Dnig015777.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila nigricruria
Gene Symbol
nfxl1
Assembly
GCA_037075265.1
Location
JBAMCI010000227.1:1677130-1680210[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.9e+04 -8.1 6.4 15 19 150 154 149 154 0.82
2 19 0.13 1.3e+03 -0.3 0.4 4 10 185 191 184 191 0.95
3 19 6.5e-08 0.00064 19.8 15.5 1 18 199 215 199 216 0.98
4 19 1.9 1.9e+04 -4.1 2.6 6 10 242 246 241 246 0.89
5 19 1.2e-07 0.0012 19.0 16.7 1 19 252 271 252 271 0.98
6 19 0.73 7.1e+03 -2.7 0.8 5 10 295 300 295 300 0.93
7 19 6.1e-09 6e-05 23.1 11.5 1 19 306 326 306 326 0.93
8 19 0.89 8.7e+03 -3.0 0.5 1 7 350 355 349 357 0.49
9 19 1.3e-07 0.0012 18.9 10.3 1 18 360 377 360 378 0.96
10 19 0.7 6.8e+03 -2.7 0.4 1 5 387 391 387 396 0.73
11 19 0.00036 3.5 7.9 17.2 1 18 412 429 412 430 0.97
12 19 3.4e-08 0.00033 20.7 14.7 1 19 439 457 433 457 0.90
13 19 1.1 1.1e+04 -3.3 2.0 6 10 485 489 485 489 0.98
14 19 0.0071 69 3.7 6.1 9 18 502 511 500 512 0.90
15 19 0.011 1e+02 3.1 5.6 1 11 524 533 524 534 0.95
16 19 0.86 8.4e+03 -2.9 1.4 6 10 589 593 588 593 0.88
17 19 8.8e-07 0.0086 16.2 5.1 1 11 599 609 599 610 0.96
18 19 0.028 2.8e+02 1.8 14.8 3 18 639 654 638 655 0.92
19 19 1.1e-06 0.011 15.9 12.4 1 16 706 720 706 726 0.92

Sequence Information

Coding Sequence
ATGGAAAAGTTTAATAAAGCGCAGGCCAAAAACTTGGCAGCTGCACAGAAATTAGTGAATGCCTACGCCTCCAGCTCTGAGGATGAAGGCGAACTGGATGAAAAGCATATACTTGATCTTTTATACAAACATTACAAGGCTCCAGTGGCTGCAGCAAGTGACAACAATGTCAACCGCACCGCCACATTTCTGGAGAATACTCTGCACTCGGGCGCTGCTACGTGTCTAATTTGCATTGGCAGCATTCGCCGCGTGGAATCCATTTGGTCATGCAAGAGCTGCTATTGCTTTTTCCACCTGAATTGCATCCAGCGCTGGGCCAACGACAGCGTAATGCAAATGAAGGTCAAggcggagcagcagcagcagaccaATGGCAATCAAGGCCATTACAATCATCTGGGCGAGTTTGTACCGCCTAAGCGTACAAAATCGATCCACTGGTGCTGCCCACAGTGCCGTAGGGATTACCAGCCCGCCGATCGACCCACACAATATGATTGCTTCTGTGGCAAGGAGCCCAATCCTCAGCCACAGCCCTTCCTTGTGCCGCACTCCTGTGGCGAGATTTGTGGCAAGCTGTTGCAACCGAAGTGTGGCCATGATTGCAAATTGCTTTGCCATCCGGGTCCATGTCCACCATGCGCCCAGCTAGCGAATAGTTCTTGCCTCTGTGGCAAGGCGGCAATGCGGAGTGTGCGGTGCATCGACAAGAACTGGCAGTGCGAACAAAAGTGTCAATCGCTTTTGTCGTGTGGCAAGCACAAATGCAACAAGCGTTGTCATCGACCTGGTCAGTGTCCGCCATGCAGCAGCAAGAGCTCACAGCCCTGCGAATGCAAACGCGAGCAGAAAGTCGTGAACTGTGCGGAGCCCAAATGGAAATGCAGTAATGTCTGTGGCGCTCTGTTTGCTTGTGGTATTCACACCTGTGAGAAAGTATGCCACGCTGGATCCTGTGAAGGCGCAGAGTGCCCCTACGGCGTGCGTAGCTGTCCCTGCGGCAAGAGCAACAAAAGTGGCGGTTGCAACGAGCTGCAGGAGACATGTGGAGACACTTGCCAGAAGCTCTTGTCCTGTGGCAAGCACAACTGCGCGCAGCGCTGTCATCGCGGCGCTTGCAACTTGtGCCTAGTGCGCACGAAGAAGAAATGCCGCTGCGGCCTGCATGAAAAGGAGCTGCCCTGTTCTAAGGAGTTCAACTGCGaaaccaaatgcaaacagaTGCGGGACTGTGGCAAGCATGCTTGCAATCGCAAGTGCTGTGGCGATCAATGTCCGCCCTGTGAGAAGATCTGCGGCAAGCAGCTGAGCTGCAACAAACACAAATGCCAGTCTGTGTGCCACAATGGACCCTGTTATCCCTGCAAGCTGGAATCCCAAGTGAATTGTCGCTGCGGCAAGACGCGACGAAGCGTGCCCTGTGGACGCGAGAAGAACGCGCGCATTGTGTGCCAGGAGCTATGTCGCATTACGTCCAAGTGTCATCATGCCATCAAGCATCGCTGTCACAAGAGCGAATGCCCGCCCTGCGTGCAGCCTTGTGGCTTGGTCAATGATTCCAGCGGCTGTGGACACATTTGCAAGGCTCGCTGCCATGCAGCTCAGCGTGTGCCTCGACCAGATCAGGCGGCTCGTGGACAGCAGCACAAGTATGAATACCGCGCTCTGCCGCATCCACGTTGCGAGGAGAACGTCAGCGTTCGCTGCATTGGCGGCCACGAGCTGGCCACTTGGCCTTGCTGGAACTCCAAGCCTACATCCTGCCAGCGTAAGTGCGCGCGCCAGCTCAAGTGTGGCAATCATCGATGCGATCGGGTCTGCCATGCAGTGCCTCAACCAGACGATATGCAGCAGCAAGTAGGCTGTGCGAATTGTGAACAAGGCTGCGCTATTCCTCGTCCTGCTGGCTGCACCCATGCCTGTGCCAAGGGCTGTCATCCGCCACCTTGTGCTCCATGTGCATTTGTGATCAAAAACAAATGCTACTGCGGTCTCAATCAGGTTATATACAAGTGTAGCGAGTACTTCAATGAGGAGGGCAGTTTGCAGGAGACGCTGGAGCGACGGCAAAGGTTCAACAGCTGTGGGAATCGTTGCCTCAAGAATTTCAATTGTGGCCATCGCTGCTTGACCGTTTGCCATCCTGGGCCCTGTCCCAATCCCGAGCTTTGTCGCAAGAAGTTGCGCATCTATTGCAAGTGCAAACGTCTAAAGCAGGAAATCGCCTGCGACAAACATCGCGCAGGCCAAACGTCACTCGATTGCGATGCCAATTGCCAGGCGGAGCGCTCCAAAGCCCAGGCcacagagcagcaacagcagcagcttaagCTGCAGCAGGAACAGGAGAAGAATCGACTGGAGCTGGAGAAATATGAGCAAAAGTTTGGCAAGCGCAAGCACAAGGAGCGTAAAACCTTGGATGTCGAACCCACCAAAGCCAACATCAACTGGCAACGTTTAGGCATCTATGCATTATCCGTGCTGGCCGTAATAGGCGCACTGGGCGTGGCATACTATGCAGACAGCTAG
Protein Sequence
MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYKAPVAAASDNNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQQTNGNQGHYNHLGEFVPPKRTKSIHWCCPQCRRDYQPADRPTQYDCFCGKEPNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANSSCLCGKAAMRSVRCIDKNWQCEQKCQSLLSCGKHKCNKRCHRPGQCPPCSSKSSQPCECKREQKVVNCAEPKWKCSNVCGALFACGIHTCEKVCHAGSCEGAECPYGVRSCPCGKSNKSGGCNELQETCGDTCQKLLSCGKHNCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKNARIVCQELCRITSKCHHAIKHRCHKSECPPCVQPCGLVNDSSGCGHICKARCHAAQRVPRPDQAARGQQHKYEYRALPHPRCEENVSVRCIGGHELATWPCWNSKPTSCQRKCARQLKCGNHRCDRVCHAVPQPDDMQQQVGCANCEQGCAIPRPAGCTHACAKGCHPPPCAPCAFVIKNKCYCGLNQVIYKCSEYFNEEGSLQETLERRQRFNSCGNRCLKNFNCGHRCLTVCHPGPCPNPELCRKKLRIYCKCKRLKQEIACDKHRAGQTSLDCDANCQAERSKAQATEQQQQQLKLQQEQEKNRLELEKYEQKFGKRKHKERKTLDVEPTKANINWQRLGIYALSVLAVIGALGVAYYADS