Dkan010452.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila kanekoi
Gene Symbol
nfxl1
Assembly
GCA_037075305.1
Location
JBAMCE010000461.1:3262442-3265722[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.9e+04 -8.1 6.4 15 19 148 152 147 152 0.82
2 20 0.13 1.2e+03 -0.3 0.4 4 10 183 189 182 189 0.95
3 20 6.5e-08 0.00061 19.8 15.5 1 18 197 213 197 214 0.98
4 20 1.7 1.6e+04 -3.9 2.8 6 10 240 244 239 244 0.89
5 20 9.7e-08 0.0009 19.3 17.0 1 19 250 269 250 269 0.98
6 20 1.1 1e+04 -3.3 0.6 5 10 293 298 293 298 0.92
7 20 1e-07 0.00097 19.2 15.1 1 19 304 324 304 331 0.95
8 20 0.89 8.3e+03 -3.0 0.5 1 7 348 353 347 355 0.49
9 20 1.6e-07 0.0015 18.6 10.1 1 18 358 375 358 376 0.96
10 20 0.7 6.5e+03 -2.7 0.4 1 5 385 389 385 394 0.73
11 20 0.00036 3.3 7.9 17.2 1 18 410 427 410 428 0.97
12 20 3.3e-08 0.00031 20.7 14.7 1 19 437 455 431 455 0.90
13 20 1.1 1e+04 -3.3 2.0 6 10 483 487 483 487 0.98
14 20 5.2e-05 0.49 10.5 7.1 9 18 500 509 498 510 0.90
15 20 0.004 38 4.5 5.2 1 11 522 531 522 532 0.95
16 20 0.86 8e+03 -2.9 1.4 6 10 587 591 586 591 0.88
17 20 5.8e-06 0.054 13.6 5.9 1 11 597 607 597 608 0.96
18 20 0.015 1.4e+02 2.7 14.0 3 19 637 653 636 653 0.92
19 20 1.7 1.6e+04 -3.9 1.6 8 13 658 663 657 663 0.74
20 20 3.8e-07 0.0036 17.4 12.2 1 16 705 719 705 725 0.92

Sequence Information

Coding Sequence
atggaaaagtttAATAAAGCGCAGGCTAAAAACTTAGCAGCCGCACAGAAGCTAGTGAATGCGTACGCCTCCAGCTCGGAGGATGAAGGCGAACTAGATGAAAAGCACATACTCGATCTTCTATACAAGCATTACCAGCCCTCAAAGGAGGCATCAAGTAAGGACAATGTGAATCGCACTGCCACATTCCTGGAGAATACGCTGCACTCGGGCGCAGCAACGTGCCTGATATGCATTGGCAGCATTCGACGCGTGGAGTCCATTTGGTCGTGCAGGAGCTGCTATTGCTTCTTCCATCTGAATTGCATCCAGCGTTGGGCCAATGACAGCGTCATGCAGATGAAGGTCAaggctgagcagcagcagcagcagcagacgggCCACTACAATCATCTGGGCGAGTATGTGCCGCCCAAGCGTCCCAAATCTTTGCACTGGTGCTGTCCACAGTGTCGCCGGGACTATCAGCCCGCGGATCGACCCACACAGTACGAATGCTTCTGCGGCAAGGAGCAGAATCCGCAGCCGCAGGCGTTCCTGGTGCCGCACTCCTGTGGCGAGATCTGCGCCAAGCTGCTGCAGCCCAAATGTGGCCACGACTGCAAGCTGCTCTGCCATCCCGGTCCGTGCCCGCCTTGCGCCCAGCTCGCGCAGAGCTCCTGCTTGTGCGGCAAGTCGCCGGCGCGCAGCGTGCGCTGCATTGACAAGAACTGGCAGTGCCAGCAAAAGTGCCAAGCGCTTTTATCCTGCGGCAAGCACAAGTGCAACCAGCGCTGCCATCGCCCTGGTCAGTGCCCGCcctgcagcagcaagagctCACAGCCCTGCGAATGCAAGCGCGAGGAAAAGGTCGTCAACTGCGCGGAGCCCAAATGGAAGTGCAACAATaTATGCGGCGCTCCTTTTGCTTGTGGTCTGCATACGTGCGACAAGGTGTGCCACGCTGGCCCTTGTGGCGGCGGCGAGTGTCCTCTGGGCGTTCGCAGCTGTCCCTGCGGCAAGACCACCAGAACTGGCGGCTGCAGCGAGGCGGTGGAAACATGCGGCGACACCTGCCAGAAGCTGTTGTCCTGCGGCAAGCATAGCTGTGCGCAGCGCTGCCATCGCGGCGCCTGCAACTTGTGCCTGGTGCGCACCAAGAAGAAGTGCCGCTGCGGCCTGCACGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCAACTGCGAAACCAAATGCAAGCAGATGCGCGACTGTGGCAAGCATGCCTGTAATCGCAAGTGCTGCGGCGACCAGTGTCCGCCCTGCGAGAAGATTTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAATCGGTCTGCCACAATGGGCCCTGTTATCCCTGCAAGCTGGAATCTCAGGTGAACTGCCGCTGCGGCAAGACGCGTCGCAGCGTGCCCTGCGGCCGGGAGAAGAGCGCGCGCATTGTCTGCCAGGAGCTGTGCCGCATCACGTCCAAATGTCATCATGCCATCAAGCATCGCTGCCACAAGGGCGAGTGTCCGCCGTGCGTGCAGCCATGTGGCTTGCCCAACGATACCAGCGGCTGTGGACACATGTGTAAGGCGCGCTGCCACGCAGCACTGCGTGTGCCCAAGCCAGCGGATGCGCCGCGTGCGCAGCAGCACAAGTATGAATACCGTGCGCTGCCGCATCCGCGCTGTGAGGAGGGCGTCCGCGTTGGGTGCATTGGCGGCCACGAGCTGGCCACTTGGCCCTGCTGGAACTCGAAGCCGACGTCCTGTCAGCGCAAATGTGCGCGTCAATTGAAATGTGGCAATCATCAATGCCAACTGGTCTGCCATGCGGTGCCCCAGCCCCAGGACATGCACCAGCAGACGGGCTGCGCCAACTGCGAAGAAGGCTGCGCGATACCCCGTCCCCCTGGCTGCACGCATGCCTGCAACAAAGGCTGCCATGTGCCGCCTTGTGCTCCGTGCAGCTTTGTCatcaaaagcaaatgccaCTGCGGCCTCAACCAGGTCATGTACAAGTGCAGCGAGTACTTCAATCAGGAGGAGGGCAGTGTGCAGCAGGCGCTGGAGCGCCAACAAAAACTTGGCAGCTGCGGCAATCGTTGTCTCAAAAATTTCGATTGCGGTCATCGCTGCATAACCGTCTGCCATCCCGGCCCATGTCCCAATCCGGAGCTGTGCCGCAAGAAGGTCCGCATCCATTGCGCCTGCAAGCGGCTCAAATTGGAGATAGCCTGCGACAAGCATCGTGCGGGGCAAACGGAATTGAAATGCGATGCAAACTGTCTGGCCGAGCTGTCTAAGGCGAAGGCCAcggaacagcagcagttggaacGTAAATTGAAGCAGGAACAGGAAAGGAATCGCCTGGAGCTAGAAAAATACGAGCAAAAGTTCGGCAAGCGCAAACACAAAGAGCGCAAAGCTTTGGATGTGCAGCCGACCAGCTACCACATTGATTGGCAACGTTGGGGCATCTATGCTCTGGCCCTGCTTGCCGTAATGGGCGCATTGGGCGTGGCATACTATGCGGATAGCTAA
Protein Sequence
MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYQPSKEASSKDNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCRSCYCFFHLNCIQRWANDSVMQMKVKAEQQQQQQTGHYNHLGEYVPPKRPKSLHWCCPQCRRDYQPADRPTQYECFCGKEQNPQPQAFLVPHSCGEICAKLLQPKCGHDCKLLCHPGPCPPCAQLAQSSCLCGKSPARSVRCIDKNWQCQQKCQALLSCGKHKCNQRCHRPGQCPPCSSKSSQPCECKREEKVVNCAEPKWKCNNICGAPFACGLHTCDKVCHAGPCGGGECPLGVRSCPCGKTTRTGGCSEAVETCGDTCQKLLSCGKHSCAQRCHRGACNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKSARIVCQELCRITSKCHHAIKHRCHKGECPPCVQPCGLPNDTSGCGHMCKARCHAALRVPKPADAPRAQQHKYEYRALPHPRCEEGVRVGCIGGHELATWPCWNSKPTSCQRKCARQLKCGNHQCQLVCHAVPQPQDMHQQTGCANCEEGCAIPRPPGCTHACNKGCHVPPCAPCSFVIKSKCHCGLNQVMYKCSEYFNQEEGSVQQALERQQKLGSCGNRCLKNFDCGHRCITVCHPGPCPNPELCRKKVRIHCACKRLKLEIACDKHRAGQTELKCDANCLAELSKAKATEQQQLERKLKQEQERNRLELEKYEQKFGKRKHKERKALDVQPTSYHIDWQRWGIYALALLAVMGALGVAYYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561426;
90% Identity
iTF_00491196;
80% Identity
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