Dang008192.1
Basic Information
- Insect
- Ditula angustiorana
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963691745.1
- Location
- OY829475.1:1588817-1597792[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.3e-75 2.4e-70 237.9 21.8 1 265 121 383 121 407 0.88 2 2 0.08 2.3e+03 -1.8 8.8 120 170 422 469 412 481 0.48
Sequence Information
- Coding Sequence
- ATGGGCAATCAATCCAAAAGTGCAACGCCTGACAATAGCGACGAGGAGAGCGGGGAGGCGTTCACTGACGGAGACTTTGGCGACTCCGATGTAGAGTTAAACGTAGAACGCAGCGATGATTCTAACACTAACCTTATCCCAGTTAGCGAAACGGCGAATACAGAAGTCATGGAGCTCACTCGCGGTGCTCGTAATGGTTTCGATGAACACGATCATATTAAAGTTAACGGGCATAAAAGCAGTGATAGTGACTTGGAATGTCGCAGCAACGGCGAGCTCGCGATGCCTGACGCCCGGCGGGACTCGCACGGTGACCAGAACCCTTCGATCGTCGGCATTCTCGGTGGTCAACAGGATCATGCGGAGCAGCGCctagcggcgcggcgcgcggcgcgggcggagGCGCGCGAGATACGCATGCGTGAGCTGGAGCGCCAGCAGCGCGAGCAGGAGGACCATGCTGACAAGGCCTACGACATGTATGCCGAGACGGTggggcggcgcgcgggcgggcgGCTGGGCGCGCTGGCGCCGGCCGCGCTGCTgtcgccgcgccgcgcctccGAGGACTCCGCCGACGACACCTTCAACGTCAAGGACCTCCGGCACGACCTGAAAGAAGTGGAGGAGAAGTTCCGTAAGGCTATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGGGCTACCAGCTGGAGCTGCTGAAGGACCGCATCGAGGAGCTGCACGCCGAGTACGCGCAGCTGCAGCGCGAGCACAAAGAGAAATGTTCAGCCCACGAGCGGCTAAAACGCGAGCACGCGTCCCTGGAGCGCGAGCTGGTGGCGGCGCGCGACGCGGTGCGCGCGCGggacgcggccgccgccgccgccggcttcGCCTTCGTggacgccgcgcccgccgccaacgGCCTCAACAACAACCACGCGCCCGCAacgcccgccgcgcccgagcTCGCGCTCGTCTCGCACCAGAACGAGAAGCTGCTCAACGACGCCGGGGAAGGCACGCTAGACGTGCGGTTGCAGAAGCTGCTGAGCTCGAAGCAGAGCCTCGAGGGCGAGGTGCGGCGCCTCAAGCTGCAGCTCAGCGAGGAGCAGCACAACGGCgtcgcgcgcgccgccgaccACGACCTCGAGAGCGAGCTGGAGGCGCTCCGCAAGTCGACGGCGGAGGCGAAGGCGCGCGCGACGCGGGCGGAGGCCGAGGCGGCGCTGCAggcggccggcgccgcgcgcctcGCCGCGCAGCTGTCGCGCGTCAAAGCACAGCACGACGCGCGCGACGAGCAGGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGAGAGGCGAGGGAAGCCCTGAACCGAGTAGAAGAATTAGAAACCGAGAACAGCCATCTGACGAAGCGGCTCGACAAACTGAAGAACGCGAAGTCGGCACTACTCAAGGAACTGTGA
- Protein Sequence
- MGNQSKSATPDNSDEESGEAFTDGDFGDSDVELNVERSDDSNTNLIPVSETANTEVMELTRGARNGFDEHDHIKVNGHKSSDSDLECRSNGELAMPDARRDSHGDQNPSIVGILGGQQDHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGGRLGALAPAALLSPRRASEDSADDTFNVKDLRHDLKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHAEYAQLQREHKEKCSAHERLKREHASLERELVAARDAVRARDAAAAAAGFAFVDAAPAANGLNNNHAPATPAAPELALVSHQNEKLLNDAGEGTLDVRLQKLLSSKQSLEGEVRRLKLQLSEEQHNGVARAADHDLESELEALRKSTAEAKARATRAEAEAALQAAGAARLAAQLSRVKAQHDARDEQEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00772899;
- 90% Identity
- iTF_01134806;
- 80% Identity
- -