Dnig013884.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nigromelanica
Gene Symbol
nfxl1
Assembly
GCA_004149445.1
Location
SCDR01000101.1:107984-112229[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2.7e+04 -7.8 6.4 15 19 148 152 147 152 0.82
2 18 0.11 1.4e+03 -0.0 0.4 4 10 183 189 182 189 0.95
3 18 5.3e-08 0.0007 20.1 15.5 1 18 197 213 197 214 0.98
4 18 1.4 1.8e+04 -3.6 2.8 6 10 240 244 239 244 0.89
5 18 8.1e-09 0.00011 22.7 16.1 1 19 250 269 250 269 0.98
6 18 0.91 1.2e+04 -3.0 1.2 5 10 293 298 293 298 0.93
7 18 1.1e-07 0.0015 19.1 13.1 1 19 304 324 304 332 0.90
8 18 0.73 9.7e+03 -2.7 0.5 1 7 348 353 347 355 0.49
9 18 1.9e-07 0.0025 18.3 10.9 1 18 358 375 358 376 0.96
10 18 0.57 7.6e+03 -2.4 0.4 1 5 385 389 385 394 0.73
11 18 0.00029 3.9 8.2 17.2 1 18 410 427 410 428 0.97
12 18 2.7e-08 0.00036 21.0 14.7 1 19 437 455 431 455 0.90
13 18 0.9 1.2e+04 -3.0 2.0 6 10 483 487 483 487 0.98
14 18 2.8e-05 0.37 11.4 6.2 9 18 500 509 498 510 0.92
15 18 0.0036 48 4.7 4.8 1 11 522 531 522 532 0.95
16 18 0.28 3.7e+03 -1.4 1.2 6 10 585 589 584 589 0.85
17 18 8.5e-07 0.011 16.3 5.5 1 11 595 605 595 606 0.96
18 18 0.01 1.3e+02 3.2 16.1 3 18 635 650 634 651 0.93

Sequence Information

Coding Sequence
ATGGAAAAGTTTAATAAAGTGCAGGCCAAAAACTTGGCAGCCGCACAGAAGCTGGTGGATGCCTACGCCTCCAGTTCGGAGGATGAAGGCGAACTGGATGAGAAGCACATACTTGATCTTCTCTACAAGCATTATCAGGCTCCCGCCAaaggcagcgacaacaatgcAAATCGCACAGCCACCTTCCTGGAGAACACCCTTCACTCTGGCGCGGCAACGTGCCTGATCTGCATTGGCAGCATAAAACGTGTGGAGTCCATTTGGTCCTGCAAGAGTTGCTATTGCTTCTTCCATCTGAACTGCATCCAGCGCTGGGCCAACGATAGCGTCATGCAAATGAAGGTCAaggcggagcagcagcagcagaacagcAACCAGGGCCACTACAATCATCTGGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGCTGCACTGGTGCTGTCCACAGTGTCGCCGGGATTATCAACCCGCCGATCGGCCGACGGCGTACGAGTGCTTCTGCGGCAAGGAGGTGAATCCGCCGGCGCAGCCATTTCTCGTGCCGCACTCCTGTGGCGAAATCTGCGgcaagctgctgcagccgaaATGCGGCCACGACTGCAAGCTACTCTGCCATCCGGGCCCCTGTCCGCCGTGCGCCCAACTCGCGCAGAGCTCCTGCCTCTGCGGCAAGTCGCCGCCGCGCTCGACACGCTGCATCGACAAGACCTGGCAGTGCCAGCAGAAGTGCCAAGCGCTGCTGGCGTGTGGCAAGCACAAGTGCAACCAGCTCTGCCATCGTCCTGGCCAGTGCCCGCCCTGCAGCAGCAAGAGCTCGCAGTCCTGCGAGTGCAAGCGCGAGACGAAAGTCGTCAACTGTGCCGAGCCCAAATGGAAGTGCACCAATgTGTGTGGTGCTCCGTTTGCTTGCGGACTGCACCGCTGCGAGAAAGTTTGCCACGCTGGCTCCTGTGGCGGCGGCGACTGTCCGCTGGGCGTGCGTAGCTGTCCCTGCGGCAAGAGCATCAAAACTGGCGGCTGCAGCGAGGTGGCGGAAACCTGCGGCGACACCTGCCAGAAGCTTTTATCCTGTGGCAAGCATAGCTGCACGCAGCGCTGTCATCGCGGCGCTTGCAATTTGTGTTTGGTGCGCACCAAGAAGAAATGTCGCTGTGGCCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAACTGATGCGCGATTGCGGCAAGCATGCCTGCAATCGCAAGTGCTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAGTCCGTCTGCCACAACGGGCCGTGTTATCCGTGCAAGCTGGAGTCGCAGATCAACTGCCGCTGCGGCAAGACGCGACGCAGTGTGCCCTGCGGCCGGGAGAAGAGTGCGCGCATTGTCTGCCAGGAGCTCTGTCGGATTACGGCCAAGTGTCATCATGCCATAAAGCATCGCTGCCACAAGGGCGAGTGTCCGCCGTGCTTTCAGCCGTGCGGCCTGCCCAACGATGCCAGCAACTGTGGCCACATCTGCAGGGCGCCCTGCCATGCGGCCCAACGCGTGTCCAAACCAGCGGATGCGCCACGCTCGCGCAAGTATGAGTACCGCAGGCTGCCGCATCCGCGCTGCGAGGAGGGCGTCAGCGTCACCTGCATCGGTGGACACGAGTTGGCCGTTTGGCCCTGCTGGAACTCCAAGCCGTCGTCCTGCCAGCGCCCGTGTGCGCGCCAACTGAAGTGCGGCAATCACAAGTGCGCTCGCGTCTGTCACGcggtgccgctgccgcaggaCATGCTGCAGCAGGCCGGCTGTGCGGACTGCGAGGAGGGCTGCGCCATACCGCGTCCCGCCGGCTGCACACACGCCTGTCCCAGGGCCTGCCATCCGCCGCCCTGCGCCCCCTGCGGCTTCGTCATCAAGAGCAAATGCTTCTGCGGCCTCAACCAGGTCGTCTACAAGTGCAGCGACTACTTCGACATGAAGGGCAACGAGGCGGAGATCGCGGAGCGCCGACAACAGTTCAACAGCTGTGGCAACCGTTGCCTGAAGAAT
Protein Sequence
MEKFNKVQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQAPAKGSDNNANRTATFLENTLHSGAATCLICIGSIKRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQQNSNQGHYNHLGEFVPPKRPKSLHWCCPQCRRDYQPADRPTAYECFCGKEVNPPAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSPPRSTRCIDKTWQCQQKCQALLACGKHKCNQLCHRPGQCPPCSSKSSQSCECKRETKVVNCAEPKWKCTNVCGAPFACGLHRCEKVCHAGSCGGGDCPLGVRSCPCGKSIKTGGCSEVAETCGDTCQKLLSCGKHSCTQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKLMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCQELCRITAKCHHAIKHRCHKGECPPCFQPCGLPNDASNCGHICRAPCHAAQRVSKPADAPRSRKYEYRRLPHPRCEEGVSVTCIGGHELAVWPCWNSKPSSCQRPCARQLKCGNHKCARVCHAVPLPQDMLQQAGCADCEEGCAIPRPAGCTHACPRACHPPPCAPCGFVIKSKCFCGLNQVVYKCSDYFDMKGNEAEIAERRQQFNSCGNRCLKN