Hsal011838.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- nfxl1
- Assembly
- GCA_003227715.1
- Location
- NW:40565-45174[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.1 6.4e+03 -3.3 1.1 15 19 126 130 125 130 0.81 2 16 0.15 8.7e+02 -0.5 0.8 4 10 161 167 160 167 0.95 3 16 5.6e-08 0.00034 20.0 15.1 1 18 175 191 175 192 0.98 4 16 1.9e-07 0.0011 18.4 11.8 3 18 230 245 229 246 0.92 5 16 1.4 8.2e+03 -3.6 2.2 6 10 271 275 271 275 0.92 6 16 4.5e-06 0.027 13.9 11.5 1 19 281 300 281 300 0.93 7 16 8.4e-05 0.5 9.9 7.9 1 18 336 353 336 354 0.97 8 16 0.0069 41 3.8 7.6 1 12 388 399 388 399 0.94 9 16 1.1e-07 0.00063 19.1 13.4 1 18 419 436 413 437 0.85 10 16 0.00011 0.63 9.6 9.8 9 19 485 495 483 495 0.90 11 16 0.011 66 3.1 8.5 1 12 505 515 505 515 0.95 12 16 0.86 5.2e+03 -2.9 5.8 14 18 546 550 546 551 0.89 13 16 0.0016 9.8 5.8 4.7 1 12 587 598 577 598 0.91 14 16 1.9 1.1e+04 -4.0 1.1 14 18 614 618 614 619 0.83 15 16 0.0077 46 3.6 17.2 3 19 631 647 630 647 0.91 16 16 0.00015 0.91 9.0 12.0 1 16 692 706 692 712 0.88
Sequence Information
- Coding Sequence
- atgCATAAATTCAAGAAAGCTCAAGCacaaaataaattatctattgAGAAACATTTGGAAGCTAATGCATCATTAAATTCATCAagtgaagaagaagatgaaacAAACGAGgaagatgttcaaaatgtGGTGGACAAAATATTGTCTGCATATCAAGGACAAGGGATAGATGCAGAAAAAGTGATATCATATTTGGTTAATTCTTTTCAATCTAGCAGTGCAGTTTGCTTAATATGTATATCAACTGTAAAAAAAATAGATCAGATATGGAACTGCAAAAAATGCTATGCGTTTCTCCATTTGTCTTGCATCCTACATTGGATAAATGACAGTTTGAGTTACAAACGGGCTAAAGGAATTACTCCAATTTGGGCATGCCCTAAATGTCGTATGGAATATGGACAGAATCAAATCCCAAGAACATATGAATGTTTCTGTGGAAAAACCATAGATCCTCCATATCAGCCATGGGTGATTCCACATTCCTGTGGCGAGACTTGTGGCAAACTCCTTCAACCAGAATGTGGCCACAAATGTGTATTGCTCTGTCATCCTGGTCCGTGTCCACCATGTGCCAAGATGGTGACAGTAAAATGTTACTGTGGTAAATTTCCGGCACAGCCACGTCGCTGCAACGCCAAAAACTGGTGTTGTGGGAATATATGTAACAAGAAATACGAATCGTGTACGCACAGTTGCAGCAATTTATGCCATGCTGGAGAGTGTCCACCATGTATGGAAACAGTGTTGCTGAAATGCCGTTGCAAAAATaaccagaaagaaggaaaatgttACGAAGATGTATGGATCTGTGAGCAACCATGCAACAGGAAATTTTCCTGCAATGTACATACTTGCGAGAGCACTTGCCACTTGCCGGGCGATTGCAGTAATTGCCCCATGGAGAAGAACAGATGCTGTCCATGTGGAAAGAAACGATATGAGGTTTCATGTAGGCAGCAGCAAGTACCGACGTGCGGAGACACTTGCGATAAGTTACTGGACTGTGGCTCGCACTACTGTAATATGAGATGCCACATGGATCGCTGCGGCCAATGCCTAGAAGTGGTAACAAAGACGTGCCGATGTGGCACTTATACGAAAGAGATCGCTTGCGTAAAGGAGTTTCATTGCAACAAAAAGTGCACACAGATGCGCTTATGTGGTCGACACCTGTGCAACAAAAAATGTTGCGACTGCATCTCGAAAAACGTGTCTAATCTCTGCGAAAAAACGTGCGGCGAGACTCTCAATTGCCGCAAGCACAAATGCGCCGCACCTTGCCATAGCGGCCCTTGTTACCCATGCAACAGAATGGATGTCATACAATGTAGATGCGGCAGCAGCAAGATCACAGTGCCGTGTGGCACCAGAAAGAGAATCCGACCGCCACCGTGCAACAAGTCTTGCAAGATACCACCAACCTGTCACCACAGTAAACGAGAGACGCATAAATGCCACCAAGGCCCATGTCCGCCATGCAAGAAAGTTTGCGGTCTAACGTACAAGAGATGCGGCCACAGCTGTCCAACCACTTGCCACACTAAAGTCTGGGTGAAGGTGAACGGAGTGAAGTCACAACCCATTGGTCCCTGGGAGAAACAACAAAAGGATGTTATGCAGCTGAAGACCCTACCGTGTCCACCGTGCGAAGTCTCCGTGCCTGTGACTTGTTTGGGCGGTCATGAGACGCGCCCTTGGCCATGTCATATGTCGAGACCGAGTTCCTGCGGCAGAGTCTGCGGCCAACCATTGCCATGCACAAATCATGTCTGTGAATTAACATGCCATAAAATAGGGACCATTAACGAGGCGAACGACACGAGTAGTAATGGTACTCCGTGTATGGAGTGCGAGAACGAGTGCCTCTTCCCGCGTCCGGAAGGTTGTACACACGTGTGTCCGCAACCTTGTCACCCGGTGCCGTGCAAACCGTGTAAGCAACTAGTGCGGATTTCTTGTCATTGCGGCATTAGTACTTTGTATAGACACTGTGTCGACTTGACGTCTGCAAGTGGCGAGAAACGCGACGAATTATTACGATGTGGCAACCAATGTCCGAAAAACTACCCATGTGGCCATCGTTGCATCAACGATTGTCATCCTGGAACGTGCAAGAATGGGGAAGAATGCAATAAGAAAATCAGACTGTGGTGTAAATGCAAGCGAATCAAGAAGGACTTTGTTTGTTCGTTTATTCAAAAGCGGCAGATTATTGTAGACTGTGACGATGTGTGCGAATCGTTGAGGAATGAGAGGAACCAAGCGCAAGAGGCTATGATGGCGAAAAAGCGAGAGGCGGAAGAACTGCGTAATCGTGAAGAGATCGAGAAATTCGAGAAGAAGTTCAAACCACGACGAAAGAGGAAGGATAAGTATGACAATTTGAAGCAGTCGCAAGAGAACGCAGGATACAAGCGTAAAATCGTGTGGATTTTAACAGTTGTCATAGGTTTCATAGGTATAACAATAGCTTACACGACTGCaccaaatgtaaatatatttgaaaGCTGA
- Protein Sequence
- MHKFKKAQAQNKLSIEKHLEANASLNSSSEEEDETNEEDVQNVVDKILSAYQGQGIDAEKVISYLVNSFQSSSAVCLICISTVKKIDQIWNCKKCYAFLHLSCILHWINDSLSYKRAKGITPIWACPKCRMEYGQNQIPRTYECFCGKTIDPPYQPWVIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKMVTVKCYCGKFPAQPRRCNAKNWCCGNICNKKYESCTHSCSNLCHAGECPPCMETVLLKCRCKNNQKEGKCYEDVWICEQPCNRKFSCNVHTCESTCHLPGDCSNCPMEKNRCCPCGKKRYEVSCRQQQVPTCGDTCDKLLDCGSHYCNMRCHMDRCGQCLEVVTKTCRCGTYTKEIACVKEFHCNKKCTQMRLCGRHLCNKKCCDCISKNVSNLCEKTCGETLNCRKHKCAAPCHSGPCYPCNRMDVIQCRCGSSKITVPCGTRKRIRPPPCNKSCKIPPTCHHSKRETHKCHQGPCPPCKKVCGLTYKRCGHSCPTTCHTKVWVKVNGVKSQPIGPWEKQQKDVMQLKTLPCPPCEVSVPVTCLGGHETRPWPCHMSRPSSCGRVCGQPLPCTNHVCELTCHKIGTINEANDTSSNGTPCMECENECLFPRPEGCTHVCPQPCHPVPCKPCKQLVRISCHCGISTLYRHCVDLTSASGEKRDELLRCGNQCPKNYPCGHRCINDCHPGTCKNGEECNKKIRLWCKCKRIKKDFVCSFIQKRQIIVDCDDVCESLRNERNQAQEAMMAKKREAEELRNREEIEKFEKKFKPRRKRKDKYDNLKQSQENAGYKRKIVWILTVVIGFIGITIAYTTAPNVNIFES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- -
- 80% Identity
- -