Hsal024021.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hedya salicella
Gene Symbol
lrrfip2
Assembly
GCA_905404275.1
Location
FR990104.1:24131705-24148168[+]

Transcription Factor Domain

TF Family
LRRFIP
Domain
LRRFIP domain
PFAM
PF09738
TF Group
Unclassified Structure
Description
LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.6e-78 2.7e-73 248.3 17.9 1 258 120 369 120 392 0.91
2 2 0.14 6.5e+03 -2.5 9.2 119 165 417 463 403 473 0.44

Sequence Information

Coding Sequence
ATGGGCCATCAGTCCAAAAGTGCAACACCTGACAATAGCGACGACGAGAGCGGTGAAGCGTTCACCGACGGAGACTTTGACGACTTCGACGAACTAGACGTAGACGTAGAGCGTAGCGATGAATCCAAACCATCCCCCGTCCCTGTTAACGAGACTGTTAACCCGGAGCTCGCAGAAGTCATGGAGATCGCTCACGGCGCTCGGAATGGTTTCGATGAACACGATCATACTAAAGTTAACGGGCTTAAGAACGGAGACGGCGAGGAATGTCGCGACGCGATGCCTGACGTCCGGCGCGACTCGCACGGGGACCAGAACCCCTCCATCGTCGGCATTCTCGGTGGACAACAGGATCATgcGGAACAACGTctagcggcgcggcgcgctgcGCGGGCGGAGGCGCGCGAGATCCGCATGCGGGAGTTGGAGCGGCAACAGCGCGAGCAGGAGGACCATGCAGACAAGGCCTACGACATGTACGCCGAGACGGTGGGGCGACGAGCGGGCACCCGGCTGACGGGGCTGAGCCCCGCGCTGCACTCGCCGCGGCGCAGCTCCGAGGACTCCGCCGATGACACCTTCAACGTCAAGGATCTCAGGCACGAGTTAAAAGAAGTAGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTCGACAACGACAAGGCGGCGCTCGGCTACCAGCTCGAGCTGCTGAAGGACCGCATCGAGGAGCTGCACGAGGAATACGCACAGCTACAGCGCGAGCACAAAGAAAAATGTTCAGCCCACGAGCGTCTAAAACGCGAGCACCTGTCCCTGGAGCGCGAGCTGAGCGCGGCGCGGGACGCCGTACGCGCACGGGACGCCGCCGCCGGCGACGCCGGCTTCGCCTTCGTCGACGCCGCGCCCGCCACCAACGGCGGCGAccacgcgcccgcgccgccgccgctcgcgCTCGTGTCGCACCAGAACGAGAAGCTGCTCAACGACGCGGGGGAGGGCACGCTCGACGTGCGGTTGCAGAAGCTCCTGAGCTCGAAGCAGTCGTTGGAGGGCGAGGTGCGGCGCCTCAAGCTGCAGCTCAACGAGGAGCGCCACAATGGCGTCGCGCGACACGACCCCGACCTCGAGTCCGAGCTGGAGGCGCTCCGCAAGTCGTGCGCGGAGGCGAaggcgcgcgcggcgcgaggCGAGGCGGAGGCGGCGCTGcaggcggcgggcgcggcgcggctgGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCGCGCGACGACGCCGAGGAGCAGCTCAAGCAGGAGCGCAGGAAGCTGCAGAGAGAGGCCCGCGAAGCCCTGAACCGCGTCGAGGAGTTGGAGACGGAGAACAGCCACCTGACGAAGCGGCTCGACAAGCTCAAGAACGCCAAGTCCGCGCTGCTCAAGGACCTGTGA
Protein Sequence
MGHQSKSATPDNSDDESGEAFTDGDFDDFDELDVDVERSDESKPSPVPVNETVNPELAEVMEIAHGARNGFDEHDHTKVNGLKNGDGEECRDAMPDVRRDSHGDQNPSIVGILGGQQDHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGTRLTGLSPALHSPRRSSEDSADDTFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHLSLERELSAARDAVRARDAAAGDAGFAFVDAAPATNGGDHAPAPPPLALVSHQNEKLLNDAGEGTLDVRLQKLLSSKQSLEGEVRRLKLQLNEERHNGVARHDPDLESELEALRKSCAEAKARAARGEAEAALQAAGAARLAAQLQRLKAQADARDDAEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL*