Dsta005406.1
Basic Information
- Insect
- Drosophila stalkeri
- Gene Symbol
- nfxl1
- Assembly
- GCA_035047405.1
- Location
- JAWNPR010000041.1:19343491-19346564[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.9e+04 -8.1 6.4 15 19 149 153 148 153 0.82 2 19 0.13 1.2e+03 -0.3 0.4 4 10 184 190 183 190 0.95 3 19 6.5e-08 0.00062 19.8 15.5 1 18 198 214 198 215 0.98 4 19 9.7e-08 0.00092 19.3 17.0 1 19 251 270 251 270 0.98 5 19 0.73 6.9e+03 -2.7 0.8 5 10 294 299 294 299 0.93 6 19 6.8e-06 0.065 13.4 10.6 1 17 305 323 305 332 0.87 7 19 0.89 8.4e+03 -3.0 0.5 1 7 349 354 348 356 0.49 8 19 1.6e-07 0.0015 18.6 10.1 1 18 359 376 359 377 0.96 9 19 0.7 6.6e+03 -2.7 0.4 1 5 386 390 386 395 0.73 10 19 0.00036 3.4 7.9 17.2 1 18 411 428 411 429 0.97 11 19 3.3e-08 0.00032 20.7 14.7 1 19 438 456 432 456 0.90 12 19 0.37 3.5e+03 -1.8 1.1 6 10 484 488 483 488 0.92 13 19 3.6e-05 0.34 11.1 6.8 9 18 501 510 499 511 0.90 14 19 0.011 1e+02 3.1 5.6 1 11 523 532 523 533 0.95 15 19 1.7 1.6e+04 -3.9 1.1 6 10 588 592 587 592 0.85 16 19 3.4e-06 0.032 14.3 5.5 1 11 598 608 598 609 0.96 17 19 0.023 2.2e+02 2.1 15.4 3 19 638 654 637 654 0.92 18 19 0.23 2.2e+03 -1.1 0.7 6 12 695 701 694 701 0.83 19 19 1.1e-06 0.01 15.9 12.4 1 16 705 719 705 725 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTTAATAAAGCACAGGCCAAAAACTTGGCAGCTGCACAGAAATTAGTGAATGCTTACGCCTCCAGTTCCGAGGATGAAGGCGAACTGGATGAAAAGCATATACTTGATCTTTTATACAAACATTACAAAGCTCCAGTGAATGCTGGGAGGGACAACAATGTAAACCGCACCGCCACATTTCTAGAGAATACTCTTCACTCGGGCGCTGCTACGTGTCTAATTTGTATTGGGAGCATTCGACGCGTAGAGTCCATTTGGTCATGCAAGAGCTGCTATTGCTTCTTCCATCTGAATTGCATTCAGCGCTGGGCCAACGACAGCGTAATGCAAATGAAGGTCAAGGCGGAACAACAGCAGAGCAATGACAATCAGGGCTATTATAATCACCTGGGCGAGTTTGTGCCGCACAAGCGTACAAAGTCTCTCCACTGGTGTTGTCCACAGTGCCGTAGGGACTATCAACCAGCCGATCGGCCCACACAGTACGAATGCTTTTGTGGTAAGGAGCCAAATCCGCAGCCACAACCCTTCCTTGTGCCGCACTCCTGTGGAGAAATTTGTGGCAAACTACTGCAACCGAAATGTGGCCACGATTGCAAATTACTCTGTCATCCAGGTCCATGTCCACCCTGCGCCCAATTAGCACACAGTTCTTGTCTCTGCGGCAAAGCGCCAATGCGGAGCGTGCGGTGCATCGACAAGAGCTGGCAGTGCGAGCAAAATTGTCAATTGCTTCTGTCTTGTGGTAAGCACAAATGCAATCAGCGCTGTCACCGGCCTGGTCAATGTCCACcctgcagcagcaagagctCCCAGCCCTGCGAATGCAAACGAGAGAAAAAAGTAGTGAGCTGTGCGGAACCCAAATGGAAATGCAGCAACGTCTGTGGCGCTCTCTTTGCTTGTGGCATTCATACCTGTGATAAAGTCTGCCACGCAGAATCTTGTGAAGGCGCAGACTGTCCCTTTGGTGTGCGCAGCTGTCCCTGTGGGAAGAGCATTAAAAGTGGAGCTTGCAACGAGCAGCAGGAGACATGTGGAGACACTTGCCAGAAGCTCTTGTCCTGTGGCAAGCATAGCTGCGCACAGCGCTGTCATCGAGGTGCATGCAATttgTGTTTGGTACGCACGAAGAAAAAATGCCGCTGCGGCCTGCATGAAAAGGAGCTGCCTTGCTCCAAGGAGTTCAACTGCGAAACAAAGTGCAAACAGATGCGGGATTGTGGCAAGCATGCCTGCAATCGCAAGTGCTGTGGTGATCAGTGTCCGCCCTGCGAAAAAATCTGCGGCAAGCAGCTGAGCTGCAATAAGCACAAATGCCAGTCTGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTAGAATCGCAAGTGAATTGTCGCTGCGGCAAGACGCGTCGCAGCGTACCCTGCGGACGCGAGAAGAACGCGCGTATTGCGTGCCAGGAACTATGCCGTATTACTTCCAAGTGTCATCATGCCATCAAGCATCGCTGTCACAAGGGCGAATGCCCGCCCTGCATGCAGCTTTGTGGCTTGATCAATGATTCCAGCGGATGTGGACACATTTGCAAGGCGCGCTGCCATGCAGCGCAGCGTGTGCCTCGGCCTGAACAAGCAATACGTGGACAGCAGCACAAGTATGAGTACCGCGCTCTGCCGCACCCACGTTGCGAGGAGGAAGTCAGCGTGCGCTGCATTGGTGGGCACGAGTTGGCCACTTGGCCGTGCTGGAACTCTAAGCCTACATCCTGCCAGCGTAGGTGCGCACGCCAGCTCAAGTGTGGCAATCATCAATGTGATCGAGTCTGCCATGCGGTGCCTCAACCGGAGGATATGCAGCAGCAAGCAGGCTGTGCAAACTGTGAACAAGGCTGCTCTATTCCTCGACCTACTGGCTGCACTCATGCCTGCGCCAAAGGCTGTCATCCACCACCTTGTGCTCCATGCTCATTTGTgatcaaaaacaaatgttaCTGTGGCCTCAATCAGGTTATATACAAGTGCAGCGAGTACTACAATGAAGAGGGCAGTCTGCAGGAGACGCTGGAGCGACGCCAAAGGTTCAACAGCTGTGGCAATCGCTGCCACAAAAATTTCAATTGTGGCCATCGCTGCTTGACCGTTTGTCATCCCGGTCCCTGTCCCAATCCGGAGCTTTGTCGCAAGAAGTTGCGCATTTACTGCAAGTGCAAACGCCTAAAGCAGGAAATCGCATGCGACAAACATCGTGCAGGCCAAACGTCGCTTGAATGCGATGCCAATTGCCAGGCGGAGCGGTCTAAAGCTGAGGCcacaaagcagcaacagcagcaactgaaattgcagcaggagcaggagcggaATCGTATAGAGCTCGAGAAATACGAGCTAAAGTTCGGCAAGCGCAAGCACAAGGAGCGCAAGACTTTAGATGTCGAGCCAACCAAAGCCAACATCAATTGGCAACGTTTAGGCATCTATGTACTGTCCGTGCTGGTCGTAATGGGCGcactgggcgtggcatattaTGCAGATAGCTAG
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYKAPVNAGRDNNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQSNDNQGYYNHLGEFVPHKRTKSLHWCCPQCRRDYQPADRPTQYECFCGKEPNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKAPMRSVRCIDKSWQCEQNCQLLLSCGKHKCNQRCHRPGQCPPCSSKSSQPCECKREKKVVSCAEPKWKCSNVCGALFACGIHTCDKVCHAESCEGADCPFGVRSCPCGKSIKSGACNEQQETCGDTCQKLLSCGKHSCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKNARIACQELCRITSKCHHAIKHRCHKGECPPCMQLCGLINDSSGCGHICKARCHAAQRVPRPEQAIRGQQHKYEYRALPHPRCEEEVSVRCIGGHELATWPCWNSKPTSCQRRCARQLKCGNHQCDRVCHAVPQPEDMQQQAGCANCEQGCSIPRPTGCTHACAKGCHPPPCAPCSFVIKNKCYCGLNQVIYKCSEYYNEEGSLQETLERRQRFNSCGNRCHKNFNCGHRCLTVCHPGPCPNPELCRKKLRIYCKCKRLKQEIACDKHRAGQTSLECDANCQAERSKAEATKQQQQQLKLQQEQERNRIELEKYELKFGKRKHKERKTLDVEPTKANINWQRLGIYVLSVLVVMGALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- iTF_00559898;
- 80% Identity
- -