Dcol010297.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila colorata
Gene Symbol
nfxl1
Assembly
GCA_035041545.1
Location
JAWNLD010000564.1:3513674-3519739[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.7e+04 -8.1 6.4 15 19 146 150 145 150 0.82
2 19 0.13 1.1e+03 -0.3 0.4 4 10 181 187 180 187 0.95
3 19 6.5e-08 0.00056 19.8 15.5 1 18 195 211 195 212 0.98
4 19 0.018 1.5e+02 2.4 2.8 6 11 238 243 237 244 0.88
5 19 1e-08 8.6e-05 22.4 16.1 1 19 248 267 248 267 0.98
6 19 1.1 9.6e+03 -3.3 0.6 5 10 291 296 291 296 0.92
7 19 5.2e-07 0.0045 16.9 15.0 1 19 302 322 302 329 0.95
8 19 0.88 7.7e+03 -3.0 0.5 1 7 346 351 345 353 0.49
9 19 2.9e-07 0.0025 17.7 9.0 1 18 356 373 356 374 0.95
10 19 0.7 6e+03 -2.6 0.4 1 5 383 387 383 392 0.73
11 19 0.00036 3.1 7.9 17.2 1 18 408 425 408 426 0.97
12 19 3.3e-08 0.00029 20.7 14.7 1 19 435 453 429 453 0.90
13 19 1.1 9.5e+03 -3.3 2.0 6 10 481 485 481 485 0.98
14 19 3.4e-05 0.29 11.1 6.2 9 18 498 507 496 508 0.92
15 19 0.0082 71 3.5 5.5 1 11 520 529 520 530 0.95
16 19 1.7 1.5e+04 -3.9 1.1 6 10 585 589 584 589 0.85
17 19 1.9e-06 0.016 15.2 4.7 1 12 595 606 595 607 0.97
18 19 0.012 1.1e+02 3.0 16.1 3 18 635 650 634 651 0.93
19 19 2.8e-06 0.024 14.6 10.9 1 16 702 716 702 722 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTTAATAAAGTGCAGGCCAAGAACTTGGCAGCCGCACAGAAGCTGGTGGATGCCTACGCCTCCAGTTCGGAGGACGAAGGCGAACTAGATGAAAAACGCATACTTGATCTTCTCTACAAGCATTATCAGGCCACGCCGGACAACAATGCCAATCGCACAGCCACCTTCCTGGAGAACACGCTGCACTCGGGCGCGGCAACGTGTCTCATTTGCATTGGCAGCATACGACGCTTGGAGTCCATTTGGTCCTGCAAAAGCTGCTATTGTTTCTTCCATCTGAACTGCATCCAGCGCTGGGCCAACGACAGCGTCATGCAAATGAAGGTCAaggcggagcagcagcagcagcagaacggCAATCAGGGTCACTACAATCACCTGGGCGAGTTTGTGCCGCCGAAGCGTCCGAAGTCGCTGCACTGGTGCTGTCCACAGTGCCGCAGGGACTACCAGCCCGCCGATCGGCCCACGGCGTACGAGTGCTTCTGCGGCAAGGAGCTGAATCCGGCTGCGCAGCCATTCCTCGTGCCGCACTCCTGCGGCGAGATCTGCGGCAAGCTGCTGCAGCCCAAGTGCGGCCACGACTGCAAGCTGCTCTGCCATCCCGGCCCGTGTCCGCCGTGTGCACAGCTTGCGCGCAGCTCGTGCCTATGCGGCAAGGCGGCGCCGCGCTCCACGCGCTGCATCGATAAGACCTGGCAGTGCCAGCAGAAGTGCCATGCGCTGCTGGCGTGCGGCAAGCACAAGTGCAACCAGCTCTGCCATCGTCCTGGCCAGTGCCCGCCCTGCAGCAGCCAGAGCTCCCAGCGCTGCGAGTGCAAGCGCGAGGCGAAAATCGTCAACTGCGCCGAACCCAAATGGAAGTGCAATAATATATGCGGCGCTCCGTTTGCTTGTGGTCTGCACAGCTGCGACAAAGTTTGCCACGCTGGCCCCTGTGGCGGCGGAGAGTGTCCGCTGGGCGTGCGCAGCTGTCCCTGCGGCAAGAGCATCAAAACTGGCGGCTGCAGCGAGGTGGCGGAAACCTGCGGCGACACCTGCCAGAAACTCCTGTCCTGTAGCAAGCACACCTGTGCCCAGCGCTGCCATCGCGGAGCGTGCAATTTGTGTTTGGTGCGGACCAAGAAGAAATGTCGCTGTGGCCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAaccaaatgcaaacagatgcgCGATTGTGGCAAGCACGCCTGTAATCGCAAGtGCTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTCAGCTGCAACAAGCACAAGTGCCAGTCCGTGTGCCACAACGGGCCCTGTTATCCCTGCAAGCTGGAGTCGCAGATCAACTGTCGCTGCGGCAAGACGCGACGCAGCGTGCCGTGCGGACGGGAGAAGAGTGCGCGCATTGTCTGCCAGGAACTCTGTCGGATAACGGCCAAGTGCCATCATGCCATAAAGCATCGCTGCCACAAGGGCGAGTGTCCGCCGTGCTTTCAGCCGTGTGGCCTGCCCAACGACATCAGCAACTGTGGCCACATCTGCAAGGCGTCCTGCCACGCGGCCCAACGTGTGCCCAGGCCAGCGGATGCTCCACGCACGCTGCAGCGCAagTATGAGTACCGGTCGCTGCCGCATCCGCGCTGTGAGGAGGGCGTCAGCGTCAACTGCATCGGTGGCCACGAGCTGGCCGTCTGGCCCTGCTGGAACTCCAAGCCGTCGTCCTGCCAGCGCCGGTGCGCGCGCCAACTGAAGTGCGGCAATCACAAGTGCGATCTGGTCTGTCATAAGGTGCCCCAGCCCCAGGACATGCTGCAGCAGGCGGGCTGTGCCGACTGCGAGCAAGGTTGCGCCATACCGCGTCCCGCCGGCTGCACACACGCCTGTCCCAGGGCCTGCCACCCGCCGCCCTGCGCGCCCTGCGGCTTCGTCATCAAGAGCAAATGCTTTTGCGGCCTCAACCAGGTCGTCTACAAGTGCTGCGATTACTTCGACTTAAAGGGCAGCGAGCAGGAGATTGCGGAGCGCCGGCAGCAATTCAGCAGCTGTGGCAATCGTTGCCTCAAGAACTTTGATTGTGGCCATCGCTGCATGACCATCTGCCATCCCGGCCGATGTCCCAATCCGGAGCTGTGCCGCAAGAAGGTGCGCATTTATTGTGCCTGCAAGCGGCTTAAGCAGGACATCGCCTGCGACAAACATCGTGCGGGCCAAACCACATTGAGCTGCGATGACAGCTGCCAGGCCGAACGCACCAAGGCGCAGGCCacggagcagcagcaattggaGCGCAAGCGGCAGCTGGAGAAGGAACAGAATCGCCTAGAGCTGGAGAAGTTCGAGCAAAAGTTTGGCAAGCGCAAGCACAAGGAGCGCAAAGCGCTGGACATGGAACCAACCAAATCCAGCATCAACTGGCAACGTTGGGCGATCTacgcgctggcgctgctcgtCGTGCTGGGCGCCCTGGCCGTGGCCTCCTATGCGGACAGCTAA
Protein Sequence
MEKFNKVQAKNLAAAQKLVDAYASSSEDEGELDEKRILDLLYKHYQATPDNNANRTATFLENTLHSGAATCLICIGSIRRLESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQQQNGNQGHYNHLGEFVPPKRPKSLHWCCPQCRRDYQPADRPTAYECFCGKELNPAAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLARSSCLCGKAAPRSTRCIDKTWQCQQKCHALLACGKHKCNQLCHRPGQCPPCSSQSSQRCECKREAKIVNCAEPKWKCNNICGAPFACGLHSCDKVCHAGPCGGGECPLGVRSCPCGKSIKTGGCSEVAETCGDTCQKLLSCSKHTCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCQELCRITAKCHHAIKHRCHKGECPPCFQPCGLPNDISNCGHICKASCHAAQRVPRPADAPRTLQRKYEYRSLPHPRCEEGVSVNCIGGHELAVWPCWNSKPSSCQRRCARQLKCGNHKCDLVCHKVPQPQDMLQQAGCADCEQGCAIPRPAGCTHACPRACHPPPCAPCGFVIKSKCFCGLNQVVYKCCDYFDLKGSEQEIAERRQQFSSCGNRCLKNFDCGHRCMTICHPGRCPNPELCRKKVRIYCACKRLKQDIACDKHRAGQTTLSCDDSCQAERTKAQATEQQQLERKRQLEKEQNRLELEKFEQKFGKRKHKERKALDMEPTKSSINWQRWAIYALALLVVLGALAVASYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00589232;
80% Identity
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