Halb005747.1
Basic Information
- Insect
- Hirtodrosophila alboralis
- Gene Symbol
- nfxl1
- Assembly
- GCA_035043045.1
- Location
- JAWNNH010000218.1:700074-703394[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2e+04 -8.1 6.4 15 19 156 160 155 160 0.82 2 20 0.13 1.3e+03 -0.3 0.4 4 10 191 197 190 197 0.95 3 20 6.6e-08 0.00064 19.8 15.5 1 18 205 221 205 222 0.98 4 20 1.1 1e+04 -3.2 2.7 6 10 248 252 247 252 0.89 5 20 5.5e-08 0.00054 20.0 15.9 1 19 258 277 258 277 0.98 6 20 1.1 1.1e+04 -3.3 0.6 5 10 301 306 301 306 0.92 7 20 9.9e-08 0.00097 19.2 14.6 1 19 312 331 312 331 0.96 8 20 0.9 8.7e+03 -3.0 0.5 1 7 355 360 354 362 0.49 9 20 3.4e-08 0.00033 20.7 10.3 1 18 365 382 365 383 0.96 10 20 0.71 6.9e+03 -2.7 0.4 1 5 392 396 392 401 0.73 11 20 0.00036 3.5 7.8 17.2 1 18 417 434 417 435 0.97 12 20 3.4e-08 0.00033 20.7 14.7 1 19 444 462 438 462 0.90 13 20 1.2 1.2e+04 -3.4 0.7 6 10 490 494 489 494 0.87 14 20 4.7e-05 0.45 10.7 7.4 9 18 507 516 505 517 0.89 15 20 0.09 8.8e+02 0.2 4.9 1 11 529 538 528 539 0.89 16 20 0.87 8.5e+03 -3.0 1.4 6 10 595 599 594 599 0.88 17 20 7.8e-06 0.076 13.2 4.5 1 11 605 615 605 616 0.96 18 20 0.013 1.2e+02 2.9 14.1 4 19 646 661 644 661 0.93 19 20 1.7 1.7e+04 -3.9 1.6 8 13 666 671 665 671 0.74 20 20 1.8e-06 0.017 15.2 10.3 1 16 712 726 712 732 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTCAATAAAGCGCAGGCAAAGAATTTGGCAGCTGCACAGAAACTTGTGGATGCGTACGCTTCAAGTTCGGAGGAGGATGAAGGCGAACTGGATGAAAAGCATATTCTGgATCTATTATACAAGCATTATCAGACCACCACGCCGGATAGCTTAAAAGTCAGCAGACCAAGTGACAATAATGTAAACCGCACAGCAACATTTCTGGAGAATACGCTACACTCGGGTGCAGCAACTTGTCTGATTTGCATTGGCAGCATACGACGCGTGGAGTCCATATGGAGCTGCAAGAACTGCTATTGCTTCTTTCATCTGAACTGCATTCAACGCTGGGCCAATGACAGCGTCATGCAAATGAAAGTCAAGGCGGAGCAGCAAAACGGCAGCGGCAATCAGGGTCATTACAATCATTTGGGCGAGTTTGTGCCGCCCAAGCGTCAGAAATCGTTGCACTGGTGTTGTCCACAATGCCGTCGGGACTATCAGCCCGCCGAGCGGCCCACACAATACGATTGCTTTTGCGGCAAGGAGCTAAATCCACAACCGCAGCCATTTCTTGTGCCGCACTCTTGTGGTGAGATTTGCGGGAAACTGTTGCAGCCCAAATGCGGCCACGATTGCAAACTGCTCTGCCATCCCGGTCCGTGTCCACCTTGCGCTCAATTGGCGCACAATTCGTGTCTTTGCGGCAAATCAGCGCCACGCTCGGTACGCTGCATTGACAAGAACTGGCAGTGCCAGCAAACGTGTCAAGCGCTTTTAGCATGTGGCAAGCACAAGTGCAACCAAAGATGTCATCGCTCTGGCCAATGCCCGCcctgcagcagcaaaagctcACAACCCTGCGATTGCAAGCGCGAGCAGAAAATTGTCAACTGTTCGGAGCCCAAATGGAAATGTAACAATatttgtgGCACTCCATTTGCGTGTGGGCTGCACAACTGTGAAAAGATCTGCCATGCGGGTCCTTGCGGCGGTGAATGCCCCCTAGGCGTACGCAGCTGTCCCTGCGGCAAAAGCAGCAAAGCAGGTAGTTGCAGCGAGGCGCAGGACACTTGTGGCGACACTTGCCAGAAACTATTGTCCTGTGGCAAGCATACATGTGCGCAACGCTGTCATCGCGGAGCTTGCAACTTGTGCCTGGTGCGCACCAAGAAAAAATGCCGATGCGGACTGCATGAAAAGGAGCTGCCCTGCTCAAAGGATTTCAATTGCGAAACAAAGTGCAAACAAATGCGTGATTGTGGCAAGCATGCTTGTAATCGCAAGtgctGTGGCGATCAGTGTCCGCCTTGTGAAAAGATCTGCGGCAAGCAGCTCAGCTGCAACAAACATAAATGTCAGTCTGTATGCCACAATGGACCCTGCTATCCCTGCAAATTGGAGTCCCAGGTGAATTGTCGCTGTGGAAAGACGCGACGCAGCGTGCCCTGTGGACGGGAGAAGAGTGCACGCATTGCCTGTCCAGAGCTCTGCCGcaTCACGGCAAAATGTCATCATATGATTAAACATCGTTGCCATAAGGGCGAGTGTCCACCTTGCAATCAGCCATGTGGTCTGCGGAATGATAACAGCGGCTGTTCTCACATTTGCAAGGCGCGTTGCCATGCAGCGATGCGTTTGCCCAAGCCAGTGGATGCTGCAGCACGTTCCCATGCCCAGAAGtatcaATATCGTGCATTGCCGCATCCACGTTGTGAGGAAGCTGTTAGCGTCACTTGCATTGGCGGCCACGAGGTAGCCAACTGGCCTTGTTGGAACTCTAAGCCGTCTTCGTGTCAACGTAAGTGTGCGCGTCAATTGAAATGTGGCAATCATAGCTGCAGTTTGGTCTGCCATGCTGTGCCACAGTTGCAGGATATGCAGCAGCAGGTTGGCTGTGCGAATTGCGAACAAGGATGCGAGATTTCAAGGCCCAATGGCTGTGTGCATGCCTGTGCTCGCGGTTGTCATCCGCCGCCTTGTGCGCCCTGCAGTTTTGTCATCAAGAGCAAATGTCACTGCGGCctaaatcaaattgtttataagtgCAGCGAGTTCTTCAATGAGTCTGGCAGTGTACAAGATATTGTGGAGCGGCGGGAAAAGCTGCGCAGCTGTGGCAATCGTTGCCTAAAAAATttTGAGTGTGGTCATCGCTGCATAACCATCTGCCACTCTGGCAAGTGTCCCAATCCCGAGCTATGCCGCAAAAAAGTGCGCATTTATTGTGTCTGCAAGCGTATCAAGCTGGAGATTGCTTGCGATAAGCATCGAGCGGGTCAAACAAGCTTGGATTGTGATGACAATTGCCAGGCGGAGCGCTCAAAGGCCCAGGccacagagcagcagcagctggagctTAAATTGCGCCAGGAGCAGGAGAAAAATCGTCTTGAGCTGGAGAAATTCGAACAGAAGTTTGCCAAGCGTAAGCCCAAAGAGCGCAAAGCAATCGATGTGGGGCCAACCAAATCAAACATCGATTGGAAACGTATATCCATCTATGCGGCGGCCTTATTGGCTGTGCTTGGTGCTTTGGCCGTCGCATACTATGCAGACAGCTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDAYASSSEEDEGELDEKHILDLLYKHYQTTTPDSLKVSRPSDNNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCKNCYCFFHLNCIQRWANDSVMQMKVKAEQQNGSGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAERPTQYDCFCGKELNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHNSCLCGKSAPRSVRCIDKNWQCQQTCQALLACGKHKCNQRCHRSGQCPPCSSKSSQPCDCKREQKIVNCSEPKWKCNNICGTPFACGLHNCEKICHAGPCGGECPLGVRSCPCGKSSKAGSCSEAQDTCGDTCQKLLSCGKHTCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKDFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIACPELCRITAKCHHMIKHRCHKGECPPCNQPCGLRNDNSGCSHICKARCHAAMRLPKPVDAAARSHAQKYQYRALPHPRCEEAVSVTCIGGHEVANWPCWNSKPSSCQRKCARQLKCGNHSCSLVCHAVPQLQDMQQQVGCANCEQGCEISRPNGCVHACARGCHPPPCAPCSFVIKSKCHCGLNQIVYKCSEFFNESGSVQDIVERREKLRSCGNRCLKNFECGHRCITICHSGKCPNPELCRKKVRIYCVCKRIKLEIACDKHRAGQTSLDCDDNCQAERSKAQATEQQQLELKLRQEQEKNRLELEKFEQKFAKRKPKERKAIDVGPTKSNIDWKRISIYAAALLAVLGALAVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- -
- 80% Identity
- -