Dqud006524.1
Basic Information
- Insect
- Drosophila quadrilineata
- Gene Symbol
- nfxl1
- Assembly
- GCA_018150725.1
- Location
- JAECWN010000323.1:3942010-3945130[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.6e+04 -8.1 6.4 15 19 152 156 151 156 0.82 2 18 0.13 1e+03 -0.3 0.4 4 10 187 193 186 193 0.95 3 18 6.5e-08 0.00053 19.8 15.5 1 18 201 217 201 218 0.98 4 18 2 1.6e+04 -4.2 2.5 6 10 244 248 243 248 0.88 5 18 2.8e-07 0.0022 17.8 17.7 1 19 254 273 254 273 0.98 6 18 1.3e-05 0.11 12.4 13.9 1 19 308 328 308 328 0.98 7 18 0.89 7.2e+03 -3.0 0.5 1 7 352 357 351 359 0.49 8 18 1.5e-08 0.00012 21.8 11.6 1 18 362 379 362 380 0.97 9 18 0.7 5.7e+03 -2.7 0.4 1 5 389 393 389 398 0.73 10 18 0.00036 2.9 7.9 17.2 1 18 414 431 414 432 0.97 11 18 3.3e-08 0.00027 20.7 14.7 1 19 441 459 435 459 0.90 12 18 0.37 3e+03 -1.8 1.1 6 10 487 491 486 491 0.92 13 18 4.3e-05 0.35 10.8 7.5 9 19 504 514 502 514 0.89 14 18 0.2 1.6e+03 -0.9 4.8 4 11 528 535 526 536 0.85 15 18 3.3e-06 0.027 14.4 4.2 1 11 602 612 602 613 0.96 16 18 0.29 2.3e+03 -1.4 18.0 3 18 642 657 628 658 0.91 17 18 1.7 1.4e+04 -3.9 1.6 8 13 663 668 662 668 0.74 18 18 8.6e-05 0.7 9.8 9.4 1 17 703 721 703 723 0.86
Sequence Information
- Coding Sequence
- ATGGAAAAATTCAATAAAGCTCAAGCCAAAAATTTAGCTGCAGCGCAGAAACTAGTCGATGCTTACGCCTCCAGTTCAGAGGATGAGGGCGAATTGGATGAGAAGCATATTCTCGATCTACTGTACAAACATTACCAGAACACGCCGGAGGCCACCACGGGCAGCAAGCGCAAGGACAACAATGCGAATCGCACAGCCACATTTCTTGAAAACACCTTGCACTCGGGCGCCGCCACTTGCCTCATTTGCATTGGCAGCATACGTCGAGTGGAGTCCATCTGGTCGTGCAAGAGCTGCTATTGCTTCTTCCATCTGAACTGCATCCAGCGCTGGGCCAACGATAGCGTCATGCAAATGAAAGTGAAGGCGGAGCAGCAGAATGGAAACCAGGGTCACTACAATCACCTGGGAGAGTTTGTGCCGCCCAAGCGTCAGAAATCTCTACACTGGTGTTGCCCACAGTGTCGCAGAGATTACCAGCCCACAGATAAACCCACCCAGTACGAATGTTTCTGCGGCAAAGAGGTGAATCCACAGCCTCAGCCATTCCTTGTACCGCATTCCTGCGGGGAGATCTGTGGCAAGCTCCTACAACCCAAATGTGGACACGACTGTAAGTTACTTTGTCATCCCGGACCGTGTCCGCCATGCGCTCAACTGACGCGCAACTCGTGTCTATGTGGCAAATCCGAACCACGTTCGGCACGCTGCATCGAGAAGAACTGGCAATGCCAGAAAAAGTGTCAAGCATTATTGCCGTGTGGCAAGCATAAATGCAATCAGCAATGTCATCGGCCTGGGCAGTGCCCGCCATGCAGCAGCAAAAGCTCCCAGCCTTGCAACTGCCAGCGTGAGCAGAAGATCGTCAATTGCTCCGATCCCAAATGGAAGTGCGGAAATGTCTGCGGTGGCACCTACGCCTGCGGCTTGCATAAGTGCGAGCAGCGTTGCCATGATGTTAACTGTGGTGGCGAACCCTGCCCATTGGGCGTGCGCAGTTGTCCCTGCGGCAAGAACGTGAAATCGGGCTCCTGCAGCGAGGAGGTGGAAACTTGTGGTGATACCTGTCAGAAGCTGTTGTCTTGTGGCAAACATTACTGCGCTCAGCGCTGTCATCGTGGTCCTTGCAACACTTGCTTGGTGCGCACCAAAAAGAAGTGTCGCTGCGGCCTGCATGAGAAGGAGTTGCCTTGCTCCAAGGACTTCAATTGTGAGACGAAATGTAAACAGTTGCGAGATTGTGGCAAGCATGCCTGTAATCGTAAGTGCTGCGGCGATCAGTGTCCGCCTTGTGAGAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAACACAAGTGTCAGTCTGTTTGCCACAACGGACCATGCTATCCCTGCAAGCTGGAATCCCAGGTGAACTGTCGCTGCGGCAAAACCAAACGCAGCGTGCCCTGTGGACGTGAACGCAGTGCACGCATTGCCTGCCAGGAGCTATGCCGTATAACACCCAAGTGTCACCACGCCATCAAGCATCGCTGCCACAAAGGCGAGTGTCCGCCTTGCACTCAGCCCTGCGCTTTGCCCAACGATACCAGCGGCTGTGCCCACATCTGCAAAGCGCGTTGTCACGCAGCGCAACGAATCGCCAAGCCAGCGGATGCTACAGCGCGTGGCAATGCACGGAAGTATGAGTATCGTGCTCTGCCTCATCCACGCTGTGAGGAGGGTGTTAAGGTAAGTTGCATTGGCGGCCATGAGCTTGCCACTTGGCCCTGTTGGAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGTGTGGGAATCACAGATGCGCATTAGTTTGCCATGCAGTGCCCAATCCACAGGACATGCAGCAACAGGTGGGATGTGCGAATTGCGAACAAGGCTGTGGAATACAGCGTCCAGAGGGCTGTGTACATGCCTGTCCCCGTGGTTGTCATCCACCACCCTGTTCGCCTTGCGTCCAGGCCATCAAGAGTAAGTGCCACTGTGGACTCAATCAGCTGGTATACAAGTGCAGCGAATATAACAATCCGACAAACATGGATAAAGAGAAGTTGAGGAGTTGCGGCAATCGTTGTCTCAAGAATTTTGCCTGTGGACATCGCTGCTTAAGCATCTGTCACTCAGCCGCATGTCCCAATCCCGAACAATGCCGCAAGAAAGTGCGCATATTTTGCGCCTGCAGACGCCTCAAGTTGGAGATCGCCTGCGATAAACATCGCGCTGGACAAACCATGCTAGACTGTGATAGCAGTTGTCAGGCCGAGCTTAGTAAAGCAGCTGCTACGGAGCAACAGCAGCTGCAGCAAAAACTGCGGGAGGAGCAGGAAAAGAATCGCATTGAATTGGAGAAATTTGAGCAGAAGTTCGGCAAGCGGAAGCACAAAGAGCGTAAAGCCGTCGACGTGGCAACGACCAAAAAGGACATCAATTGGCAACGTTTGGGCATCTATGCCATCTGCCTGCTGATGGTGCTGGGAGCTCTAGCTGTTGCATACTATGCCGAGAGCTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQNTPEATTGSKRKDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPTDKPTQYECFCGKEVNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLTRNSCLCGKSEPRSARCIEKNWQCQKKCQALLPCGKHKCNQQCHRPGQCPPCSSKSSQPCNCQREQKIVNCSDPKWKCGNVCGGTYACGLHKCEQRCHDVNCGGEPCPLGVRSCPCGKNVKSGSCSEEVETCGDTCQKLLSCGKHYCAQRCHRGPCNTCLVRTKKKCRCGLHEKELPCSKDFNCETKCKQLRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTKRSVPCGRERSARIACQELCRITPKCHHAIKHRCHKGECPPCTQPCALPNDTSGCAHICKARCHAAQRIAKPADATARGNARKYEYRALPHPRCEEGVKVSCIGGHELATWPCWNSXXXXXXXXXXXXXKCGNHRCALVCHAVPNPQDMQQQVGCANCEQGCGIQRPEGCVHACPRGCHPPPCSPCVQAIKSKCHCGLNQLVYKCSEYNNPTNMDKEKLRSCGNRCLKNFACGHRCLSICHSAACPNPEQCRKKVRIFCACRRLKLEIACDKHRAGQTMLDCDSSCQAELSKAAATEQQQLQQKLREEQEKNRIELEKFEQKFGKRKHKERKAVDVATTKKDINWQRLGIYAICLLMVLGALAVAYYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- -
- 80% Identity
- -