Dvii005826.1
Basic Information
- Insect
- Drosophila virilis
- Gene Symbol
- nfxl1
- Assembly
- GCA_007989325.2
- Location
- CM017606.2:3857242-3864262[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 3 1.4e+04 -8.1 6.4 15 19 148 152 147 152 0.82 2 20 0.19 9e+02 -0.3 0.4 4 10 183 189 182 189 0.95 3 20 9.8e-08 0.00046 19.8 15.5 1 18 197 213 197 214 0.98 4 20 2.5 1.2e+04 -3.9 2.8 6 10 240 244 239 244 0.89 5 20 1.5e-07 0.00068 19.3 17.0 1 19 250 269 250 269 0.98 6 20 1.7 7.8e+03 -3.3 0.6 5 10 293 298 293 298 0.92 7 20 1.6e-07 0.00073 19.2 15.1 1 19 304 324 304 331 0.95 8 20 1.3 6.3e+03 -3.0 0.5 1 7 348 353 347 355 0.49 9 20 2.4e-07 0.0011 18.6 10.1 1 18 358 375 358 376 0.96 10 20 1.1 4.9e+03 -2.7 0.4 1 5 385 389 385 394 0.73 11 20 0.00054 2.5 7.9 17.2 1 18 410 427 410 428 0.97 12 20 5e-08 0.00024 20.7 14.7 1 19 437 455 431 455 0.90 13 20 1.6 7.7e+03 -3.3 2.0 6 10 483 487 483 487 0.98 14 20 7.9e-05 0.37 10.5 7.1 9 18 500 509 498 510 0.90 15 20 0.016 76 3.1 5.6 1 11 522 531 522 532 0.95 16 20 1.3 6.1e+03 -2.9 1.4 6 10 587 591 586 591 0.88 17 20 2.3e-06 0.011 15.5 5.5 1 11 597 607 597 608 0.96 18 20 0.033 1.5e+02 2.2 14.4 3 19 637 653 636 653 0.92 19 20 2.5 1.2e+04 -3.9 1.6 8 13 658 663 657 663 0.74 20 20 5.8e-07 0.0027 17.4 12.2 1 16 706 720 706 726 0.92
Sequence Information
- Coding Sequence
- atggaaAAGTTTAATAAAGCGCAGGCCAAAAACTTGGCAGCCGCACAGAAGCTTGTGAACGCGTATGCCTCCAGCTCGGAGGATGAAGGCGAACTAGATGAAAAGCATATACTGgATCTTTTATACAAGCATTACCAAGCCTCAACGGAGGCTCCAAGTAGGGACAATGTGAATCGCACTGCAACCTTTCTGGAGAACACGCTGCATTCGGGCGCGGCTACCTGCTTGATATGCATTGGCAGCATTCGTCGTGTGGAGTCCATTTGGTCATGCAGAAGCTGCTATTGCTTCTTCCATTTGAATTGCATTCAGCGTTGGGCCAACGACAGCGTTATGCAGCTGAAGGTCAAggcagagcaacagcagcagcagcagacgggCCACTACAATCATCTGGGCGAGTATGTGCCGCCCAAGCGTCCGAAATCCTTGTACTGGTGCTGTCCACAGTGCCGCCGGGACTATCAGCCTGCCGATCGACCCACACAGTATGAATGCTTCTGCGGCAAGGAGCTGAATCCGCAGCCACAGCCGTTTCTGGTGCCGCACTCCTGCGGCGAGATCTGCGCCAAACTGCTGCAGCCCAAATGCGGACACGACTGCAAGCTGCTTTGCCATCCCGGTCCGTGCCCGCCGTGTGCCCAGCTCGCGCAGAGCTCCTGCCTGTGCGGCAAGTCACCGAAGCGCAGCGTGCGCTGCATCGACAAGAACTGGCAGTGTCAACAAAAGTGCCAAGCGCTTTTGTCCTGTGGCAAGCATAAGTGCAACCAGCGCTGCCATCGTCCTGGCCAGTGCCCGCCCTGCAGCAGCAAGAGCTCACAGCCCTGCGAATGCAAGCGCGAGGAGAAGGTCGTAAACTGCGCCGAGCCCAAATGGAAGTGCAACAATATATGTGGTGCTGCTTTTGCGTGTGGCCTGCATACTTGCGACAAGGTGTGTCACGCTGGACCTTGTGGCGGCGGCGAGTGTCCTCTGGGCGTGCGCAGTTGTCCCTGCGGCAAGAGTACCAGAACTGGCGACTGCAGCCAGTTGGCGGAAACATGCGGCGACACCTGCCAGAAGCTGTTGTCCTGCGGCAAGCATAGCTGCGCCCAGCGCTGCCATCGCGGCGCCTGCAACTTGTGCCTGGTGCGCACCAAGAAGAAGTGTCGCTGCGGTCTGCACGAGAAGGAGCTACCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAACAGATGCGCGACTGTGGCAAGCATGCCTGTAATCGCAAGTGCTGCGGCGACCAGTGTCCGCCCTGCGAGAAGATTTGCGGCAAGCAGCTAAGCTGCAACAAGCACAAGTGCCAGTCGGTGTGCCACAATGGGCCCTGTTATCCCTGCAAGCTGGAATCCCAGGTGAACTGCCGCTGCGGCAAGACGCGTCGCAGTGTGCCCTGCGGCCGGGAGAAGAGCGCGCGCATTGTCTGCCAGGAGCTGTGCCGCATCACATCCAAGTGTCATCATGCCATCAAGCATCGCTGCCACAAGGGTGAGTGTCCGCCCTGCGTGCAGCCATGTGGCCTGCCCAACGATACCAGCGGCTGTGGACACATATGCAAGGCGCGCTGCCACGCAGCACTGCGTGTGCCCAAGCCAGCGGATGCGCCGCGTGCGCAGCAGCACAAGTATGAATATCGTTCGCTGCCGCATCCGCGCTGCGAGGAGGGCGTCCGTGTTGCCTGCATTGGCGGCCACGAGCTGGCCACCTGGCCCTGCTGGAACTCGAAGCCCACGTCCTGCCAGCGCAAATGTGCGCGTCAATTGAAATGCGGCAATCATCGATGCCAGCTGGTCTGTCACGCGGTGCCCCAGCCTGAGGACATGAACCAGCAGGCGGGCTGTGCCAATTGCGAGGAAGGCTGCGCTATACCGCGACCCCCTGGCTGCACGCACGCCTGCACCAAAGGCTGCCATGCGCCGCCCTGTGCTCCGTGCAGCTTTGTCATCAAAAGCAAATGCCACTGCGGCCTCAACCAGGTCATGTACAAGTGCAGCGAGTACTTCAATCAGGAGGAGGGCGGCAGTGTGCAGCAGACGCTGGAGCGCCGGCAAAAGTTTGGCAGCTGCGGCAATCGTTGCCTCAAAAATTTTGAATGCGGTCATCGCTGCATAACCGTCTGCCATCCCGGCCCGTGTCCCAATCCGGAGCTGTGCCGGAAGAAGGTGCGCATCTACTGCGCCTGCAAGCGGCTCAAGTTGGAGATAGCCTGCGATAAGCATCGTGCGGGGCAAACTGAACTAAAATGCGATGCCAATTGTCTGGAGGAGCTGTCCAAGGCGAAGGCTacggaacagcagcagctggaacgTAAATTAAAGCAGGAGCAGGAAAAAAATCGTCTGGAGCTGGAAAAATACGAGCAAAAGTTCGGCAAGCGCAAGCACAAGGAGCGCAAAGCTTTGGATGTGCAGCCCGCCAGCTATCACATCGATTGGCAACGTTGGGGCATCTATGCTCTGGCCCTGCTCGCCGTAATGGGCGCATTGGGCGTGGCATACTATGCGGATAGCTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYQASTEAPSRDNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCRSCYCFFHLNCIQRWANDSVMQLKVKAEQQQQQQTGHYNHLGEYVPPKRPKSLYWCCPQCRRDYQPADRPTQYECFCGKELNPQPQPFLVPHSCGEICAKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSPKRSVRCIDKNWQCQQKCQALLSCGKHKCNQRCHRPGQCPPCSSKSSQPCECKREEKVVNCAEPKWKCNNICGAAFACGLHTCDKVCHAGPCGGGECPLGVRSCPCGKSTRTGDCSQLAETCGDTCQKLLSCGKHSCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRITSKCHHAIKHRCHKGECPPCVQPCGLPNDTSGCGHICKARCHAALRVPKPADAPRAQQHKYEYRSLPHPRCEEGVRVACIGGHELATWPCWNSKPTSCQRKCARQLKCGNHRCQLVCHAVPQPEDMNQQAGCANCEEGCAIPRPPGCTHACTKGCHAPPCAPCSFVIKSKCHCGLNQVMYKCSEYFNQEEGGSVQQTLERRQKFGSCGNRCLKNFECGHRCITVCHPGPCPNPELCRKKVRIYCACKRLKLEIACDKHRAGQTELKCDANCLEELSKAKATEQQQLERKLKQEQEKNRLELEKYEQKFGKRKHKERKALDVQPASYHIDWQRWGIYALALLAVMGALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- iTF_00491196;
- 80% Identity
- -