Dlac005968.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila lacicola
Gene Symbol
nfxl1
Assembly
GCA_035045355.1
Location
JAWNPB010000133.1:3849943-3853335[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.9e+04 -8.1 6.4 15 19 145 149 144 149 0.82
2 20 0.13 1.2e+03 -0.3 0.4 4 10 180 186 179 186 0.95
3 20 6.4e-08 0.00062 19.8 15.5 1 18 194 210 194 211 0.98
4 20 1.7 1.6e+04 -3.9 2.8 6 10 237 241 236 241 0.89
5 20 9.6e-08 0.00092 19.3 17.0 1 19 247 266 247 266 0.98
6 20 1.1 1.1e+04 -3.3 0.6 5 10 290 295 290 295 0.92
7 20 7.9e-06 0.076 13.2 12.9 1 19 301 321 301 328 0.95
8 20 0.88 8.5e+03 -3.0 0.5 1 7 345 350 344 352 0.49
9 20 1.6e-07 0.0015 18.6 10.1 1 18 355 372 355 373 0.96
10 20 0.69 6.7e+03 -2.6 0.4 1 5 382 386 382 391 0.73
11 20 0.00035 3.4 7.9 17.2 1 18 407 424 407 425 0.97
12 20 2.6e-07 0.0025 17.9 17.0 1 19 434 452 428 452 0.90
13 20 1.1 1e+04 -3.3 2.0 6 10 480 484 480 484 0.98
14 20 5.4e-05 0.52 10.5 7.2 9 18 497 506 495 507 0.90
15 20 0.028 2.7e+02 1.8 5.1 1 11 519 528 519 529 0.95
16 20 0.85 8.2e+03 -2.9 1.4 6 10 579 583 578 583 0.88
17 20 2.9e-06 0.028 14.5 5.4 1 11 589 599 589 600 0.96
18 20 0.09 8.7e+02 0.2 15.1 3 18 629 644 628 645 0.93
19 20 2 1.9e+04 -6.8 3.1 10 13 652 655 651 655 0.68
20 20 1.1e-06 0.01 15.9 12.4 1 16 695 709 695 715 0.92

Sequence Information

Coding Sequence
atggaaaagtttAACAAAGCGCAGGCTAAAAACCTGGCAGCCGCACAGAAGCTTGTGAATGCATACGCCTCCAGCTCGGAGGACGAAGGCGAACTAGATGAAAAGCATATTCTtgATCTCTTATACAAGCATTACCAGGCCGCAACGGAGGGATCGAGTAAGGACAATGTAAATCGCACTGCCACATTTCTGGAGAATACGCTGCACTCGGGCGCGGCAACGTGCCTGATATGCATTGGCAGCATCCGACGCGTGGAGTCCATTTGGTCATGCAGGAGCTGCTATTGCTTCTTCCATCTCAACTGCATCCAGCGTTGGGCCAACGACAGCGTCATGCAATTGAAGGTCAaggcggagcagcagcagacgggCCACTACAATCATCTGGGCGAATATGTGCCGCCCAAGCGTCCGAAATCGCTGCACTGGTGCTGTCCCCAGTGTCGCCGGGACTATCAGCCCGGCGATCGACCCACGCAGTACGAATGCTTCTGCGGCAAGGAGCTGAatccgcagccgcagccgttTCTGGTGCCGCACTCGTGCGGCGAGATCTGTGCCAAACTGCTGCAGCCGAAATGTGGCCACGACTGCAAGCTGCTCTGCCATCCCGGTCCGTGTCCGCCGTGCGCCCAGCTCGCGCAGAGCTCCTGCCTGTGCGGCGAGTCGCCGAAGCGCAGCGTGCGCTGCAACGACAAGAACTGGCAGTGCCAGCAAAAGTGCCAATCGCTTTTGGCCTGTGGCAAGCACAAATGCAACCAGCGCTGCCATCGGCCCGGCCAGTGCCCGCcctgcagcagcaagagctCACAGTTCTGCGAATGCAAGCGCGAGCAGAAGATCGTCAACTGCGCCGAGCCCAAATGGAAGTGCAACAATATTTGTGGTGCTCCTTTTGCGTGTGGCCTGCATTTTTGCGACAAGTTGTGCCACGCTGGAGcttgcggcggcggcgagtgTCCTCTGGGCGTGCGCAGCTGTCCCTGCGGCAAGAGCACCAGAACTGGCGGCTGCAGCGAGCTGGCGGAAACCTGCGGCGACACCTGCCAGAAGCTGTTGTCCTGCGGCAAGCATAGCTGTGCGCAGCGCTGCCATCGCGGCGCTTGCAATTTGTGTTTGGTGCGCACCAAGAAGAAGTGCCGCTGCGGTCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAGCTGCGAAACCAAATGCAAGCAGATGCGCGATTGTGGCAAGCATGCCTGTAATCGCAAGtGCTGCGGCGACCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAGTCGGTCTGCCACCACGGGCCCTGTTATCCCTGCAAACTGGAATCGCAGGTGAACTGTCGCTGCGGCAAGACGCGTCGCAGCGTGCCCTGCGGCCGGGAGAAGAGCGCGCGCATTCTCTGCCAGGAGCTCTGCCGCATCGCGTCCAAGTGTCATCATGCCATCAAGCATCGCTGCCACAAGGGCGAGTGTCCGCCCTGCGCGCAGCCATGCGGCTTGCCCAATGACACCAGCGGCTGCGGACACATCTGCAGGGCGCGCTGCCACGCAGCGCTGCGTGTGTCCAAGCCGGCGCAGCAGCACAAGTATGAATACCGTGCGCTGGCGCATCCGCGCTGCGAGGAGCGCGTCCGCGTTGGCTGCATTGGCGGCCACGAGCTGGCCACTTGGCCCTGCTGGAACTCCAAGCCGACGTCCTGCCAGCGCAAATGTGCGCGTCAATTGAGATGCGGCAATCATCGTTGCCAATTGATCTGCCATGCAGTGCCCCAGCCGCAGGACATGCATCAGCAGCCGGGCTGTGCCAATTGCGAGGAAGGCTGCGTTATACCGCGACCCGCGGGCTGCACGCATGCCTGCACCAAAGGCTGCCATGTGCCGCCCTGTGCTCCGTGCGGCTTTGTCATCAGAGTCAAATGCCACTGCGGCCTCAACCAGGTCATGTACAAGTGCAGCGAGTACTTCAAccaggaggagcaggagcaggcgcTGGAGCGCCGGCAAAAGTTGGGCAGCTGTGGCAATCGCTGCCTCAAAAACTTCGATTGCGGCCATCGCTGCCTAACCGTCTGCCATCCCGGGCCGTGTCCCAATCCGGAGCTGTGCCGCAAGAAGGTGCGCATCTATTGCGCCTGCAAGCGGCTCAAGTTGGAGTTAGCTTGCGACAAGCAACGCGCGGGCCAAACTGAACTAAAGTGCGATGCAAATTGCCTGGCCGAGCTGTCCAAGGCGCAGGCTAcggaacagcagctgctggaacGTAAACTAAAGCAGGAACAGGAAAAGAATCGTCTAGAGCTGGAAAAGTACGAGCAAAAGTTCGCCAAGCGCGCAAAGCACAAAGAGCGCAAACATTTGGATAAGCAGCCAAACAGTTGCCAAATCGATTGGCAACGTTGCGGCATCTATGCCTTCGCTCTGCTGGCCGTAATGGGCGCACTGGGCGTGGCATACTATGCGGATAGCTGA
Protein Sequence
MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYQAATEGSSKDNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCRSCYCFFHLNCIQRWANDSVMQLKVKAEQQQTGHYNHLGEYVPPKRPKSLHWCCPQCRRDYQPGDRPTQYECFCGKELNPQPQPFLVPHSCGEICAKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGESPKRSVRCNDKNWQCQQKCQSLLACGKHKCNQRCHRPGQCPPCSSKSSQFCECKREQKIVNCAEPKWKCNNICGAPFACGLHFCDKLCHAGACGGGECPLGVRSCPCGKSTRTGGCSELAETCGDTCQKLLSCGKHSCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFSCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHHGPCYPCKLESQVNCRCGKTRRSVPCGREKSARILCQELCRIASKCHHAIKHRCHKGECPPCAQPCGLPNDTSGCGHICRARCHAALRVSKPAQQHKYEYRALAHPRCEERVRVGCIGGHELATWPCWNSKPTSCQRKCARQLRCGNHRCQLICHAVPQPQDMHQQPGCANCEEGCVIPRPAGCTHACTKGCHVPPCAPCGFVIRVKCHCGLNQVMYKCSEYFNQEEQEQALERRQKLGSCGNRCLKNFDCGHRCLTVCHPGPCPNPELCRKKVRIYCACKRLKLELACDKQRAGQTELKCDANCLAELSKAQATEQQLLERKLKQEQEKNRLELEKYEQKFAKRAKHKERKHLDKQPNSCQIDWQRCGIYAFALLAVMGALGVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00491196;
80% Identity
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