Dsub005506.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila suboccidentalis
Gene Symbol
nfxl1
Assembly
GCA_037043435.1
Location
JBAMBK010000757.1:59457-64158[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3 2.1e+04 -8.1 6.4 15 19 154 158 153 158 0.82
2 20 0.19 1.4e+03 -0.3 0.4 4 10 189 195 188 195 0.95
3 20 9.8e-08 0.0007 19.8 15.5 1 18 203 219 203 220 0.98
4 20 1.6 1.1e+04 -3.2 2.7 6 10 246 250 245 250 0.89
5 20 1.9e-07 0.0014 18.9 17.2 1 19 256 275 256 275 0.97
6 20 1.4 1e+04 -3.1 0.9 5 10 299 304 299 304 0.93
7 20 2.5e-07 0.0018 18.5 15.3 1 19 310 330 310 337 0.95
8 20 1.3 9.5e+03 -3.0 0.5 1 7 354 359 353 361 0.49
9 20 3.3e-08 0.00024 21.3 12.0 1 18 364 381 364 382 0.96
10 20 1.1 7.5e+03 -2.7 0.4 1 5 391 395 391 400 0.73
11 20 3 2.1e+04 -5.0 2.3 5 10 405 410 405 410 0.91
12 20 0.0067 48 4.4 19.2 1 18 416 433 416 434 0.97
13 20 5.1e-08 0.00036 20.7 14.7 1 19 443 461 437 461 0.90
14 20 0.00024 1.7 9.0 8.6 9 18 506 515 504 516 0.91
15 20 0.016 1.2e+02 3.1 5.6 1 11 528 537 528 538 0.95
16 20 1.3 9.3e+03 -3.0 1.4 6 10 593 597 592 597 0.88
17 20 1.2e-05 0.083 13.2 4.5 1 11 603 613 603 614 0.96
18 20 3 2.1e+04 -8.9 6.9 1 10 627 634 627 634 0.72
19 20 0.012 83 3.6 14.1 4 18 644 658 642 659 0.93
20 20 7.4e-06 0.052 13.8 10.5 1 16 710 724 710 730 0.92

Sequence Information

Coding Sequence
atggaaaaattcaACAAGGCGCAGGCAAAGAATTTAGCAGCAGCTCAAAAACTGGTGGATGCATACGCCTCCAGTTCCGAAGATGAGGGCGAGCTGGATGAAAAGCATATACTGGATTTGTTATACAAGCATTACCAAGGCAGCTCGGATGCAGGATCGAATGCTAGTAaacttaacaacaacaatgccaatcGCACAGCAACGTTCCTGGAGAACACGCTGCACTCGGGAGCGGCAACGTGCTTGATTTGCATTGGCAGCATTCGTCGGTTGGAGTCCATTTGGAGCTGCAGGAGCTGTTACTGCTTCTTCCATCTGAACTGCATTCAGCGCTGGGCCAACGACAGTGTGATGCAAATGAAGGTGAAAgcggagcagcagcagaatgGCAATCAGGGACATTACAATCATCTGGGCGAGTTTGTGCCGCCCAAGCGTCAAAAGTCGCTGCATTGGTGTTGTCCACAGTGTCGCCGGGACTATCAGCCGACTGAGCGACCCACACAGTATGATTGCTTCTGCGGCAAGGAGATGAATCCGCAGCCACAGCCCTTTTTGGTGCCGCACTCCTGTGGCGAAATCTGCGGCAAGTTGTTGCAGCCGAAATGTGGCCACGACTGCAAGCTGCTGTGTCATCCGGGTCCGTGTCCACCCTGTGCTCAACTGGCGCACAGTTCCTGTCTCTGTGGCAAGTCGGCGCCACGTTCCGTGCGCTGCATCGACAAGACTTGGCAGTGCCAACAAACTTGTCAAGCGCTTTTAGCCTGTGGCAAGCACAAGTGCAACCAAAGATGCCACAGACCTGGACAGTGTCCGCCCTGCACCAACAAGAGTTCCCAGCACTGCGATTGCAGGCGGGAACTCAAGGTTGTCAACTGCTCCGAGCCCAAATGGAAGTGCAGCAAAATATGCGGCGCTTCCTTTGCCTGTGGACTGCACAGCTGTGAGAAGGTGTGTCATGCGGGTCCCTGCGGAGGCGGCGAATGTCCTTTGGGTCTGCGCAGCTGTCCCTGTGGCAAGAGCAGCAAAGCGGGCATCTGCAGCGAGGTGGTGGAAACTTGTGGCGACACTTGCCAGAAGCTGTTGTCCTGTGGCAAGCACACGTGTGCGCAGCGCTGTCATCGAGGACCTTGCAACCTGTGCCTGGTGCGCACCAAGAAAAAGTGTCGTTGTGGGCTGCATGAGAAGGAGCTGCCCTGCTCCAAGGATTTCACCTGCGAGACAAAGTGCAAGCAGATGCGCGATTGTGGCAAGCATGGCTGCAATCGCAAGTGTTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGTGGAAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAATCCGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTGGAGTCCCAGGTGAACTGTCGCTGCGGCAAGACGCGACGCAGCGTGCCCTGTGGCAGGGAAAAGAGCGCGAGGATTGCCTGCCTGGAGTTGTGCAGAATCTCCGCCAAGTGTCATCACGCCATAAAGCATCGCTGTCACAAGGGAGAATGCCCGCCGTGTGGACAGCCATGTGGTTTGCCCAATGACACCAACAATTGTGGCCACATTTGCAAGGCGCGTTGTCACGCAGCCATCAGAGTCAACAAGCCAGCGGATGCAGTGCGTCCACATGCCAATAAGTATGAGTATCGTGCTCTGGCGCATCCACGTTGTGAGGAGGGCGTCAGTGTCACCTGCATTGGTGGCCACGAGCTGGCCACTTGGCCCTGCTGGAACTCCAAGCCGTCGTCCTGCCAGCGCAAATGTGCCAGAAAGTTGAAATGTGGCAATCACAGCTGCTCCTTGGTCTGCCATGCTGTGCCCAATCCCCAGGATATGCAGCAACAAGTTGGCTGTGGCCATTGTGAGCAAGGCTGTGACATTCCCAGACCACCAGGCTGTGTGCACGCCTGTCCCAGGGGATGTCATCCAGCTCCATGTGCGCCATGTAATTTTGTAATCAAGAGCAAGTGCCATTGTGCCCTCAATCAGATCGTATACAAATGCAGCGAGTTCTACAACAAAGTCGGAACGGAGCAGGAGATTCTGGAGCATCGGGAGAAGCTGCAGAGCTGTGGCAATCGTTGCCTGAAGAATtttGCCTGTGGCCATCGCTGCCTGACCATTTGTCACTCCGGCAAGTGTCCCAATCCCGAGCTGTGTCGCAAGAAGCTGCGCATTTACTGTGCCTGCAAGCGGATTAAGCTGGAAATAGCCTGCGACAAGCATCGCGCAGGTCAAACATCTTTGGACTGCGATGCCAACTGTCAGGCGGAACGTTCCAAGGCGCAGGCgacggagcagcagcagctggagcaaAGACTGCGACAGGAGGAGGCCAAGAATCGACTGGAGTTGGAGAAATTCGAACAGAAGTTTGGCAAGCGAAAGCCCAAGGAACGCAAAGCTGTGGATGTGGAGAAGACCAAAACAGACATTGATTGGAAGCGTCTAGCCATCTATATAGTATCATTCCTGGCGGTGATGGGCGCTCTGGGCGTGGCATACTATGCAGACAGCTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQGSSDAGSNASKLNNNNANRTATFLENTLHSGAATCLICIGSIRRLESIWSCRSCYCFFHLNCIQRWANDSVMQMKVKAEQQQNGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPTERPTQYDCFCGKEMNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSAPRSVRCIDKTWQCQQTCQALLACGKHKCNQRCHRPGQCPPCTNKSSQHCDCRRELKVVNCSEPKWKCSKICGASFACGLHSCEKVCHAGPCGGGECPLGLRSCPCGKSSKAGICSEVVETCGDTCQKLLSCGKHTCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKDFTCETKCKQMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIACLELCRISAKCHHAIKHRCHKGECPPCGQPCGLPNDTNNCGHICKARCHAAIRVNKPADAVRPHANKYEYRALAHPRCEEGVSVTCIGGHELATWPCWNSKPSSCQRKCARKLKCGNHSCSLVCHAVPNPQDMQQQVGCGHCEQGCDIPRPPGCVHACPRGCHPAPCAPCNFVIKSKCHCALNQIVYKCSEFYNKVGTEQEILEHREKLQSCGNRCLKNFACGHRCLTICHSGKCPNPELCRKKLRIYCACKRIKLEIACDKHRAGQTSLDCDANCQAERSKAQATEQQQLEQRLRQEEAKNRLELEKFEQKFGKRKPKERKAVDVEKTKTDIDWKRLAIYIVSFLAVMGALGVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00510951;
80% Identity
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