Epro035650.2
Basic Information
- Insect
- Eudemis profundana
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947034915.1
- Location
- CAMQQJ010000459.1:607727-622278[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.2e-65 9.3e-61 207.0 11.7 1 221 119 330 119 340 0.91 2 3 8.5e-16 1.9e-11 45.1 1.6 195 263 355 423 338 450 0.78 3 3 0.23 5e+03 -2.2 8.8 120 166 467 513 452 522 0.44
Sequence Information
- Coding Sequence
- ATGGGCCATCAGTCCAAAAGCGCAACACCTGACAATAGCGACGATGAGAGCGGTGAAGCGTTCACCGACGGTGACTTCGACGACTTTGACGAATTAGACGTAGACGTAGAGCGTAGCGATGAATCCAAAACGCCCCCCGTCCCTAACGAAACAGTTAACCCGGAGCTCGCAGAAGTAATGGAGATCGCTCACGGCGCTCGGAATGGTTTCGATGAACACGATCATGCTAAAGTTAACGGGCTCAAGAAAGGCGACGGCGAGGAATGTCGCGACGCGATGCCTGACGTCCGGCGCGACTCGCACGGCGACCAGAACCCCTCCATCGTCGGCATTCTCGGCGGTCAACAGGATCATGCGGAACAACGGctagcggcgcggcgcgcggcgcgggcggAGGCGCGCGATATCCGCATGCGCGAGTTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCTGACAAGGCATACGACATGTACGCTGAGACGGTGGGGCGGCGCACGGGCACCCGGCTGACGGGGCTGAGCCCCGCGCTGCATTCACCGCGGCGCAGTTCCGAGGACTCCGCCGATGACACCTTCAACGTCAAGGATCTCAGGCACGAGTTGAAAGAAGTGGAAGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTCGACAACGATAAAGCGGCGCTCGGGTACCAGCTCGAACTGTTGAAGGACCGCATCGAGGAGCTACACGAAGAATACGCGCAGCTACAGCGCGAGCACAAGGAGAAATGCTCGGCCCACGAGCGGCTAAAACGCGAACACGTGTCGCTGGAGCGCGAGCTGGGCGCGGCGCGGGACGCCGTGCGCGCGCGCGACGCGGCCGCCCGCGACGCGGGCTTCGCGTTCGTCGACGCCGCGCCCGCGCACAATGGCGGCGATGTGCCGTCGCTGCCGCCGCTGGCGCTAGTGTCGCACCAGAACGAGAAGCTGCTGAATGACGCCGGGGAGGGGACGCTCGtggccaCCGCTAAACGCGCGCGCGACGCGGGCTTCGTGTTTGTTAACGCTGCACCCGCCCACAATGGCGGCGATGTGCCGTCGCTGCCGCCGCTGGCGCTAGTGTCGCACCAGAACGAGAAGCTGCTGAATGACGCCGGGGAGGGGACGCTCGACGTGCGGTTGCAGAAGCTGCTGAGCGCCCGGCAGGCGCTGGAGGGCGAGGTGCGGCGCCTCAAGCTACAACTCAACGAGGAGCGACACAACGGAGTCACCCGCCACGACCAGGATCTCGAGTCCGAACTGGAGGCGCTACGCAAATCGTGCGCGGAGGCAAAGGCGCGCGCGGCACGAGCCGAAGCAGAGGCGGCACTACAGGCGGCCGGCGCGGCACGTCTCGCCGCGCAGTTGCAGCGGCTTAAGGCGCAGGCCGATGCCAGAGACGATGCGGAGGAACAACTCAAACAGGAACGCAGAAAGCTACAGAGAGAGgcCCGGGAAGCGCTGAACCGAGTTGAGGAGTTGGAAACAGAGAACAGCCACCTGACGAAGCGCCTCGACAAACTGAAGAACGCAAAATCCGCGCTACTGAAGGAGCTGTGA
- Protein Sequence
- MGHQSKSATPDNSDDESGEAFTDGDFDDFDELDVDVERSDESKTPPVPNETVNPELAEVMEIAHGARNGFDEHDHAKVNGLKKGDGEECRDAMPDVRRDSHGDQNPSIVGILGGQQDHAEQRLAARRAARAEARDIRMRELERQQREQEDHADKAYDMYAETVGRRTGTRLTGLSPALHSPRRSSEDSADDTFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHVSLERELGAARDAVRARDAAARDAGFAFVDAAPAHNGGDVPSLPPLALVSHQNEKLLNDAGEGTLVATAKRARDAGFVFVNAAPAHNGGDVPSLPPLALVSHQNEKLLNDAGEGTLDVRLQKLLSARQALEGEVRRLKLQLNEERHNGVTRHDQDLESELEALRKSCAEAKARAARAEAEAALQAAGAARLAAQLQRLKAQADARDDAEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00772899;
- 90% Identity
- -
- 80% Identity
- -