Dmet010794.1
Basic Information
- Insect
- Drosophila mettleri
- Gene Symbol
- nfxl1
- Assembly
- GCA_035047625.1
- Location
- JAWNPI010000103.1:1704639-1707726[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.7e+04 -8.1 6.4 15 19 149 153 148 153 0.82 2 18 0.13 1.1e+03 -0.3 0.4 4 10 184 190 183 190 0.95 3 18 6.5e-08 0.00057 19.8 15.5 1 18 198 214 198 215 0.98 4 18 9.7e-08 0.00084 19.3 17.0 1 19 251 270 251 270 0.98 5 18 0.63 5.5e+03 -2.5 0.8 5 10 294 299 294 299 0.93 6 18 5.1e-06 0.045 13.8 9.9 1 19 305 325 305 325 0.90 7 18 0.89 7.7e+03 -3.0 0.5 1 7 349 354 348 356 0.49 8 18 2.1e-07 0.0018 18.2 10.9 1 18 359 376 359 377 0.96 9 18 0.7 6.1e+03 -2.7 0.4 1 5 386 390 386 395 0.73 10 18 0.00036 3.1 7.9 17.2 1 18 411 428 411 429 0.97 11 18 3.3e-08 0.00029 20.7 14.7 1 19 438 456 432 456 0.90 12 18 0.38 3.3e+03 -1.8 0.8 6 10 484 488 483 488 0.95 13 18 5.2e-05 0.46 10.5 7.1 9 18 501 510 499 511 0.90 14 18 0.011 93 3.1 5.6 1 11 523 532 523 533 0.95 15 18 0.86 7.5e+03 -2.9 1.4 6 10 588 592 587 592 0.88 16 18 5.3e-07 0.0046 16.9 6.2 1 11 598 608 598 609 0.96 17 18 0.03 2.6e+02 1.7 15.5 3 18 638 653 629 654 0.89 18 18 5.8e-07 0.005 16.8 12.0 1 16 705 719 705 725 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTTAATAAGGCGCAGGCCAAAAACTTGGCAGCTGCACAGAAATTAGTGAGTGCTTATGCGTCCAGCTCTGAGGATGAAGGCGAACTTGATGAGAAGCATATACTTGATCTCTTATACAAGCATTACAAGGCGCCAGTGAATGCAGCGAGTGAAAACAATGTAAACCGCACCGCAACATTTCTGGAGAATACTCTTCACTCGGGCGCTGctacttgtttaatttgtattgGCAGCATTCGCCGAGTGGAATCTATTTGGTCATGCAAAAGCTGTTACTGCTTTTTCCATCTCAATTGCATTCAACGCTGGGCCAACGACAGCGTCATGCAAATGAAGGTAAaggtggagcagcagcagaccaaTGGCAACCAGGGACATTATAATCATCTAGGCGAATTTGTGCCGCCTAAACGCACAAAGGCGCTCCACTGGTGCTGCCCACAGTGTCGTAGGGAGTATCAACCTGCCGATCGGCCCACACAATATGAATGCTTTTGTGGCAAAGAGTCAAACCCACCGGCACAACCTTTTCTTGTGCCACACTCCTGTGGCGAGATTTGTGGCAAGCTGTTGCAGCCAAAATGTGGCCACGATTGCAAATTGCTTTGCCACCCGGGTCCCTGTCCGCCATGTGCACAATTAGCGCACAGCTCTTGTCTGTGCGGCAAGGCGGCAAAGCGGAGCGTTCGATGCATTGACAAGAGCTGGCAATGTGGGGAAAAGTGCCAATCGCTATTGGCGTGTGGCAAGCACAAATGCAATCAGCGCTGCCATCGCCCAGGTCAGTGTCCGCCATGCAGCAGTAAGAGCTCACAGCCCTGCGTATGCAAACGCGAGCAGAAAGTCGTCAACTGTGCGGAGCCCAAATGGAAATGCAACAACGTGTGTGGCGCACTTTTTGCTTGTGGTATTCATACCTGTGACAAAATATGCCACGCAGAATCCTGTGAAGGCGCAGAGTGTCCCTTTGGCGAGCGTAGCTGTCCCTGTGGCAAGAGCATCAAAACTGGAGGTTGCAACGAGGCGCAAGAGACATGTGGCGATACCTGCCAGAAGCTCTTGGCATGTGGAAAACATAACTGCGCACAGCGCTGTCATCGCGGCAGCTGCAACTTGTGCCTAGTGCGCACGAAAAAGAAATGCCGTTGCGGATTGCATGAAAAGGAGCTGCCCTGTTCCAAGGAGTTCAACTGCGaaaccaaatgcaaacaaatgcgcgATTGTGGAAAACACGCTTGCAATCGCAAGTGCTGTGGCGATCAATGTCCGCCCTGCGAGAAGATTTGCGGTAAGCAGCTGAGTtgcaacaaacacaaatgccaGTCCGTGTGCCACAACGGACCCTGCTATCCATGCAAGCTGGAATCCCAAGTTAACTGTCGCTGTGGCAAGACGCGACGAAACGTGCCCTGCGGTCGCGAGAAGAACGCGCGCATCATGTGCCAGGAGCTATGTCGCATTACGTCAAAATGTCATCATGCCATCAAGCATCGTTGTCACAAGGGCGAATGCCCGCCCTGCGTGCAGCCTTGTGGCTTGGCCAATGACTCCAGCGGCTGTGGGCACATCTGCAAGGCGCGCTGTCATGCAGCGCAGCGCGTACCTCGACCAGATCAGGCGACACGTGGACAGCAGCATAAGTATGAATATCGCGCTTTGCCGCACCCACGCTGCGAGGAGGACGTCAACGTTCGCTGCATTGGCGGCCACGAGCTGGCCACTTGGCCATGCTGGAATTCCAAGCCCTCGTCCTGCCAGCGCAAGTGCGCACGCCAGCTCAAGTGTGGCAATCATCGATGCGAGCGGGTCTGCCATGCAGTGCCACAACCGGAGGATATGCAGCAGCAAGTAGGCTGTGAAAATTGTGAACAAGGCTGCGGCATAACGCGGCCGGCTGGCTGCACGCATGCCTGTACTAAGGGCTGCCATCCGCCACCTTGTGCGCCATGTGCATTCGtaatcaaaaacaaatgctACTGTGGACTCAATCAGGTCATATACAAGTGCAGCGAGTACTTTAATGAAGAGGGCAGTACAGAGGACATTTTGGAGCGGCGGCAAAGGCTCAACAGCTGTGGCAATCGTTGCCTCAAAAATTACGACTGTGGGCATCGGTGCGTGGCAGTCTGCCACCCCGGGCCCTGTCCCAATCCCGAGCTGTGTCGCAAGAAGCTGCGAATCTATTGCAAGTGCAAACGTCTAAAGCAGGAAATTGCCTGTGACAAGCATCGAGCGGGCCAAACGTCGCTCAATTGCGATTCCGATTGCCTGGCGGAACTCTCGAAGGCCCAAGCGacggagcagcaacagctgaagctgaaattGCAACAGGAGCAGGAGAGGAATCGTCTTGAGCTTGAGAAATATGAGCAAAAGTTTGGCAAGCGCAAGCACAAGGAGCGTAAAACTGTAAACGTGGAGCCCACCAAGTCCAACATCAACTGGCAACGTTTGGGCATCTATGCACTGTCTGTTTTGGCCGTCCTGGGTGCACTGGGCGTGGCATATTATGCGGACAGCTAG
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVSAYASSSEDEGELDEKHILDLLYKHYKAPVNAASENNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKVEQQQTNGNQGHYNHLGEFVPPKRTKALHWCCPQCRREYQPADRPTQYECFCGKESNPPAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKAAKRSVRCIDKSWQCGEKCQSLLACGKHKCNQRCHRPGQCPPCSSKSSQPCVCKREQKVVNCAEPKWKCNNVCGALFACGIHTCDKICHAESCEGAECPFGERSCPCGKSIKTGGCNEAQETCGDTCQKLLACGKHNCAQRCHRGSCNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRNVPCGREKNARIMCQELCRITSKCHHAIKHRCHKGECPPCVQPCGLANDSSGCGHICKARCHAAQRVPRPDQATRGQQHKYEYRALPHPRCEEDVNVRCIGGHELATWPCWNSKPSSCQRKCARQLKCGNHRCERVCHAVPQPEDMQQQVGCENCEQGCGITRPAGCTHACTKGCHPPPCAPCAFVIKNKCYCGLNQVIYKCSEYFNEEGSTEDILERRQRLNSCGNRCLKNYDCGHRCVAVCHPGPCPNPELCRKKLRIYCKCKRLKQEIACDKHRAGQTSLNCDSDCLAELSKAQATEQQQLKLKLQQEQERNRLELEKYEQKFGKRKHKERKTVNVEPTKSNINWQRLGIYALSVLAVLGALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- iTF_00559898;
- 80% Identity
- -