
Protein Sequence
MHKFKKAQAQNKLSIEKHLEANASLNSSSEEEDETNEDDVQNVVDKVLSAYKGQGIDAEKVISYLVNSFQSSSAVCLICISTVKKIDPIWNCRICYAFLHLSCILHWINDSLNYKRAKGITQIWACPKCRMEYGQDQIPRSYKCFCRKTIDPPYQPWMIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKMVMVKCYCGKLPAQPRRCNAKNWSCGNVCNTKYESCMHSCGNLCHTGECLPCMETVSLKCRCKSSQKEEKCHKGIWICEKPCNRKFSCNVHVCESTCHLPGDCGDCPMEKNRFCPCGKKRYEVSCRQQQVPACGDTCGKLLNCGSHYCNMRCHTDRCGQCLEVVTKTCRCGSYTKEIACVKEFHCNKKCTQTRLCGRHLCNKKCCDCVLKNASNLCEKICGETLNCRKHKCAAPCHSGPCYPCNRTDVIQCRCGSSRITVPCGTRKRIRPPPCNKSCKIPPICHHSKRETHKCHQGSCPPCKKVCGLIYKRCGHCCPATCHTKVWVKVKVNGAKSQPIGPWEKRQEDVMQLKTLPCPPCEVSVPVTCLGGHETRPWPCHMSRPSSCGRVCGRPLPCKNHTCELTCHKVGTVNEVDGTSSNGTPCMECVNECLFSRPTGCTHACPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVDLTSASSKRRNELLRCGNQCPKNYSCGHRCVNDCHSGTCTKGEECNKKVRLWCKCKRIKKDFLCSLIQKKQITVECDDVCESMKNERNQAQEAMMARKREAEELRNREEIEKFEKKFKPRRKKRDKYDNSKQSQDNTGYKRKIALIVAIIIVLIGVIIAYTNGLNFNILES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
-
80% Identity
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