Dfor003581.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila formosana
Gene Symbol
nfxl1
Assembly
GCA_035045625.1
Location
JAWNOW010000232.1:14062640-14066042[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 2 1.7e+04 -8.1 6.4 15 19 151 155 150 155 0.82
2 23 0.13 1.1e+03 -0.3 0.4 4 10 186 192 185 192 0.95
3 23 6.6e-08 0.00057 19.8 15.5 1 18 200 216 200 217 0.98
4 23 1 9.1e+03 -3.2 2.7 6 10 243 247 242 247 0.89
5 23 3.7e-07 0.0032 17.4 17.8 1 19 253 272 253 272 0.97
6 23 0.81 7e+03 -2.9 0.9 5 10 296 301 296 301 0.93
7 23 2.4e-07 0.0021 18.0 14.3 1 19 307 327 307 334 0.95
8 23 0.89 7.7e+03 -3.0 0.5 1 7 351 356 350 358 0.49
9 23 1.1e-08 9.7e-05 22.3 12.0 1 18 361 378 361 379 0.97
10 23 0.7 6.1e+03 -2.7 0.4 1 5 388 392 388 397 0.73
11 23 2 1.7e+04 -5.0 2.3 5 10 402 407 402 407 0.91
12 23 0.0045 39 4.4 19.2 1 18 413 430 413 431 0.97
13 23 3.4e-08 0.00029 20.7 14.7 1 19 440 458 434 458 0.90
14 23 1.2 1.1e+04 -3.4 0.7 6 10 486 490 485 490 0.87
15 23 0.00017 1.5 8.9 8.3 9 18 503 512 501 512 0.92
16 23 1.2 1.1e+04 -3.5 2.6 15 18 513 516 513 517 0.92
17 23 0.0038 33 4.6 5.5 1 11 525 534 525 535 0.95
18 23 0.87 7.5e+03 -3.0 1.4 6 10 589 593 588 593 0.88
19 23 7.3e-06 0.063 13.3 3.9 1 11 599 609 599 610 0.96
20 23 2 1.7e+04 -6.9 5.9 1 10 623 630 623 630 0.78
21 23 0.0025 22 5.2 11.9 4 18 640 654 638 655 0.94
22 23 2 1.7e+04 -5.2 2.5 4 6 660 662 659 663 0.65
23 23 8.3e-07 0.0072 16.3 10.1 1 16 710 724 710 730 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTCAATAAAGCACAGGCCAAAAATTTGGCAGCCGCACAAAAATTGGTGGACACGTACGCGTCCAGTTCCGAGGACGAGGGCGAGTTGGATGAGAAGCATATTTTGGATTTGTTGTATAAACATTACCAGAGCGTTCCCGGCAAACGCAATGAACGCAACGATGCCAATCGCACTGCAACGTTCCTGGAGAACACTTTGCACTCGGGCGCCGCCACCTGCCTGATCTGCATTGGCAGCATTCGACGCGTGGAGTCCATTTGGTCCTGCAAGAGCTGTTACTGCTTCTTCCACCTGAACTGCATTCAGCGCTGGGCCAATGACAGTCTCATGCAGCTAAAGATAAaggccgagcagcagcagaacggCGGTGGCCAGCAGGGACACTACAATCATCTGGGCGAGTTTGTGCCGCCCAAGCGCCAGAAGGCAGCGCACTGGTGCTGTCCACAGTGCCGTCGTGACTATCAGCCTGGCGACCGGCCAACGCAGTACGATTGCTTCTGCGGCAAGGAGCCGAATCCGCAGCCACAGCCGTTTCTGGTGCCGCATTCGTGCGGTGAAATCTGTGGAAAGTTGCTGCAGCCGAAATGTGGCCACGATTGCAAGCTGCTCTGTCATCCCGGGCCGTGTCCACCTTGCGCCCAACTGGCGCACAGCTCTTGTCTGTGCGGCAAGGCGCCTGCTCGTTCCGTGCGCTGTCTCGACAAGAACTGGCAGTGCCAGCAAACTTGTCAAACACTTTTGGCTTGTGGCAAGCACAAGTGCAACCAGCAGTGCCATCGACCTGGCCAATGTCCGCCGTGCACGAGCAAGAGCTCCCAGCCCTGTGATTGCAAGCAGCAAACAAAGGTTGTCAACTGCTCTGAGCCCAAATGGAAGTGCAACAAGATATGTGGCGCTCCGTTTGCCTGTGGCGTGCACAACTGCGACAAGGTGTGCCACGCAGGCCCCTGTGGAGGTGGCGAATGTCCTTTAAGCGTGCGCAGCTGTCCGTGCGGCAAGAGCCTTAAAGCGGGCAGCTGCGGCGAGGCGGCGGAGACTTGTGGGGATACCTGCCAGAAACTCTTGTCCTGCGGCTCGCACACTTGTGCGCAACGCTGTCATCGTGGCCCCTGTAATGCGTGTCTGGTGCGTACCAAGAAGAAGTGCCGTTGCGGCTTGCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCACCTGTGAAACGAAGTGCAAACAGATGCGCGATTGTGGAAAGCATGGCTGTAATCGCAAGTGTTGCGGGGATCAGTGTCCGCCGTGCGAGAAGATTTGCGGGAAGCAGTTGAGTTGCAACAAGCACAAGTGCCAGTCTGTCTGCCACAATGGGCCGTGCTATCCCTGCAAAATGGAGTCGCAGGTGAACTGTCGCTGCGGCAAGACGCGACGCAATGTGCCATGCGGCCGGGAAAAGAACGCACGCATTGCCTGCCCCGAGCTGTGTCGCATCACGGCCAAGTGCCACCATGCCATCAAGCACCGCTGCCACAAAGGCGAATGCCCGCCCTGCTGCCAGCCATGTGGACTGCCCAACGACTCGACCGGCTGTGGACACATTTGCCAGGCTCGCTGTCATGCCGCCAACCGAGTGGCCAAGCCACCAGATGCACGATCGCGTGCCCATAAGTACGAGTATCGCGCGCTGCCGCATCCACGTTGTGAGCAAGGCGTTGTCGTCACTTGCATAGGTGGCCATGAGGTGGCCACTTGGCCGTGTTGGAACTCAAAACCTTCGTCGTGTCAGCGCAAATGTGCGCGTCAATTGAAGTGTGGCAATCACAGCTGCGCCCTCGTTTGCCATGCCGTGCCCCATCCTCAGGatatgcaacagcagcagggcTGTGGCAATTGCGAACAAGGATGTGCCATTGCTCGGCCAACGGGATGTGTGCATGCTTGTGCTCGGGGCTGTCATCCAGCGCCATGTGCACCGTGCGCCTTTGTCATCAAACACAAATGCCACTGCGCCCTCAATCAGATCGTGTACAAGTGCAGCGAGTTCTACAGCGAATTGGATGCCACAGGACAACAGGAAACATTGTTGGAACAGCAGCGTGAAAAACTGCGCAGCTGTGGCAATCGTTGCATCAAGAACTTTGCTTGTGGTCATCGTTGCATGGCGATTTGCCACTCGGGCAAGTGTCCCGATCCTCAGCTCTGCCGCAAAAAGGTGCGCATTTACTGCAGCTGCAAGCGCATTAAATTGGAGGTGGCCTGTGACAAGCATCGCGCTGGCCAAACATCATTGGACTGCGATGACAACTGTCAGGCCGAACGCTCAAAAGAGCAGGCTgcggagcaacagcaactggagTTGCGTTTACGCCAGGAGGaggccaaaaataaattggagCTGGAAAAGTTCGAACAGAAGTTCGGCAAACGTAAGCCCAAGGAACGCAAAGCTGTGGATGTCGAACCCACCAAATTGCACATAGATTGGAAGCGCGTGGCTATCTATGTGGCATCTTTGCTAGTCGTTGTCGGAGCTGTAGCCGTAGCATTCTATGCGGATAGCTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDEKHILDLLYKHYQSVPGKRNERNDANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSLMQLKIKAEQQQNGGGQQGHYNHLGEFVPPKRQKAAHWCCPQCRRDYQPGDRPTQYDCFCGKEPNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKAPARSVRCLDKNWQCQQTCQTLLACGKHKCNQQCHRPGQCPPCTSKSSQPCDCKQQTKVVNCSEPKWKCNKICGAPFACGVHNCDKVCHAGPCGGGECPLSVRSCPCGKSLKAGSCGEAAETCGDTCQKLLSCGSHTCAQRCHRGPCNACLVRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKMESQVNCRCGKTRRNVPCGREKNARIACPELCRITAKCHHAIKHRCHKGECPPCCQPCGLPNDSTGCGHICQARCHAANRVAKPPDARSRAHKYEYRALPHPRCEQGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHSCALVCHAVPHPQDMQQQQGCGNCEQGCAIARPTGCVHACARGCHPAPCAPCAFVIKHKCHCALNQIVYKCSEFYSELDATGQQETLLEQQREKLRSCGNRCIKNFACGHRCMAICHSGKCPDPQLCRKKVRIYCSCKRIKLEVACDKHRAGQTSLDCDDNCQAERSKEQAAEQQQLELRLRQEEAKNKLELEKFEQKFGKRKPKERKAVDVEPTKLHIDWKRVAIYVASLLVVVGAVAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00472739;
80% Identity
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