Dlim019190.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila limbata
Gene Symbol
nfxl1
Assembly
GCA_963924055.1
Location
OZ001354.1:5806306-5810416[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 2 2.8e+04 -8.1 6.4 15 19 155 159 154 159 0.82
2 21 0.13 1.8e+03 -0.3 0.4 4 10 190 196 189 196 0.95
3 21 6.6e-08 0.00091 19.8 15.5 1 18 204 220 204 221 0.98
4 21 1 1.5e+04 -3.2 2.7 6 10 247 251 246 251 0.89
5 21 1.9e-06 0.026 15.2 16.5 1 19 257 276 257 276 0.97
6 21 0.94 1.3e+04 -3.1 0.9 5 10 300 305 300 305 0.93
7 21 1.7e-07 0.0023 18.5 15.3 1 19 311 331 311 338 0.95
8 21 0.9 1.2e+04 -3.0 0.5 1 7 355 360 354 362 0.49
9 21 2.2e-08 0.00031 21.3 12.0 1 18 365 382 365 383 0.96
10 21 0.71 9.8e+03 -2.7 0.4 1 5 392 396 392 401 0.73
11 21 2 2.8e+04 -5.0 2.3 5 10 406 411 406 411 0.91
12 21 0.0045 63 4.4 19.2 1 18 417 434 417 435 0.97
13 21 3.4e-08 0.00047 20.7 14.7 1 19 444 462 438 462 0.90
14 21 1.2 1.7e+04 -3.4 0.7 6 10 490 494 489 494 0.87
15 21 0.00016 2.2 9.0 8.6 9 18 507 516 505 517 0.91
16 21 0.011 1.5e+02 3.1 5.6 1 11 529 538 529 539 0.95
17 21 0.87 1.2e+04 -3.0 1.4 6 10 594 598 593 598 0.88
18 21 7.8e-06 0.11 13.2 4.5 1 11 604 614 604 615 0.96
19 21 2 2.8e+04 -6.9 3.9 1 7 628 632 628 635 0.54
20 21 0.0078 1.1e+02 3.6 14.1 4 18 645 659 643 660 0.93
21 21 4.9e-06 0.069 13.8 10.5 1 16 711 725 711 731 0.92

Sequence Information

Coding Sequence
ATGGAAAAATTCAACAAGGCGCAGGCAAAGAATTTAGCAGCAGCCCAAAAACTGGTGGATGCATATGCCTCCAGTTCCGAAGATGAGGGCGAGCTGGATGAGAAGCATATTCTGGATTTGTTATACAAGCATTACCAAGGCACCTCGGATGCAGGATCGAATGCAGGCGGCAAACGTAGTGACAACAATGCCAATCGCACAGCAACGTTCCTGGAGAACACGCTGCACTCGGGAGCGGCAACGTGTTTGATTTGCATTGGCAGCATTCGTCGGGTGGAGTCCATTTGGTCCTGCAGGAGTTGTTACTGCTTCTTTCATCTGAACTGCATTCAGCGCTGGGCCAACGACAGTGTGATGCAAATGAAAGTCAAAGCGGAGCAGCTGCAAAATGGCAACCAGGGACATTACAATCATCTGGGCGAATTTGTGCCGCCCAAGCGTCAAAAATCGCTGCATTGGTGTTGTCCACAGTGTCGCAGGGACTATCAGCCGGCAGATCGACCCACACAGTATGATTGCTTCTGCGGCAAGGAGATGAATCCGCAGCCACAGCCTTTTTTGGTGCCGCACTCCTGTGGCGAAATCTGCGGCAAGTTGTTGCAGCCGAAATGTGGCCACGACTGCAAGCTGCTGTGTCATCCGGGTCCGTGTCCACCCTGCGCTCAATTGGCGCATAGTTCCTGCCTCTGTGGCAAGTCGGCGCCACGTTCCGTGCGCTGCATCGACAAGACTTGGCAGTGCCAACAAACTTGTCAAGCGCTTTTAGCCTGTAGCAAGCACAAGTGCAACCAAAGATGCCATCAACCTGGACAGTGTCCGCCCTGCACTAACAAGAGCTCCCAGCACTGCGATTGCAGACAGGAAGTCAAGGTTGTCAACTGCTCCGAGCCCAAATGGAAGTGCAGCAAAATATGCGGCACTCCATATGCCTGTGGACTGCACAGCTGTGAGAAGGTGTGTCATGCGGGTCCTTGCGGAGGCGGCGAATGTCCTTTGGGTCTGCGCAGCTGTCCCTGTGGCAAGAGTAGCAAAGCAGGCATCTGCAGCGAGGTGGTGGAAACCTGTGGCGACACTTGCCAGAAGCTGTTGTCCTGTGGCAAGCACACGTGTGCGCAGCGCTGCCATCGAGGACCTTGCAACCTGTGCCTGGTGCGCACCAAGAAAAAGTGTCGCTGTGGCCTGCATGAGAAGGAGCTGCCCTGCTCCAAGGAATTCACCTGCGAGACAAAGTGCAAGCAGATGCGCGATTGTGGCAAGCATGGCTGCAACCGCAAGTGTTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAATCCGTGTGCCACAACGGACCCTGTTATCCCTGCAAGTTGGAGTCCCAGGTCAACTGTCGCTGCGGCAAGACACGACGCAGCGTGCCCTGTGGCAGGGAAAAGAGCGCTAGGATTGCCTGCCCGGAGTTGTGCAGAATCTCCGCCAAGTGTCATCATGCCATAAAGCATCGTTGTCACAAAGGGGAATGCCCGCCGTGTGGACAACCATGTGGTTTGCCCAATGACACCAACAATTGTGGCCACATTTGCAAGGCGCGCTGTCATGCAGCCGTCGGAGTCAACAAGCCAGCGGATGCAGTGCGTCCACATGCCAATAAGTATGAGTATCGTGCTCTGCCGCATCCACGTTGTGAGGAGGGCGTCAGTGTCACCTGCATTGGTGGCCACGAGCTGGCCACTTGGCCCTGCTGGAACTCCAAGCCGTCGTCCTGCCAGCGCAAATGTGCCAGGAAGTTGAAATGCGGCAATCACAGCTGCTCTTTGGTCTGTCATGCTGTGCCCAATCCACAGGACATGCAGCAACAAGTTGGTTGTGGCAATTGTGAGCTAGGTTGTGACATTCCCAGACCACCAGGCTGTGTACACGCCTGTCCCAGAGGATGTCATCCAGCTCCATGTGCGCCATGTAATTTTGTTATCAAGACCAAGTGTCATTGTGCCCTCAACCAGATTGTATACAAGTGCAGCGAATTCTACAACGAAGTCGGAACTGAGCTGGAGATTCTGGAGCATCGGGAGAAGCTAAGGAGCTGTGGCAACCGTTGCCTAAAGAATTTTGCCTGTGGTCATCGTTGCCTGACCATTTGTCACTCCGGCAAGTGTCCCAATCCAGAGCTGTGCCGCAAAAAGCTGCGCATTTACTGTGCCTGCAAGCGGATTAAGCTGGAAATAGCCTGCGACAAGCATCGCGCAGGTCAAACATCTTTGGACTGCGATGCCAACTGTCAGGAGGAACGTTCCAAGGCGCAGGCGacggagcaacagcagctggagcAAAGACTGCGACAGGAGGAGGCCAAGAATCGACTGGAGTTGGAGAAGTTCGAACAGAAGTTTGGCAAGCGAAAAACCAAGGAACGCAAAGCTGTAGATGTGGAGAAAACCAAATCAGACATTGACTGGAAGCGTCTAGCTATCTATATGGTATCATTCCTGGCTGTGATGAGCGCTCTGGGCGTGGCATACTATGCAGACAGCTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQGTSDAGSNAGGKRSDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCRSCYCFFHLNCIQRWANDSVMQMKVKAEQLQNGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPADRPTQYDCFCGKEMNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKSAPRSVRCIDKTWQCQQTCQALLACSKHKCNQRCHQPGQCPPCTNKSSQHCDCRQEVKVVNCSEPKWKCSKICGTPYACGLHSCEKVCHAGPCGGGECPLGLRSCPCGKSSKAGICSEVVETCGDTCQKLLSCGKHTCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIACPELCRISAKCHHAIKHRCHKGECPPCGQPCGLPNDTNNCGHICKARCHAAVGVNKPADAVRPHANKYEYRALPHPRCEEGVSVTCIGGHELATWPCWNSKPSSCQRKCARKLKCGNHSCSLVCHAVPNPQDMQQQVGCGNCELGCDIPRPPGCVHACPRGCHPAPCAPCNFVIKTKCHCALNQIVYKCSEFYNEVGTELEILEHREKLRSCGNRCLKNFACGHRCLTICHSGKCPNPELCRKKLRIYCACKRIKLEIACDKHRAGQTSLDCDANCQEERSKAQATEQQQLEQRLRQEEAKNRLELEKFEQKFGKRKTKERKAVDVEKTKSDIDWKRLAIYMVSFLAVMSALGVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00510951;
80% Identity
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