Dneo010334.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila neotestacea
Gene Symbol
nfxl1
Assembly
GCA_035044365.1
Location
JAWNMD010000273.1:9809-12990[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 2e+04 -8.1 6.4 15 19 152 156 151 156 0.82
2 21 0.13 1.3e+03 -0.3 0.4 4 10 187 193 186 193 0.95
3 21 6.5e-08 0.00067 19.8 15.5 1 18 201 217 201 218 0.98
4 21 1 1.1e+04 -3.2 2.7 6 10 244 248 243 248 0.89
5 21 1.8e-07 0.0019 18.4 15.6 1 19 254 273 254 273 0.97
6 21 0.49 5e+03 -2.1 1.2 5 10 297 302 297 302 0.94
7 21 3.7e-07 0.0038 17.4 15.0 1 19 308 328 308 335 0.95
8 21 0.89 9.1e+03 -3.0 0.5 1 7 352 357 351 359 0.49
9 21 3.4e-08 0.00034 20.7 10.3 1 18 362 379 362 380 0.96
10 21 0.7 7.2e+03 -2.7 0.4 1 5 389 393 389 398 0.73
11 21 2 2e+04 -5.0 2.3 5 10 403 408 403 408 0.91
12 21 0.0045 46 4.4 19.2 1 18 414 431 414 432 0.97
13 21 3.4e-08 0.00034 20.7 14.7 1 19 441 459 435 459 0.90
14 21 0.37 3.8e+03 -1.8 1.1 6 10 487 491 486 491 0.92
15 21 0.00016 1.6 9.0 8.6 9 18 504 513 502 514 0.91
16 21 0.00073 7.5 6.9 7.2 1 11 526 535 526 536 0.95
17 21 0.87 8.8e+03 -2.9 1.4 6 10 592 596 591 596 0.88
18 21 7.6e-06 0.078 13.2 4.6 1 11 602 612 602 613 0.96
19 21 2 2e+04 -7.0 6.9 1 10 626 633 626 633 0.88
20 21 0.023 2.3e+02 2.1 14.0 4 18 643 657 641 658 0.94
21 21 7.8e-07 0.008 16.4 10.2 1 16 709 723 709 729 0.92

Sequence Information

Coding Sequence
atggaaaaatttaACAAGGCGCAAGCAAAGAATTTAGCCGCAGCACAGAAACTGGTGGATGCGTATGCTTCCAGTTCGGAAGATGAAGGCGAATTGGATGAAAAGCATATTCTCGaTTTGTTATACAAGCATTATCAAAGCACCTCAGATGGATCAAATGCCATTAAACGCAATGACAATAATGCAAATCGCACAGCTACTTTTCTGGAAAACACACTGCACTCGGGAGCGGCAACTTGTTTGATTTGCATTGGGAGCATACGACGTGTTGAGTCGATATGGTCTTGCAAGAGTTGTTATTGCTTCTTCCATCTAAACTGCATTCAGCGTTGGGCCAATGATAGTGTTATGCAAATGAAAGTGAAGGCGGAACAGCAAAATGGTAACCAGGGGCATTACAATCATCTGGGAGAGTTTGTGCCGCCCAAGCGACAAAAATCATTGCATTGGTGTTGTCCACAGTGTCGCCGAGATTATCAGCCGGCAGACCGACCCACACAGTATGATTGCTTCTGTGGTAAGGAGATAAATCCACAGCCACAGCCCTTCTTGGTGCCACACTCCTGTGGCGAAATCTGTGGCAAGTTGTTGCAGCCCAAATGTGGGCACGATTGCAAGTTACTCTGCCATCCTGGACCGTGTCCACCATGCGCTCAATTAGCAAACAAATCTTGTCTTTGTGAAAAATCAGCTAAACGATCTGTGCGTTGCCTCGACAAGAACTGGCAATGCCAGCAAACTTGTCAAGCTCTGTTATCGTGTGGCAAGCACAAGTGTAACCAAAGATGCCATCGACCTGGTCTGTGTCCTCCGTGTACTAACAAGAGCCAACAGCCTTGCGATTGCAAGCAGGAGGTCAAGATTGTCAACTGCTCAGAACCAAAATGGAAGTGCAACAAAGTATGTGGTGCTCCTTTTGCTTGTGGACTGCACAACTGCGACAAGGTGTGTCATGCTGGTCCTTGTGGAGGCGGAGAATGTCCCTTGGGCCTACGAAGCTGTCCCTGCGGCAAGAGTaacAAAACAGGAAACTGCAGCGAGGTGGCGGAAACCTGTGGCGACACCTGCCAGAAACTGTTGTCCTGTGGCAAGCATACGTGTGCCCAACGCTGTCATCGTGGAGCTTGCAACTTGTGTCTGGTACGTACAAAGAAAAAGTGTCGCTGTGGATTGCATGAGAAGGAGCTACCCTGCTCCAAGGACTTTACCTGTGAAACAAAGTGCAAGCTGATGCGCGATTGTGGCAAGCATGGTTGCAATCGCAAGTGTTGTGGTGACCAGTGTCCACCCTGCGAGAAGATTTGCGGCAAGCAGCTTAGCTGCAACAAGCACAAGTGTCAATCCGTGTGTCACAATGGCCCCTGTTATCCTTGCAAACTGGAGTCCCAGGTGAACTGTCGCTGTGGCAAGACGCGACGCAACGTACCCTGCGGACGGGAGAAAAGTGCACGAATTGCCTGTCAGGAATTATGCAGAATCTCGGCCAAGTGTCATCATGCCATCAAACATCGCTGTCACAAAGGCGAATGCCCACCTTGTGGTCAGCCATGTGGCTTGCCCAATGACACCAGCGGTTGTGGACACACTTGCAAGGCACGCTGTCATGCTGCCATAAGGGCAACCAAGCCAACGGATGCTGCAGCACGGCAGCGAGTCAATAAATATGATTATCGTGCTTTGCCACATCCACGATGTGAGGAGGGTGTCACTGTCACCTGCATTGGTGGTCATGAGGTGGCCACTTGGCCCTGCTGGAACTCCAAACCGTCGTCCTGCCAGCGTAAATGTGCAAGGAAGTTGAAATGTGGCAGTCACACTTGCAGCTTAGTCTGTCATGCTGTTCCCAATCTGCAGGACATGCAACAGCAGGTTGGCTGTGGAAAATGCGAGCAAGGTTGCGACGTTCCAAGACCTCCAGGTTGTGTGCATGCCTGTGCCAAAGGCTGTCATCCACCTCCATGTGCGCCCTGTGCTTTTGTCATTAAAAGCAAATGTCATTGTGCTCTCAATCAGATTGTTTACAAGTGCAGCGAGTTCTACAATGGAGTTGGTACTGAACAGGAGATTCTGGACCATCGGGAGAAGCTAAGAAGCTGTGGCAATCGTTGTCtgaaaaatTTTGCCTGTGGACATCGCTGCCTGGCCATTTGCCACTCCGGTCAGTGTCCCAATCCCGAATTGTGCCGCAAAAAGGTGCGGATTTATTGTGCCTGCAAGAGAATCAAGCTGGAAGTGTCCTGTGACAAACATCGTGCAGGTCAAACATCTTTAGACTGCGATGCCAATTGTCAAGCTGAACGTTCTAAGGCAAAGGCTacagaacagcagcaactggagCAAAGATTGCGACAGGAGGAGGAAAAGAATCGATTGGAGCTGGAGAAATTCGAACAAAAGTTCGGTAAGCGTAAACCCAAGGAACGCAAAGCAGTGGATGTTGAGCCAACTAAAATGGATATAAATTGGAAACGTCTGGCCATCTATATAGTATCTTTCCTAGCGGTAATGGGCGCTCTAGGCGTGGCATACTACGCAGACagttaa
Protein Sequence
MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQSTSDGSNAIKRNDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPADRPTQYDCFCGKEINPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANKSCLCEKSAKRSVRCLDKNWQCQQTCQALLSCGKHKCNQRCHRPGLCPPCTNKSQQPCDCKQEVKIVNCSEPKWKCNKVCGAPFACGLHNCDKVCHAGPCGGGECPLGLRSCPCGKSNKTGNCSEVAETCGDTCQKLLSCGKHTCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKDFTCETKCKLMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRNVPCGREKSARIACQELCRISAKCHHAIKHRCHKGECPPCGQPCGLPNDTSGCGHTCKARCHAAIRATKPTDAAARQRVNKYDYRALPHPRCEEGVTVTCIGGHEVATWPCWNSKPSSCQRKCARKLKCGSHTCSLVCHAVPNLQDMQQQVGCGKCEQGCDVPRPPGCVHACAKGCHPPPCAPCAFVIKSKCHCALNQIVYKCSEFYNGVGTEQEILDHREKLRSCGNRCLKNFACGHRCLAICHSGQCPNPELCRKKVRIYCACKRIKLEVSCDKHRAGQTSLDCDANCQAERSKAKATEQQQLEQRLRQEEEKNRLELEKFEQKFGKRKPKERKAVDVEPTKMDINWKRLAIYIVSFLAVMGALGVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00510951;
80% Identity
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