Dmea009677.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila melanica
Gene Symbol
nfxl1
Assembly
GCA_004143765.1
Location
SCDT01001832.1:12053-15893[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 2e+04 -8.1 6.4 15 19 145 149 144 149 0.82
2 19 0.13 1.3e+03 -0.3 0.4 4 10 180 186 179 186 0.95
3 19 6.5e-08 0.00066 19.8 15.5 1 18 194 210 194 211 0.98
4 19 1.7 1.7e+04 -3.9 2.8 6 10 237 241 236 241 0.89
5 19 9.9e-09 0.0001 22.4 16.1 1 19 247 266 247 266 0.98
6 19 0.92 9.3e+03 -3.0 0.6 5 10 290 295 290 295 0.92
7 19 7.4e-07 0.0075 16.4 12.2 1 19 301 321 301 329 0.90
8 19 0.88 9e+03 -3.0 0.5 1 7 345 350 344 352 0.49
9 19 2.3e-07 0.0024 18.0 10.9 1 18 355 372 355 373 0.96
10 19 0.7 7.1e+03 -2.6 0.4 1 5 382 386 382 391 0.73
11 19 0.00036 3.6 7.9 17.2 1 18 407 424 407 425 0.97
12 19 3.3e-08 0.00034 20.7 14.7 1 19 434 452 428 452 0.90
13 19 1.1 1.1e+04 -3.3 2.0 6 10 480 484 480 484 0.98
14 19 3.4e-05 0.34 11.1 6.2 9 18 497 506 495 507 0.92
15 19 0.0017 17 5.7 5.3 1 11 519 528 519 529 0.95
16 19 1.7 1.7e+04 -3.9 1.1 6 10 584 588 583 588 0.85
17 19 3.2e-06 0.032 14.4 4.5 1 11 594 604 594 605 0.96
18 19 0.018 1.8e+02 2.4 16.5 3 18 634 649 633 650 0.93
19 19 2.8e-06 0.028 14.6 10.9 1 16 701 715 701 721 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTTAACCAAGTGCAGGCCAAAAACTTGGCAGCCGCACAGAAGCTGGTGGATGCCTACGCCTCCAGTTCAGAGGATGAAGGCGAACTGGATGAACAGCACATACTtgAACTTCTCTACAAGCATTATCAGGCTCCCGCGAAAGGAGGTGACAACAATGCAAATCGCACAGCCACTTTTCTGGAGAACACCCTTCACTCTGGCGCGGCAACGTGCCTGATCTGCATTGGCAGCATACGGCGTGTGGAGTCCATTTGGTCCTGCAAGAGCTGCTATTGCTTCTTCCATCTGAACTGCATCCAGCGCTGGGCCAACGATAGCGTTATGCAAATGAAGGTCAAGGCGGAGCAGAACAGCAATCAGGGCCACTACAATCATCTGGGCGAGTTTGTGCCGCCCAAGCGTCCGAAATCGCTGCACTGGTGCTGTCCACAGTGTCGCAGGGACTATCAACCTGCCGATCGGCCCACGGCGTACGAGTGCTTCTGCGGCAAGGAGGTGAATCCGGCAGCGCAGCCATTTCTTGTGCCGCACTCGTGCGGCGAAATCTGCGGCAAGCTGCTGCAACCCAAATGCGGCCACGACTGCAAGCTACTCTGCCATCCGGGCCCCTGTCCGCCGTGCGCACAGCTCGCGCAAAGCTCCTGCCTCTGCGGCAAGTCGGCGCCGCGCTCAACACGCTGCATCGACAAGAACTGGCAGTGCCAGCAGAAGTGCCAAGCGTTGCTAGCGTGTGGCAAGCACAAATGCAACCAGCTCTGCCATCGTCCTGGCCAGTGCCCGCCCTGCAGTAGCAAGAGCGCACAGCCCTGCGAATGCAAGCGCGAGACGAAAGTCGTCAACTGTGCCGAGCCCAAGTGGAAGTGCGCCAATgtgtGTGGTGCTCTGTTTGCTTGTGGACTGCACAGCTGTGATAAAGTTTGCCACGCTGGCTCCTGTGGCGGCGGAGACTGTCCGCTGGGCGTGCGTAGCTGTCCCTGCGGCAAGAGCATCAAATCTGGCGGTTGCAGCGAGGTGGCGGAAACATGCGGCGACACCTGCCAGAAGCTCTTGCCCTGTGGCAAGCATAGCTGCACGCAACGCTGTCATCGCGGGGCCTGCAATTTGTGTTTGGTGCGCACCAAGAAGAAATGTCGCTGTGGCTTGCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGaaaccaaatgcaaacagatGCGCGATTGTGGCAAGCATGCCTGCAATCGCAAGTGCTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTCAGCTGCAACAAGCACAAGTGCCAGTCCGTGTGCCACAACGGACCGTGTTATCCGTGCAAGCTGGAGTCGCAGATCAACTGCCGCTGCGGCAAGACGCGACGTAGCGTGCCCTGCGGACGGGAGAAGAGTGCGCGCATTGTCTGCCAGGAGCTCTGTCGGATTACGGCCAAGTGTCATCATGCCATAAAGCACCGCTGCCACAAGGGCGAGTGTCCGCCGTGCTTTCAGCCGTGTGGCCTGCCCAACGATACCAGTAACTGTGGCCACATCTGCAAGGCACCCTGCCATGCGGCCCAACGGGTGTCCAGGCCAGCGGATGGGCCACGCACGCTCCAGCGCAAGtaTGAGTACCGCAAGCTGCCGCATCCGCGCTGCGATGTGGGCGTCAGCGTCAACTGCATCGGTGGTCATGAGTTGGCCGTTTGGCCTTGCTGGAACTCCAAGCCCTCATCCTGCCAGCGCAGGTGTGCGCGACAACTGAAGTGCGGCAATCACAAGTGCGCACTCGTCTGTCATGCGGTGCCGAAGCCGCAGGATATGCTGCAGCAGGCCGGCTGTGCGGACTGCGAGGAGGGCTGCGCCATACCGCGTCCCGCTGGCTGCACACACGCCTGTCCCAAGGCCTGCCATCCGCCGCCCTGCGCCCCCTGCGGCTTTGTCATCAAGAGCAAATGCTTCTGCGGCCTCAACCAGGTCGTTTACCAGTGCTGCGATTACTTCGACATAAAGGGCAGCGAGCAGGAGATCGCGGAGCGCCGACAACAGTTCAACAGCTGTGGCAATCGGTGCCTCAAGAATTTCGACTGTGGCCACCGCTGCATGACCATCTGCCATCCTGGCAGGTGTCCCAATCCGGAGCTGTGCCGCAAAAAGGTGCGCATTTATTGCGCCTGCAAGCGGCTCAAGCAGGACATAGCCTGCGACAAGCACCGTGCGGGTCAAACCACGTTGAGCTGCGATGACAGCTGCCAGGCCGAACGCACCAGGGCGCAGGCTAcggaacagcagcaattggagcgcaagctgcagctggagcaggaACAGAATCGACTGGAGCTGGAGAAGTTCGAGCAAAAGTTCGGCAAGCGCAGGCACAAGGAGCGCAAAACGCTCGACGTGGAACCAACCAAATCCAACATAAACTGGCAGCGTGTGGCCATCTATGCGATGGCCCTGCTCGCCGTGCTGGGCGCCGTCGTCGTAGCCTTTTATGCGGACAGCTAA
Protein Sequence
MEKFNQVQAKNLAAAQKLVDAYASSSEDEGELDEQHILELLYKHYQAPAKGGDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQNSNQGHYNHLGEFVPPKRPKSLHWCCPQCRRDYQPADRPTAYECFCGKEVNPAAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSAPRSTRCIDKNWQCQQKCQALLACGKHKCNQLCHRPGQCPPCSSKSAQPCECKRETKVVNCAEPKWKCANVCGALFACGLHSCDKVCHAGSCGGGDCPLGVRSCPCGKSIKSGGCSEVAETCGDTCQKLLPCGKHSCTQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCQELCRITAKCHHAIKHRCHKGECPPCFQPCGLPNDTSNCGHICKAPCHAAQRVSRPADGPRTLQRKYEYRKLPHPRCDVGVSVNCIGGHELAVWPCWNSKPSSCQRRCARQLKCGNHKCALVCHAVPKPQDMLQQAGCADCEEGCAIPRPAGCTHACPKACHPPPCAPCGFVIKSKCFCGLNQVVYQCCDYFDIKGSEQEIAERRQQFNSCGNRCLKNFDCGHRCMTICHPGRCPNPELCRKKVRIYCACKRLKQDIACDKHRAGQTTLSCDDSCQAERTRAQATEQQQLERKLQLEQEQNRLELEKFEQKFGKRRHKERKTLDVEPTKSNINWQRVAIYAMALLAVLGAVVVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00589232;
80% Identity
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