Drub006303.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila rubida
Gene Symbol
nfxl1
Assembly
GCA_035046165.1
Location
JAWNOF010000021.1:3557099-3560302[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 2 1.5e+04 -8.1 6.4 15 19 149 153 148 153 0.82
2 23 0.13 9.9e+02 -0.3 0.4 4 10 184 190 183 190 0.95
3 23 6.5e-08 0.0005 19.8 15.5 1 18 198 214 198 215 0.98
4 23 1.2 9.4e+03 -3.4 2.5 6 10 241 245 240 245 0.90
5 23 6.3e-08 0.00048 19.9 17.5 1 19 251 270 251 270 0.97
6 23 4.3e-07 0.0033 17.2 13.9 1 19 305 325 305 332 0.95
7 23 0.89 6.8e+03 -3.0 0.5 1 7 349 354 348 356 0.49
8 23 6.8e-09 5.2e-05 22.9 10.7 1 18 359 376 359 377 0.96
9 23 0.7 5.4e+03 -2.7 0.4 1 5 386 390 386 395 0.73
10 23 2 1.5e+04 -5.0 2.3 5 10 400 405 400 405 0.91
11 23 0.0045 34 4.4 19.2 1 18 411 428 411 429 0.97
12 23 3.4e-08 0.00026 20.7 14.7 1 19 438 456 432 456 0.90
13 23 1.2 9.4e+03 -3.4 0.7 6 10 484 488 483 488 0.87
14 23 0.00017 1.3 8.9 8.3 9 18 501 510 499 510 0.92
15 23 1.2 9.6e+03 -3.5 2.6 15 18 511 514 511 515 0.92
16 23 0.0037 29 4.6 5.5 1 11 523 532 523 533 0.95
17 23 0.86 6.6e+03 -2.9 1.4 6 10 587 591 586 591 0.88
18 23 1.2e-05 0.088 12.6 4.9 1 12 597 608 597 608 0.96
19 23 2 1.5e+04 -6.9 5.9 1 10 621 628 621 628 0.78
20 23 0.0025 19 5.2 11.9 4 18 638 652 636 653 0.94
21 23 2 1.5e+04 -5.2 2.5 4 6 658 660 657 661 0.65
22 23 0.78 6e+03 -2.8 0.6 4 10 695 701 694 701 0.81
23 23 4.2e-07 0.0032 17.2 9.2 1 16 707 721 707 727 0.93

Sequence Information

Coding Sequence
ATGGAAAAGTTTAACAAAGCTCAAGCCAAAAATTTGGCAGCTGCGCAAAAATTGATGGACACATATGCCTCCAGTTCCGAAGATGAGGGCGAACTGGATGAGAAGCATATACTGGATTTGCTATATAAGAATTACCAAACCGCACCAGGCAAAGGCAATGAAGGCAACGCTGCAAATCGCACGGCAACGTTTCTGGAGAACACCTTGCACTCTGGGGCCGCAACTTGCCTCATTTGCATTGGCAGCATTCGACGTGTGGAATCCATTTGGTCGTGCAAGAGCTGTTACTGCTTCTTCCACTTGAACTGCATTCAACGTTGGGCCAACGACAGTCTGATGCAGATGAAGGTGAAGGCCGAACAGCAGAATGGCAGCCAACAGGGATACTACAATCATCTCGGCGAGTTTGTGCCGCCCAAGCGTCAGAAGGCAATGCACTGGTGTTGTCCACAATGTCGCCGTGATTATCAACCTGGCGACCGACCCACGCAATACGATTGCTTTTGCGGCAAGGAGGCCAATCCACAACCTCAGCCGTTTCTGGTACCGCATTCATGTGGTGAAATTTGTGGAAAATTGCTCCAGCCGAAATGTGGTCACGATTGCAAGCTGCTATGTCACCCGGGACCATGTCCACCATGCGCTCAGTTGGCGCATAGCTCTTGTCTGTGTGGCAAGTCGTCAGCGCGTTCAGTGCGTTGTCTTAACAAGAACTGGCAGTGCGAGCAGACATGTCAAGCACTTTTagcatgtggcaagcacaagTGCAACCAGAAGTGCCATCGACCTGGACAGTGCCCACCGTGCACGAGCAAGAGTTCTCAGCCCTGTGAATGCAAACAGGAAACGAAAGTTGTTAATTGTTCCGAGCCCAAATGGAAATGCGGCAGAAAATGTGGCGCTCCTTTCGCTTGCGGCGTGCATTATTGCGACAAGATATGCCATTCTGGCCCTTGTGGAGGTGGCGAATGTCCTTTGAACGTGCGCAGCTGTCCCTGTGGCAAGACGGTCAAAACGGGCAGCTGTGGGGAGGTGGCAGAGACATGTGGCGACACCTGCCAGAAGTTATTACCCTGCGGAATCCACACTTGTGCCCAACGCTGTCATCGTGGTCCCTGCAATTTGTGCCTGGTGCGCACCAAAAAGAAGTGCCGATGCGGCTTGCATGAGAAAGAGCTGCCCTGCTCCAAAGAGTTCACCTGCGAAACGAAGTGCAAACAGATGCGCGATTGTGGCAAGCATGGTTGCAATCGCAAGTGCTGCGGGGATCAGTGTCCGCCGTGCGAGAAGATTTGCGGCAAGCAATTAAGCTGCAACAAGCACAAGTGCCAGTCTGTCTGCCACAACGGACCTTGCTATCCCTGCAAAATGGAGTCGCAGGTGAACTGTCGCTGTGGCAAGACTCGACGCAATGTGCCCTGTGGACGGGAGAAAAACGCACGCATTGCGTGCCCCGAGTTGTGTCGCATCACGGCCAAGTGTCATCATGCCATCAAGCATCGCTGCCACAAAGGTGAATGCCCGCCCTGCTGCCAGCCATGTGGGTTGCCCAATGACTCAAGTGGTTGTGGACACATTTGTCAGGCCCGCTGTCATGCCGCTAGCCGGGTAACCAAACCAATGGATTCGCGTTCACGGCCCAATAAGTATGAGTATCGCGCGCTGCCGCATCCACGCTGCGAGCAGCCTGTTGTCGTCACCTGCATCGGCGGCCATGAGGTGGCCACCTGGCCGTGTTGGAACTCCAAACCGTCATCGTGTCAACGCAAATGTGCGCGGAAACTGAAGTGTGGCAATCACAGTTGCGATCTCGTCTGTCATACCGTACCCAATCCCCAGGatatgcagcagcaattggGGTGTGGCAACTGTGAGCAAGGATGTCAAATTGCTCGGCCAATTGGGTGTGTACATGCTTGTGCCCGCGGCTGTCATCCAGCGCCATGTGCGCCGTGCGCGTTTGCCATCAAACACAAATGCCACTGTACTCTTAATCAGATTGTGTACAAGTGTAGTGAGTACTTCAGTGAATTGAACACAGACGGGCAGGAGGAAATGTTGCTGGAGCAGCGTGAAAAGCTGCATAGCTGCGGAAATCGTTGCATAAAGAACTTTGCCTGTGGCCATCGTTGCATGGCAATCTGTCACTCAGGCAAGTGTCCCAATTCTCAGCTTTGCCGCAAAAAGGTACGCATttactgcagctgcaagcgTATTAAATTAGAGGTGGCTTGTGACAAACATCGTGCTGGTCAAACGTCATTAGACTGCGATGACAACTGTCAAGCTGAACGCTCAAAGGCGATGGCTAcggaacaacagcagcaggagctgcggTTGCGTCAAGAGGAGGCAAAGAATAAGTTAGAGCTGGAAAAATTCGAGCAGAAATTCGGGAAACGAAAGCCCAAGGAACGCAAAGCTGTAGACGTTGAGCCCGTCAAATTGCATACAGATCGGAAGACCGTGGCTATTTATGTGGCATTCTTGCTGGTTGTAGTGGGAGCATTGGTCGTTGCATTCTATGCGGATAGTTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLMDTYASSSEDEGELDEKHILDLLYKNYQTAPGKGNEGNAANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSLMQMKVKAEQQNGSQQGYYNHLGEFVPPKRQKAMHWCCPQCRRDYQPGDRPTQYDCFCGKEANPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSSARSVRCLNKNWQCEQTCQALLACGKHKCNQKCHRPGQCPPCTSKSSQPCECKQETKVVNCSEPKWKCGRKCGAPFACGVHYCDKICHSGPCGGGECPLNVRSCPCGKTVKTGSCGEVAETCGDTCQKLLPCGIHTCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKMESQVNCRCGKTRRNVPCGREKNARIACPELCRITAKCHHAIKHRCHKGECPPCCQPCGLPNDSSGCGHICQARCHAASRVTKPMDSRSRPNKYEYRALPHPRCEQPVVVTCIGGHEVATWPCWNSKPSSCQRKCARKLKCGNHSCDLVCHTVPNPQDMQQQLGCGNCEQGCQIARPIGCVHACARGCHPAPCAPCAFAIKHKCHCTLNQIVYKCSEYFSELNTDGQEEMLLEQREKLHSCGNRCIKNFACGHRCMAICHSGKCPNSQLCRKKVRIYCSCKRIKLEVACDKHRAGQTSLDCDDNCQAERSKAMATEQQQQELRLRQEEAKNKLELEKFEQKFGKRKPKERKAVDVEPVKLHTDRKTVAIYVAFLLVVVGALVVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00595635;
80% Identity
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