Arud013151.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphaenogaster rudis
Gene Symbol
nfxl1
Assembly
GCA_003063815.1
Location
NJRL01000689.1:32793-35793[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.1 1.3e+04 -3.3 1.1 15 19 126 130 125 130 0.81
2 18 0.15 1.8e+03 -0.5 0.8 4 10 161 167 160 167 0.95
3 18 5.6e-08 0.00068 20.0 15.1 1 18 175 191 175 192 0.98
4 18 4.2e-08 0.00051 20.4 12.1 4 18 231 245 229 246 0.94
5 18 1.5 1.9e+04 -3.7 1.7 6 10 271 275 271 275 0.93
6 18 1.5e-05 0.18 12.3 12.3 1 19 281 300 281 300 0.93
7 18 0.00014 1.7 9.2 8.3 1 18 336 353 336 354 0.97
8 18 0.0069 84 3.8 7.6 1 12 388 399 388 399 0.94
9 18 1 1.2e+04 -3.2 1.0 6 10 409 413 408 413 0.90
10 18 9e-08 0.0011 19.4 12.9 1 19 419 437 419 437 0.91
11 18 0.00011 1.3 9.6 9.8 9 19 485 495 483 495 0.90
12 18 0.0018 22 5.6 7.4 1 12 505 515 505 515 0.95
13 18 0.86 1e+04 -2.9 5.8 14 18 547 551 547 552 0.89
14 18 0.0024 29 5.2 8.8 1 12 588 599 578 599 0.80
15 18 0.33 4e+03 -1.6 1.5 5 10 615 620 615 620 0.95
16 18 0.00015 1.9 9.0 18.2 3 19 629 645 628 645 0.92
17 18 0.00013 1.6 9.3 16.1 1 16 690 704 690 709 0.95
18 18 1.4 1.7e+04 -3.6 0.6 6 10 742 746 741 746 0.86

Sequence Information

Coding Sequence
ATGCAGAAATTTAAAAGAGCTCAGGCACAGAATAAACTGTCCATTGAAAAGCACTTGGAAGCTAATGCGTTGTTGAATTCGTCTAGCGAAGAGGAGGATGAAACAAATGAGGAAGATGTCCAAGATGTAGTAGGCAAAGTATTGTCAGCGTACCAGGGACAGAACACAGATGCAGAGAAGGTGATATCGTATCTGGTTAATACCTTCCAAACCAGCAGCGCTGTTTGTTTGATATGTATATCAACTGTCAAGAAGATAGATGCGATATGGAACTGCGACAAATGCTATGCATTTCTACACATGTCTTGTATCCTACACTGGATCAACGACAGTTTGAGCTGCAAACGGGCTAAAGGAATCACACTGATCTGGGCATGCCCAAAATGCCGTATGGAGTACAACCAGGATCAGATTCCAAGATCATACAAATGCTTCTGTAAAAAGACTGCAGATCCTCTGTATCAACCCTGGGTTATTCCACATTCCTGCGGCGAGACCTGCGGCAAGCTCCTGCAACCAGAGTGTGGTCACAAATGCGTGTTGCTCTGCCATCCTGGTCCATGTCCGCCCTGCGCAAAGATGGTGTCTGTTAAATGTTACTGCGGCAAGCTACCGGCGCAACCGCGACGTTGCAATGCTAAAAACTGGAGCTGCGGAACTGTGTGCAACAAAAAATATGAATCTTGTCTACACACTTGTAATAGCCTATGTCATACTGGAGAATGTCCCCCTTGTGTAGAAACAGTATTACTGAAATGCCGTTGTAAGAGTAATGAGAAGGTAGGGAAGTGCTACGAGGGTACGTGGATTTGCGAGAAACCTTGTAATAGGAAATTCTCTTGCAACGTACATAGCTGCGAGAGTACTTGTCATCTGCCTGGCGATTGTGGCAACTGCCCCCTGGAAAAGAACAGATGTTGTCCTTGTGGAAAAAAACGATATGAAGTTTCTTGCAGGCAACAGCAAGTGCCAACGTGCGGTGATACATGCGGCAAGTTGTTGGATTGCGGGTCGCACTTTTGCAACATGAGATGCCACACCGATCGTTGTGGTCAGTGCTTGGAAGTCGTAATGAAAACGTGCAGATGCAGCAGTTATATGAAAGAGGTCGCCTGTGCGAAGGAGTTCCATTGCAATAAGAAATGTATACAAATGCGCTTATGCGGTAGacatttatgcaataaaaaatgctgCGACTGCATATCGAAGAACACGTCTAATCCCTGTGAGAAAATATGCGAAAATACGCTTAACTGCCGTAAGCACAAATGCGCCGCGCCTTGTCACAGCGGTCCTTGCTATCCATGCACTAGAACGGATGTCATACAGTGTCGATGCGGCAGCAGCAAGATAACAGTGCCATGCGGTACCAGAAAAAGGATCAAGCCACCACCGTGTAACAAATCCTGCAAGATCCCACCTATCTGCCACCACAGCAAGAGGGAAACGCACAAATGTCATCAAGGCCCATGTCCGCCGTGTAAAAAAATCTGCGGACTGATGCACAAGAGATGCGGTCACTCTTGCCCAGCCACTTGTCATACCAAAGTCTGGATGAAGATTAGAGCGAACGGAATAAAAGCGCAGCCTATTGGACCCTGGGAAAAACAGAAAGACGTTATGGAACTGAAAACTTTGCCTTGTCCACCGTGTGAGATTTCTGTACCTGTGACTTGTCTCGGTGGTCACGAGGTGCGCCCTTGGCCGTGTCACACGTCGAAACCGAGCTCCTGTGGCAGACTTTGCGGCCAGGTACTACCATGCAAGAATCATACCTGCGAGTTGACTTGTCACAAACTACAAACTTCTGATGACGAGTCTAATAGCGGTACTCCGTGCCTGAAATGCGAGAAGCTATGCAAATTAGCACGACCGCCGGGCTGTACGCATACGTGCCCGCAACCTTGTCACCCAGCACCATGTAAACCATGCAAGCAATTCGTGCGAGTCTCTTGCCATTGTGGTATTAGCACCCTTTACCAGCATTGTGTAAACTTGACATCTGCAACGAGTGAGGAACGCGATGAGTTACTCAAATGTGGAAACCAAtgcccaaaaaatTATCTATGCGGCCACCGTTGCATGAATAAATGTCATCCAGGAAAATGCCAAGGCGGGGAGGGCTGCAACAAGAGAGTTAAATTATGGTGTAAGTGTAAACGAATCAAGAAGGATTACCTTTGTTCACCTCTTCAGAAGTGCTTTGTCAAGCTTACTGTAGAGTGCGATAGCGTGTGCGAGTCATTgaagaatgaaagaaagaagGCCCAGGAAGCTATAATAGCTAAGAAGCTGGAGGAAGAGAAACTGCGCAATCAGGAAGAGATTGAGAAATTCGAAAAGAAATTCAAGCCGcgacgaaagagaaagaacaaGTATGAGAACTCGGAGCAGTCCCAAGAAAACGCAAAGAATAAATGCCGCAGCGCATGGATTTTAGCAATTATTGTAAGCGTTATAGGAATAATAGTGTATATGACTGCTTCTGACTTAAGTATACCTGGGATAAGCTGA
Protein Sequence
MQKFKRAQAQNKLSIEKHLEANALLNSSSEEEDETNEEDVQDVVGKVLSAYQGQNTDAEKVISYLVNTFQTSSAVCLICISTVKKIDAIWNCDKCYAFLHMSCILHWINDSLSCKRAKGITLIWACPKCRMEYNQDQIPRSYKCFCKKTADPLYQPWVIPHSCGETCGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTVCNKKYESCLHTCNSLCHTGECPPCVETVLLKCRCKSNEKVGKCYEGTWICEKPCNRKFSCNVHSCESTCHLPGDCGNCPLEKNRCCPCGKKRYEVSCRQQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVVMKTCRCSSYMKEVACAKEFHCNKKCIQMRLCGRHLCNKKCCDCISKNTSNPCEKICENTLNCRKHKCAAPCHSGPCYPCTRTDVIQCRCGSSKITVPCGTRKRIKPPPCNKSCKIPPICHHSKRETHKCHQGPCPPCKKICGLMHKRCGHSCPATCHTKVWMKIRANGIKAQPIGPWEKQKDVMELKTLPCPPCEISVPVTCLGGHEVRPWPCHTSKPSSCGRLCGQVLPCKNHTCELTCHKLQTSDDESNSGTPCLKCEKLCKLARPPGCTHTCPQPCHPAPCKPCKQFVRVSCHCGISTLYQHCVNLTSATSEERDELLKCGNQCPKNYLCGHRCMNKCHPGKCQGGEGCNKRVKLWCKCKRIKKDYLCSPLQKCFVKLTVECDSVCESLKNERKKAQEAIIAKKLEEEKLRNQEEIEKFEKKFKPRRKRKNKYENSEQSQENAKNKCRSAWILAIIVSVIGIIVYMTASDLSIPGIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01476621;
90% Identity
iTF_00129414;
80% Identity
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