Dhis013892.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila histrio
Gene Symbol
nfxl1
Assembly
GCA_958299025.2
Location
OY729166.1:6602276-6605854[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 2.2e+04 -8.1 6.4 15 19 153 157 152 157 0.82
2 21 0.13 1.4e+03 -0.3 0.4 4 10 188 194 187 194 0.95
3 21 6.6e-08 0.00071 19.8 15.5 1 18 202 218 202 219 0.98
4 21 2 2.2e+04 -4.2 2.2 6 10 245 249 244 249 0.83
5 21 1.3e-07 0.0014 18.9 17.2 1 19 255 274 255 274 0.97
6 21 0.57 6.2e+03 -2.4 1.2 5 10 298 303 298 303 0.94
7 21 1.2e-07 0.0013 18.9 15.3 1 19 309 329 309 336 0.95
8 21 0.89 9.7e+03 -3.0 0.5 1 7 353 358 352 360 0.49
9 21 3.4e-08 0.00037 20.7 10.3 1 18 363 380 363 381 0.96
10 21 0.7 7.7e+03 -2.7 0.4 1 5 390 394 390 399 0.73
11 21 0.00036 3.9 7.9 17.2 1 18 415 432 415 433 0.97
12 21 3.4e-08 0.00037 20.7 14.7 1 19 442 460 436 460 0.90
13 21 0.37 4e+03 -1.8 1.1 6 10 488 492 487 492 0.92
14 21 0.00016 1.7 9.0 8.6 9 18 505 514 503 515 0.91
15 21 0.011 1.2e+02 3.1 5.6 1 11 527 536 527 537 0.95
16 21 0.87 9.4e+03 -3.0 1.4 6 10 593 597 592 597 0.88
17 21 7.8e-06 0.084 13.2 4.5 1 11 603 613 603 614 0.96
18 21 2 2.2e+04 -6.9 5.9 1 10 627 634 627 634 0.78
19 21 0.023 2.5e+02 2.1 14.0 4 18 644 658 642 659 0.94
20 21 3.1e-06 0.033 14.5 10.7 1 16 710 724 710 730 0.92
21 21 0.62 6.7e+03 -2.5 0.5 11 16 760 765 760 766 0.80

Sequence Information

Coding Sequence
ATGGAAAAATTTAACAAGGCACAGGCAAAAAACTTGGCGGCAGCTCAGAAACTGGTGGATGCATACGCTTCCAGTTCGGAAGATGAGGGCGAACTGGATGAGAAGCATATATTGGATTTGTTATACAAGCATTACAAAGGCACCGCGGATGGATTAAATGCTGGCGTTAAACGCAATGACAACAATGCCAATCGCACGGCAACTTTCCTGGAGAACACACTGCACTCGGGAGCGGCAACgtgtttgatttgcattggAAGCATACGACGCGTTGAGTCGATTTGGTCCTGCAAGAGTTGTTATTGCTTCTTCCACCTGAACTGCATTCAGCGTTGGGCCAACGATAGCGTTATGCAGATGAAAGTCAAGGCGGAACAGCAAAATGGAAATCAGGGACATTATAATCACCTGGGCGAGTTTGTGCCGCCCAAACGTCAGAAATCACCGCATTGGTGTTGTCCACAGTGTCGCCGAGACTATCAGCCGGCAGATCGACCTACACAGTACGATTGCTTCTGTGGCAAGGAGCTCAATCCGCAGCCACAGCCTTTTCTGGTGCCGCACTCCTGTGGCGAAATTTGTGGCAAACTGTTGCAGCCGAAATGTGGCCACGATTGCAAGCTACTGTGTCATCCTGGACCATGTCCACCTTGTGCTCAATTGGCGCACAGTTCTTGTCTTTGCGGCAAATCTGCGCCACGTTCCGCGCGTTGCATCGACAAAACTTGGCAGTGCCAACAAAGTTGTCAAGCGCTTCTGTCGTGTGGCAAGCACAAGTGCAACCAAAGATGCCACCGGCCTGGCCAGTGTCCGCCTTGCACCAACAAGAGCTCCCAGCACTGCGATTGCAAGCGGGAAGTCAAGATTGTCAATTGCTCCGAACCGAAGTGGAAGTGCAGCAAAGTTTGTGGCGCTGCTTTTGCTTGTGGTCTGCACAATTGTGAGAAGGTGTGTCATGCTGGTCCTTGTGGAGGCGGAGAATGTCCTTTGGGAATGCGCAGCTGTCCCTGTGGCAAGAGCagcAAAGCGGGCGTCTGCAGCGAGGTGATGGAAACCTGCGGCGACACTTGCCAGAAACTGTTGTCATGTGGCAAGCATACGTGTGCACAACGCTGTCATCGTGGAGCTTGCAACCTGTGTCTGGTGCGTACGAAGAAGAAGTGTCGTTGTGGCTTGCATGAGAAGGAGTTGCCTTGTTCCAAGGACTTCAACTGCGAAACAAAGTGCAAGCAGATGCGTGATTGTGGCAAGCATGCTTGCAACCGCAAGtgTTGTGGCGATCAGTGTCCGCCGTGTGAGAAGATCTGTGGCAAGCAGCTGAGTTGCAACAAGCACAagtgtcagtctgtctgtcacaATGGACCTTGTTATCCCTGCAAACTGGAGTCCCAGGTGAACTGTCGCTGTGGCAAGACCCGACGCAGCGTGCCGTGTGGCAGGGAAAAGAACGCAAGGATTGCCTGTCAGGAGTTGTGCAGAGTCACTGCCAAGTGTCATCACGCCATAAAACATCGCTGTCACAAAGGAGAATGTCCGCCTTGTGGACAACCTTGTGGTTTGCCCAACGACAACAGCGGTTGCGGGCACATTTGCAAGGCACGCTGTCATGCGGCCATAAGGATTAACAGGCCAGGAGATGCTGCAGTACGTCCACGTGGCAATAAATATGAATATCGCGCTCTGCCGCATCCCCGTTGTGAGGAGGGCGTCATTGTCACCTGCATTGGCGGCCATGAAGTGGCCACTTGGCCTTGTTGGAACTCCAAGCCGTCGTCCTGCCAGCGCAAATGTGCGAGAAAGTTGAAATGTGGCAATCACAGCTGTTCATTGGTCTGTCATGCTGTGGCCAATCCGCAGGatatgcaacaacaagttggaTGTGGCAATTGCGAGCAGGGCTGCAACATTGCAAGACCCACAGGCTGTGTGCATGCCTGTGCCAAGGGTTGCCATCCACCACCTTGTGCGCCTTGTGCTTTCGTAATTAAAACCAAATGCCATTGCGCCCTCAACCAGATTGTCTACAAGTGCAGCGAGTTCTACAACAAAGTCGGCACTGCTCAGGAGATTGCGGAGCATCGGGAGAAGCTCAAAAGTTGTGGCAATCGTTGTCTGAAGAATTTTGCCTGTGGCCATCGCTGCCTGACCATTTGTCACTCCGGCCAGTGTCCCAATCCCGAGCTGTGCCGCAAGAAAGTGCGTATTTATTGCGCCTGCAAGCGCATTAAACTGGAAATAGCCTGTGACAAACATCGCGCAGGACAAACATCTTTGGATTGCGATGGCAATTGTCAGGCTGAACGTTCCAAGGCGGAGGCGACggaacagcagcaattgcagcaaAGATTGCGACAGGAGGAGGCAAAGAATCGACTGGAGTTGGAGAAATTCGAACAGAAGTTTGGCAAGCGAAAGCCCAAGGAACGCAAAGCTGTAGATGTTGAGCCAACAAAGTTGAATATAAATTGGCAACGTTTATCCATCTATTTGGTAGCATTCCTGGCGGTAATGGGCGCTCTGGGCGTGGCCTACTATGCAGACAGTTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYKGTADGLNAGVKRNDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEFVPPKRQKSPHWCCPQCRRDYQPADRPTQYDCFCGKELNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSAPRSARCIDKTWQCQQSCQALLSCGKHKCNQRCHRPGQCPPCTNKSSQHCDCKREVKIVNCSEPKWKCSKVCGAAFACGLHNCEKVCHAGPCGGGECPLGMRSCPCGKSSKAGVCSEVMETCGDTCQKLLSCGKHTCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKDFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKNARIACQELCRVTAKCHHAIKHRCHKGECPPCGQPCGLPNDNSGCGHICKARCHAAIRINRPGDAAVRPRGNKYEYRALPHPRCEEGVIVTCIGGHEVATWPCWNSKPSSCQRKCARKLKCGNHSCSLVCHAVANPQDMQQQVGCGNCEQGCNIARPTGCVHACAKGCHPPPCAPCAFVIKTKCHCALNQIVYKCSEFYNKVGTAQEIAEHREKLKSCGNRCLKNFACGHRCLTICHSGQCPNPELCRKKVRIYCACKRIKLEIACDKHRAGQTSLDCDGNCQAERSKAEATEQQQLQQRLRQEEAKNRLELEKFEQKFGKRKPKERKAVDVEPTKLNINWQRLSIYLVAFLAVMGALGVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00510951;
80% Identity
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