Ebil023241.2
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000265.1:1902793-1918564[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-75 2.3e-71 241.7 22.4 1 265 119 381 119 407 0.91 2 2 0.7 1.4e+04 -3.9 9.8 123 166 427 470 409 479 0.50
Sequence Information
- Coding Sequence
- ATGGGCCTTCAGTCCAAAAGCGCAACACCTGACAATAGCGACGAGGAGAGCGGTGAACCGTTCACCGACGGAGACTTCGGTGATTCCGATGACGAAATAAACATAGAAGTAGACGTAGTAGATCGTAGCGATGATTCCAAAACGTCCCCGGTCCCTGTCGAAACGGTTAACACGGAGCTCGCAGGCATGGAGGTCGCGCACGGCGCCCGCAATGGTTTCGAACACGATCATGCTAAAGTGAACGGAGTCAAGAACGACGGCGGGGAATGTGTCGCGATGCCCGAGGTCCGGCGCGAATCGCACGGCGAGCAGAATCCCTCCATCGTCGGCATTCTCGGCGGACAACAGGATCATGCGGAGCAACGGCTAGCGGCGCGTCGTGCGGCTCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTCGAgcggcagcagcgcgagcaGGAGGACCATGCTGACAAGGCCTACGACATGTACGCCGTGAACATTCCAGAGACGGTGGGTCGGCGCGCGGGCACCCGATTGACGGCGCTGAGCCCCGCGTTGCACcacacgccgcgccgcgcctccGAGGACTCCGCCGATGACTCCTTCAACGTCAAGGATCTCAGGGGGGAGTTAAAAGAAGTAGAGGAGAAGTTCCGAAAGGCCATGATCCTGAACGCACAGCTGGACAACGACAAAGCGGCACTGGGTTATCAGCTCGAGCTACTGAAGGACCGAATTGAGGAGCTACAGATGGACTACGCGCAGTTACAGCGCGAGCACAAAGAGAAATGCTCCGCCCACGAGCGTCTAAAACGCGAGCACGCGTCCCTCGAGCGGGAGCTCGGCTCCGCGCGGGACGCGGTCCGGGCGCGGGACGCGGCGGCCGCGGACGCGGGCTTCGCGTTCGTGGACGCGGCTCCCGCGGCCAACGGCGACGAGGGACAGGTGCACGCGTTCCCGCCGCTGGCGCTCGTGTCGCACCAGAATGAGAAGTTGCTGAATGACGCGGGAGAGGGGACGCTAGACGTCCGGTTGCAAAAGCTGCTAAGCGCGAAGCAGTCTCTAGAAAGCGAGGTGCGGCGCCTCAAACTGCAGTTGAACGAGGAGCGACACAACGGCGTGGCGCGCGCGCACGACCAGGACCTTGAGTCAGAACTGGAGGCCCTCCGCAAATCAAACGCGGAAGCGAAGGCGCGCGTGGCGAGGGCGGAGGCCGAGGCGGCGCTGCAggccgcggcgggcgcgcggctcgCGGCGCAGCTGCAGCGGCTCAGGGCGCAGGCCGACGCCCGCGACGACGCCGAGGAACAGCTCAAGCAGGAGCGGAGGAAGCTGCAGAGAGAGGCCCGGGAGGCGCTGAACCGAGTGGAGGAGCTAGAGACGGAGAACAGCCATCTCACCAAGCGGCTCGACAAACTCAAGAACGCCAAGTCCGCACTACTCAAGGAGCTGTGA
- Protein Sequence
- MGLQSKSATPDNSDEESGEPFTDGDFGDSDDEINIEVDVVDRSDDSKTSPVPVETVNTELAGMEVAHGARNGFEHDHAKVNGVKNDGGECVAMPEVRRESHGEQNPSIVGILGGQQDHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAVNIPETVGRRAGTRLTALSPALHHTPRRASEDSADDSFNVKDLRGELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELQMDYAQLQREHKEKCSAHERLKREHASLERELGSARDAVRARDAAAADAGFAFVDAAPAANGDEGQVHAFPPLALVSHQNEKLLNDAGEGTLDVRLQKLLSAKQSLESEVRRLKLQLNEERHNGVARAHDQDLESELEALRKSNAEAKARVARAEAEAALQAAAGARLAAQLQRLRAQADARDDAEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00772899;
- 90% Identity
- iTF_00660334;
- 80% Identity
- -