Dmon012823.1
Basic Information
- Insect
- Drosophila montana
- Gene Symbol
- nfxl1
- Assembly
- GCA_003086615.1
- Location
- LUVX01035692.1:20628-24045[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.9e+04 -8.0 6.4 15 19 148 152 147 152 0.82 2 20 0.12 1.1e+03 -0.2 0.4 4 10 183 189 182 189 0.95 3 20 6.1e-08 0.00056 19.9 15.5 1 18 197 213 197 214 0.98 4 20 1.4 1.3e+04 -3.6 2.6 6 10 240 244 239 244 0.89 5 20 9e-08 0.00084 19.4 17.0 1 19 250 269 250 269 0.98 6 20 1 9.6e+03 -3.2 0.6 5 10 293 298 293 298 0.92 7 20 6.2e-08 0.00057 19.9 7.9 1 19 304 324 304 331 0.93 8 20 0.83 7.7e+03 -2.9 0.5 1 7 348 353 347 355 0.49 9 20 1.5e-07 0.0014 18.7 10.1 1 18 358 375 358 376 0.96 10 20 0.29 2.6e+03 -1.4 0.4 1 5 385 389 385 394 0.75 11 20 0.00033 3.1 8.0 17.2 1 18 410 427 410 428 0.97 12 20 3.1e-08 0.00029 20.8 14.7 1 19 437 455 431 455 0.90 13 20 1 9.5e+03 -3.2 2.0 6 10 483 487 483 487 0.98 14 20 4.9e-05 0.45 10.6 7.1 9 18 500 509 498 510 0.90 15 20 0.01 93 3.2 5.6 1 11 522 531 522 532 0.95 16 20 0.81 7.5e+03 -2.9 1.4 6 10 582 586 581 586 0.88 17 20 1.4e-06 0.013 15.6 5.5 1 11 592 602 592 603 0.96 18 20 0.074 6.8e+02 0.5 15.2 3 18 632 647 631 648 0.93 19 20 1.6 1.5e+04 -3.8 1.4 8 13 653 658 652 658 0.73 20 20 1.6e-06 0.015 15.4 14.5 1 16 700 714 700 725 0.88
Sequence Information
- Coding Sequence
- atggaaaagtttaACAAAGCGCAGGCTAAAAACCTGGCAGCCGCACAGAAGCTTGTGAATGCATACGCCTCTAGCTCGGAGGACGAAGGCGAACTAGATGAAAAGCATATTCTTGATCTCTTATACAAGCATTACCAGGCCGCAACGGAGGGATCGAGGAAGGACAATGTGAATCGCACTGCAACATTCCTCGAGAATACGCTGCACTCGGGCGCGGCAACGTGCTTGATATGCATTGGCAGCATACGACGCGTGGAGTCCATTTGGTCATGCAGGAGCTGCTATTGCTTCTTCCATCTGAATTGCATTCAGCGTTGGGCCAACGACAGCGTCATGCAATTGAAGGTCAaggcggagcagcagcagcagcagcagacgggCCACTACAATCATCTGGGCGAGTATGTGCCGCCCAAGCGTCCGAAATCGCTGCACTGGTGCTGTCCCCAGTGTCGCCGGGACTATCAGCCCGGCGATCGACCCACCCAGTATGAATGCTTCTGCGGCAAGGAGCTGAATCCGCAGCCACAGCCGTTTCTGGTGCCGCACTCCTGCGGCGAGATCTGTGCCAAACTGCTGCAGCCGAAATGTGGCCACGACTGCAAGCTGCTCTGCCATCCCGGTCCGTGTCCGCCGTGTGCCCAGCTCGCGCAGAGCTCCTGCTTGTGCGGCAAGTCGCCGAAGCGTAGCGTGCGCTGCATCGACAAGAACTGGGAGTGTCAGCAAAAGTGCCAATCGCTTTTGGCCTGTGGCAAGCACAAATGCAACCAACGCTGCCATCGGCCCGGCCAGTGCCCGCcctgcagcagcaagagctCACAGTTCTGCGAATGCAAACGCGAGGAGAAGATCGTCAACTGTGCCGAGCCCAAATGGAAGTGCAACAATATTTGTGGCGCTCCTTTTGCGTGTGGCCTGCATTTTTGCGACAAGGTGTGCCACGCTGGACCTTGTGCCGGCGGAGAGTGTCCTCTGGGCGTGCGCAGCTGTCCCTGCGGCAAGAGCACCAGAACTGGCGGCTGCAGCGAGGTGGCGGAAACCTGCGGCGACACCTGCCAGAAGCTGTTGTCCTGCGGCAAGCACAGCTGTGCGCAGCGCTGCCATCGCGGCGCTTGCAATTTGTGCCTGGTGCGCACCAAGAAGAAGTGCCGCTGCGGTATGCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAATTGCGAAACCAAGTGCAAGCAGATGCGCGATTGTGGCAAGCATGCCTGTAATCGCAAGtgCTGCGGCGACCAGTGTCCGCCCTGCGAGAAGATTTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAGTCGGTGTGCCACAACGGGCCCTGTTATCCCTGCAAACTGGAATCGCAGGTGAACTGTCGCTGCGGCAAGACGCGTCGCAGCGTGCCCTGCGGCCGGGAGAGGAGCGCTCGCATTGTCTGCCAGGAGCTGTGCCGCATCACGTCCAAGTGTCATCATGCTATAAAGCATCGCTGCCACAAGGGAGAGTGTCCGCCCTGCGTGCAGCCATGTGGCTTGCCCAATGACACCAGCGGCTGTGGCCACATATGCAAGGCGCGCTGCCACGCAGCACTGCGTGTGCCCAAGCCGGCGCAGCAGCACAAGTATGAATACCGTGCGCTGCCGCATCCGCGCTGCGAGGAGGGCGTCCGCGTTGGCTGCATTGGCGGCCACGAGCTGGCCACTTGGCCCTGCTGGAACTCGAAGCCGACGTCCTGCCAGCGCAAATGTGCGCGTCTATTGAAATGCGGCAATCATCGATGCCAATTGGTCTGCCATGCAGTGCCCCAGCCGCAGGACATGCTCCAGCAGCCGGGCTGTGCCAATTGCGAGGAAGGCTGCGCCATACCACGACCGCCGGGCTGCACGCATGCGTGCACCAAAGGCTGCCATGCGCCGCCCTGTGCACCGTGCGGCTTTGCCATCAAAGCCAAATGCCACTGCGGCCTCAACCAGGTCATGTACAAGTGCAGCGAGTACTTCAACGAGGAGGAGGGCAGTGTGCAGCAGGCGCTGGAGCGCCGGCAAAAGTTTGGCAGCTGTGGCAATCGCTGCCTCAAAAACTTCGATTGCGGCCATCGCTGCATAACCGTCTGCCATCCCGGCCCGTGTCCCAATCCGGAGCTGTGCCGGAAGAAGAGCTGTCCAAGGCGAAGGCTACGGAACANNGAAAAGAATCGTCTTGAGCTGGAAAAATACGAGCAAAAGTTCGCCAAGCGCAAGCACAAAGAGCGCAAAGCTTTGGATGTGCAGCCAACCAGTTACCAAATCGATTGGCAACGTTGGGGCATCTATGCCTTGGCCCTGCTGGCCGTAATGGGCGCACTGGGCGTGGCATACTATGCGGATAGCTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYQAATEGSRKDNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCRSCYCFFHLNCIQRWANDSVMQLKVKAEQQQQQQTGHYNHLGEYVPPKRPKSLHWCCPQCRRDYQPGDRPTQYECFCGKELNPQPQPFLVPHSCGEICAKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSPKRSVRCIDKNWECQQKCQSLLACGKHKCNQRCHRPGQCPPCSSKSSQFCECKREEKIVNCAEPKWKCNNICGAPFACGLHFCDKVCHAGPCAGGECPLGVRSCPCGKSTRTGGCSEVAETCGDTCQKLLSCGKHSCAQRCHRGACNLCLVRTKKKCRCGMHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGRERSARIVCQELCRITSKCHHAIKHRCHKGECPPCVQPCGLPNDTSGCGHICKARCHAALRVPKPAQQHKYEYRALPHPRCEEGVRVGCIGGHELATWPCWNSKPTSCQRKCARLLKCGNHRCQLVCHAVPQPQDMLQQPGCANCEEGCAIPRPPGCTHACTKGCHAPPCAPCGFAIKAKCHCGLNQVMYKCSEYFNEEEGSVQQALERRQKFGSCGNRCLKNFDCGHRCITVCHPGPCPNPELCRKKSCPRRRLRNXEKNRLELEKYEQKFAKRKHKERKALDVQPTSYQIDWQRWGIYALALLAVMGALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- iTF_00491196;
- 80% Identity
- -