Dlac000054.1
Basic Information
- Insect
- Drosophila lacertosa
- Gene Symbol
- nfxl1
- Assembly
- GCA_004143845.1
- Location
- SCDZ01000233.1:55961-59733[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2.1e+04 -8.1 6.4 15 19 152 156 151 156 0.82 2 19 0.087 9.1e+02 0.2 0.4 4 10 187 193 186 193 0.96 3 19 6.5e-08 0.00068 19.8 15.5 1 18 201 217 201 218 0.98 4 19 2 2.1e+04 -4.9 2.5 6 10 244 248 243 248 0.87 5 19 1e-08 0.0001 22.4 16.1 1 19 254 273 254 273 0.98 6 19 1.1 1.2e+04 -3.3 0.6 5 10 297 302 297 302 0.92 7 19 2e-07 0.0021 18.2 16.1 1 19 308 328 308 335 0.95 8 19 0.89 9.3e+03 -3.0 0.5 1 7 352 357 351 359 0.49 9 19 1.6e-07 0.0017 18.6 10.1 1 18 362 379 362 380 0.96 10 19 0.7 7.3e+03 -2.7 0.4 1 5 389 393 389 398 0.73 11 19 0.00036 3.8 7.9 17.2 1 18 414 431 414 432 0.97 12 19 3.4e-08 0.00035 20.7 14.7 1 19 441 459 435 459 0.90 13 19 1.1 1.1e+04 -3.3 2.0 6 10 487 491 487 491 0.98 14 19 3.4e-05 0.35 11.1 6.2 9 18 504 513 502 514 0.92 15 19 0.0019 20 5.5 5.9 1 11 526 535 526 536 0.95 16 19 0.86 9e+03 -2.9 1.4 6 10 590 594 589 594 0.88 17 19 2.7e-06 0.028 14.7 4.4 1 11 600 610 600 611 0.96 18 19 0.0063 66 3.9 15.1 3 18 640 655 639 656 0.92 19 19 3.3e-06 0.035 14.4 11.2 1 16 707 721 707 727 0.92
Sequence Information
- Coding Sequence
- atggaaaagtttaataaagtGCAGGCCAAGAATTTGGCAGCCGCACAGAAACTGGTGGATGCCTACGCCTCCAGTTCGGAGGATGAGGGCGAACTGGATGAAAAGCATATACTTGATCTTCTCTACAAGCATTATCAGGCCACGCCGGTGGCCGCGACTGCGTTCAAAGGTTATGACAACAATGCAAATCGTACAGCCACCTTCCTGGAGAACACGCTGCACTCGGGCGCCGCAACGTGCCTCATCTGCATTGGCAGCATCCGACGCGTGGAGTCCATTTGGTCCTGCAAGAGCTGCTATTGCTTTTTCCATCTGAACTGCATTCAGCGTTGGGCCAACGACAGCGTCATGCAAATGAAGGTCAAGGCGGAGCAGCAGAACGCCAATCAGGGCCACTACAATCATCTGGGCGAGTTTGTGCCGCCCAAGCGACCCAAATCGCTGCACTGGTGCTGTCCCCAGTGCCGCAGGGACTACCAGCCCACCGATCGACCCACACAGTACGAGTGCTTCTGCGGCAAGGAGTTGAATCCGCCGGCGCAGCCATTTCTTGTGCCGCACTCCTGCGGCGAACTCTGCGGCAAGCTGCTGCAACCCAAATGTGGTCACGACTGCAAGCTGCTCTGTCATCCGGGTCCGTGTCCGCCTTGCGCTCAACTGGCGCAAAGCTCGTGTCTGTGCGGCAAGTCGGCGCCGCGTTCCACGCGCTGCATCGACAAGACCTGGCAGTGCAAGCAAAAGTGCCCATCGCTGCTGGCATGCGGCAAGCACAAATGCAATCAGCTCTGCCATCGTCCTGGCCAGTGCCCGCCCTGCAGCAGCAAGAGCTCACAGCCCTGCGAATGCAAGCGCGAGGTGAAGATTGTCAACTGTGCCGAGCCCAAATGGAAGTGTAATAATATATGTGGAGCTCCGTTTGCTTGTGGTCTGCACACGTGCGACAAAGTCTGCCACGCTGGCccctgcggcggcggcgagtGTCCGCAGGGCGTGCGCAGCTGTCCCTGCGGCAAGAGCCTCAAAACTGGCGGCTGCAGCGAGGTGGCCGAAACCTGCGGCGACACCTGCCAGAAGCTGTTGTCCTGTGGCAAGCACTCCTGCGCACAACGCTGCCATCGCGGTGCATGCAATCTGTGTTTGGTGCGCACCAAGAAGAAATGTCGCTGTGGTCTGCACGAAAAGGAGCTGCCCTGCTCCAAGGAGTTTAACTGCGAAACCAAATGCAAACTGATGCGCGACTGTGGCAAGCATGCCTGCAACCGCAAGTGCTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTCAGCTGCAACAAGCACAAGTGTCAGTCTGTGTGCCACAACGGGCCCTGTTATCCCTGCAAGCTGGAGTCGCAGATTAACTGTCGCTGCGGCAAGACGCGCCGCAGCGTGCCCTGCGGACGGGAGAAGAGTGCGCGCATTGTGTGCCAGGAGCTCTGTCGCATTACGGCCAAATGTCATCATGCCATAAAGCATCGCTGCCACAAGGGCGAGTGTCCGCCTTGCTTTCAGCCGTGTGGCCTGCCCAACGATACCAGCAAGTGTGGCCACGTCTGCAAGGCGCCCTGCCATGCGGCCCAACGTGTGCCCAGGCCAGCGGATGCAGCGCGTTCCCAGCGCAAGTATGAGTATCGTGCTTTGCCGCATCCGCGCTGCGTGGAGGACGTCAGCGTCAGCTGCATTGGTGGCCACGAGCTGGCCACCTGGCCCTGCTGGAACTCCAAGCCGTCGTCCTGTCAGCGCAAGTGTGCGCGTCAATTGAAGTGCGGCAATCACAAGTGCGATTTAGTTTGTCATGCGGTGGCGCAGCCGCATGAGATGCTGCAGCAAGCAGGCTGTGCTGGCTGCGAGCAAGGATGTGCCGTTGCGCGGCCTGCCGGCTGCACGCATGCCTGTCCCAAAGCCTGTCATCCGCCGCCCTGTGCGCCCTGCGCCTTTGTCATTAAGGGCAAATGCTTTTGCGGGCTCAATCAGGTTGTTTACAAGTGCTGCGATTACTTCGACATAAAGGGCAGTGAGCAGGAGATTCTGGAGCGGCGACAACAATTTAGCAGCTGTGGCAATCGCTGCCTAAAGAATTTTGATTGCGGACATCGCTGCATGACCATCTGCCATCCCGGCAAGTGTCCCAATCCGGAGCTGTGCCGCAAGAAAGTGCGCATTTACTGCGCCTGCAAACGCCTCAAGCAGGACATCGCCTGCGACAAGCATCGCGGCGGTCAGACAACATTGAGTTGCGACAGCAACTGCCAGGCGGAACGCACCAAGGCCCAGGCcacggagcagcagcagctggagcgtAGGCTGCTGCAGGAGCAGGAAAAGAATCGCTTAGAGCTGGAAAAGTTCGAGCAAAAGTTTGGCAAACGCAAGCCAAAGGAACGTAAAACACTGGACGTGGAACCAACCAAATCGAACATAGACTGGCTGCGTTGGGGCCTCTATGCGCTGGCGCTAGTCGCTGTGCTGGGCGCCCTGGCCGTGGCCAGCTATGCGGACAGCTAG
- Protein Sequence
- MEKFNKVQAKNLAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYQATPVAATAFKGYDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQNANQGHYNHLGEFVPPKRPKSLHWCCPQCRRDYQPTDRPTQYECFCGKELNPPAQPFLVPHSCGELCGKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSAPRSTRCIDKTWQCKQKCPSLLACGKHKCNQLCHRPGQCPPCSSKSSQPCECKREVKIVNCAEPKWKCNNICGAPFACGLHTCDKVCHAGPCGGGECPQGVRSCPCGKSLKTGGCSEVAETCGDTCQKLLSCGKHSCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKLMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCQELCRITAKCHHAIKHRCHKGECPPCFQPCGLPNDTSKCGHVCKAPCHAAQRVPRPADAARSQRKYEYRALPHPRCVEDVSVSCIGGHELATWPCWNSKPSSCQRKCARQLKCGNHKCDLVCHAVAQPHEMLQQAGCAGCEQGCAVARPAGCTHACPKACHPPPCAPCAFVIKGKCFCGLNQVVYKCCDYFDIKGSEQEILERRQQFSSCGNRCLKNFDCGHRCMTICHPGKCPNPELCRKKVRIYCACKRLKQDIACDKHRGGQTTLSCDSNCQAERTKAQATEQQQLERRLLQEQEKNRLELEKFEQKFGKRKPKERKTLDVEPTKSNIDWLRWGLYALALVAVLGALAVASYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- iTF_00589232;
- 80% Identity
- -