Dsia007848.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila siamana
Gene Symbol
nfxl1
Assembly
GCA_035047445.1
Location
JAWNPP010000046.1:413396-416623[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 1.6e+04 -8.1 6.4 15 19 149 153 148 153 0.82
2 21 0.13 1e+03 -0.3 0.4 4 10 184 190 183 190 0.95
3 21 6.5e-08 0.00051 19.8 15.5 1 18 198 214 198 215 0.98
4 21 1 8.2e+03 -3.2 2.7 6 10 241 245 240 245 0.89
5 21 1.4e-07 0.0011 18.8 17.1 1 18 251 269 251 270 0.97
6 21 5.6e-08 0.00044 20.0 14.1 1 19 305 324 305 324 0.96
7 21 0.89 7e+03 -3.0 0.5 1 7 348 353 347 355 0.49
8 21 4e-08 0.00032 20.5 11.9 1 18 358 375 358 376 0.96
9 21 0.7 5.5e+03 -2.7 0.4 1 5 385 389 385 394 0.73
10 21 2 1.6e+04 -5.0 2.3 5 10 399 404 399 404 0.91
11 21 0.004 32 4.5 19.1 1 18 410 427 410 428 0.97
12 21 3.5e-08 0.00028 20.7 14.8 1 19 437 455 431 455 0.90
13 21 1.2 9.6e+03 -3.4 0.7 6 10 483 487 482 487 0.87
14 21 2.4e-05 0.19 11.6 7.6 9 19 500 510 498 510 0.89
15 21 0.0037 29 4.6 5.5 1 11 522 531 522 532 0.95
16 21 0.86 6.8e+03 -2.9 1.4 6 10 586 590 585 590 0.88
17 21 9e-06 0.071 13.0 4.1 1 11 596 606 596 607 0.96
18 21 2 1.6e+04 -6.9 5.9 1 10 620 627 620 627 0.78
19 21 0.0027 21 5.1 13.1 4 18 637 651 635 652 0.94
20 21 2 1.6e+04 -5.2 2.5 4 6 657 659 656 660 0.65
21 21 4.2e-07 0.0033 17.2 9.2 1 16 706 720 706 726 0.93

Sequence Information

Coding Sequence
ATGGAAAAGTTTAACAAAGCACAGGCCAAAAATTTGGCAGCTGCGCAAAAATTGGTGGACACATACGACTCTAGTTCCGAGGATGAAGGCGAACTGGATGAGAAGCATATACTGGATTTGCTATATAAACATTACCAAAGCGCACCAGGCAAAAGCAATGAAGGCAACGCTGCAAATCGCACAGCAACCTTTCTGGAGAACACCTTGCACTCTGGGGCCGCAACATGCTTAATTTGTATAGGCAGCATACGACGTGTGGAGTGCATTTGGTCGTGCAAGAGTTGTTACTGCTTCTTCCACTTGAACTGCATTCAGCGCTGGGCCAACGACAGTCTCATGCAAATGAAAGTGAAGGCCGAACAGCAGAATGGCAGTCAGCAAGGATACTACAATCATCTGGGCGAGTTTGTGCCGCCAAAACGTCAAAAGGCAATGCACTGGTGTTGTCCACAGTGCCGCCGTGATTATCAACCTGGCGACCGACCAACGCAATACGATTGCTTTTGCGGCAAGGAGCCCAATCCGCAACCACAACCGTTTCTGGTGCCACATTCGTGTGGTGAAATTTGTGGCAAATTGTTGCAGCCAAAATGTGGACATGATTGCAAACTGCTGTGCCATCCTGGTCCATGCCCACCCTGCGCTCAACTGGCGCATAGCTCTTGCCTGTGTGGCAAGTCACCAGCGCGCTTAGTGCGTTGTCTCGACAAGAACTGGCAGTGTCAACAAACATGTCAAGCACTTTTGGCATGTGGAAAGCACAAGTGCAACCAGAGGTGTCATCGACCTGGCCAGTGCCCGCCGTGCAACAGTAAGAGCTCACAGCCCTGTGATTGCAAACAGGAAACGAAGGTTGTTAACTGCTCCGAGCCCAAGTGGAAGTGCGGCAGAATATGTGGCGCTTCTTTTGCTTGCGGTGTGCATTACTGCGAGAAACTATGCCATTCTGGCCCTTGTGGAGGCGAATGTCCTTTAAACGTGCGCAGCTGTCCCTGCGGCAAGACGGTCAAAACGGGCAGCTGTGGTGAGATAGCGGAGACTTGTGGCGACACGTGCCAGAAATTATTATCCTgcggcacacacacttgtgcaCAACGCTGTCATCGTGGTCCCTGCAATTTGTGTCTGTTGCGCACCAAGAAGAAATGCCGCTGCGGATTGCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTTACTTGCGAAACGAAGTGCAAACAGATGCGCGATTGTGGCAAGCATGGCTGCAATCGCAAGTGCTGCGGGGATCAGTGTCCACCGTGCAACAAGATTTGCGGCAAGCAATTAAACTGCAACAAGCACAAGTGTCAGTCTGTCTGCCACAATGGACCGTGCTACCCCTGTAAAATGGAGTCACAGGTGAACTGTCGGTGCGGTAAGACGCGACGCAATGTGCCTTGTGGACGGGAGAAAAACGCGCGTATTGCCTGTCCGGAGTTGTGCCGCATCACGGCCAAGTGTCATCATGTAATCAAGCATCGATGCCACAAAGGTGACTGTCCACCGTGCTCCCAGACATGTGGATTATCTAATGACTCAAACGATTGTGGACACATTTGTCAAGCACGTTGTCATGCCGCTATCCGGGTGACCAAGCCAGCAGATTCGCGTTCACGGTTTAATAAGTATGAGTATCGCGCGTTGCCGCATCCACGTTGTGAGCAACCAGTTGTAGTCACCTGCATAGGAGGTCATGAGGTGGCTACCTGGCCGTGTTGGAACTCCAAGCCCTCATCATGTCAGCGGAAATGTGCGCGAAAATTAAACTGTGGCAATCACAGTTGTGCTCTCGTCTGTCATGTCGTGCCCAATCCTCAGGatatgcagcagcaattggGCTGTGGCAATTGCGAGCAAGGATGTCAAATTACTCGGCCAACTGGATGTGTGCATTCATGTACGCGCGGCTGTCACCCAGCACCTTGTGCGCCTTGCGCCTTTGTCATCAAACACAAATGCCACTGTACTCTCAATCAGATTGTGTATAAGTGCAGCGAGTACTTCAACGAATTGGGCACAAACGGCCAGGAGGAAacattgctgcagcagcgtgaAAAACTGCGTAGCTGTGGCAATCGTTGCATAAAGAACTTTGCCTGCGGCCATCGTTGCATGGCCATCTGCCACTCCGGCAAGTGTCCAAATTCACAGCTGTGCCGTAAAAAAGTGCGCATTTACTGCAGCTGTAAACGCATTAAATTGGAGGTAGCTTGTGACAAGCATCGTGCTGGTCAAATATCATTAGACTGCGATGATAACTGTCTCGCTGAACGCTCAAAGACAGAGGCactggagcaacagcagctggagctgcgaTTGCGTCAGGAGGAGGCAAAGAATAAATTGGAGCTGGAAAAATTCGAACAGAAGTTCGGAGAACGGAAACCCAAGGAACGCAAAACTATTGACGTCGAGCCTACCAAATTACATATAGATTGGAAACGCGTGGCTATCTATGTGGTATCCTTGCTGGTTGTAGTGGGAGCTCTGGTCGTTGCGTTCTATGCCGATAGTTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDTYDSSSEDEGELDEKHILDLLYKHYQSAPGKSNEGNAANRTATFLENTLHSGAATCLICIGSIRRVECIWSCKSCYCFFHLNCIQRWANDSLMQMKVKAEQQNGSQQGYYNHLGEFVPPKRQKAMHWCCPQCRRDYQPGDRPTQYDCFCGKEPNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSPARLVRCLDKNWQCQQTCQALLACGKHKCNQRCHRPGQCPPCNSKSSQPCDCKQETKVVNCSEPKWKCGRICGASFACGVHYCEKLCHSGPCGGECPLNVRSCPCGKTVKTGSCGEIAETCGDTCQKLLSCGTHTCAQRCHRGPCNLCLLRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHGCNRKCCGDQCPPCNKICGKQLNCNKHKCQSVCHNGPCYPCKMESQVNCRCGKTRRNVPCGREKNARIACPELCRITAKCHHVIKHRCHKGDCPPCSQTCGLSNDSNDCGHICQARCHAAIRVTKPADSRSRFNKYEYRALPHPRCEQPVVVTCIGGHEVATWPCWNSKPSSCQRKCARKLNCGNHSCALVCHVVPNPQDMQQQLGCGNCEQGCQITRPTGCVHSCTRGCHPAPCAPCAFVIKHKCHCTLNQIVYKCSEYFNELGTNGQEETLLQQREKLRSCGNRCIKNFACGHRCMAICHSGKCPNSQLCRKKVRIYCSCKRIKLEVACDKHRAGQISLDCDDNCLAERSKTEALEQQQLELRLRQEEAKNKLELEKFEQKFGERKPKERKTIDVEPTKLHIDWKRVAIYVVSLLVVVGALVVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00589934;
80% Identity
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