Dpse010434.1
Basic Information
- Insect
- Drosophila pseudotalamancana
- Gene Symbol
- nfxl1
- Assembly
- GCA_037075185.1
- Location
- JBAMCK010000747.1:882720-885938[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.8e+04 -8.1 6.4 15 19 153 157 152 157 0.82 2 20 0.13 1.1e+03 -0.3 0.4 4 10 188 194 187 194 0.95 3 20 6.5e-08 0.00058 19.8 15.5 1 18 202 218 202 219 0.98 4 20 1.9 1.7e+04 -4.1 2.6 6 10 245 249 244 249 0.89 5 20 9.7e-08 0.00087 19.3 17.0 1 19 255 274 255 274 0.98 6 20 1.2 1.1e+04 -3.4 0.9 5 10 298 303 298 303 0.92 7 20 1.1e-07 0.00097 19.1 14.3 1 19 309 329 309 336 0.95 8 20 0.89 7.9e+03 -3.0 0.5 1 7 353 358 352 360 0.49 9 20 1.9e-07 0.0017 18.3 11.7 1 18 363 380 363 381 0.96 10 20 0.7 6.3e+03 -2.7 0.4 1 5 390 394 390 399 0.73 11 20 0.00036 3.2 7.9 17.2 1 18 415 432 415 433 0.97 12 20 3.4e-08 0.0003 20.7 14.7 1 19 442 460 436 460 0.90 13 20 0.37 3.3e+03 -1.8 1.1 6 10 488 492 487 492 0.92 14 20 4.2e-05 0.37 10.8 6.5 9 18 505 514 503 515 0.91 15 20 0.027 2.4e+02 1.8 4.8 1 11 527 536 527 537 0.95 16 20 0.87 7.7e+03 -2.9 1.4 6 10 592 596 591 596 0.88 17 20 1.9e-05 0.17 12.0 4.0 1 11 602 612 602 613 0.96 18 20 0.081 7.2e+02 0.3 16.2 3 18 642 657 641 658 0.93 19 20 1.7 1.5e+04 -3.9 1.6 8 13 663 668 662 668 0.74 20 20 7.3e-07 0.0065 16.5 13.7 1 17 709 727 709 729 0.86
Sequence Information
- Coding Sequence
- atggaaaaatttaataaagcgCAGGCGAAAAACTTGGCAGCCGCTCAGAAGCTTGTGAATGCTTATGCGTCCAGTTCAGAAGATGAAGGTGAACTAGACGAAAAGCATATTCTTGATCTTTTATACAAGCATTATCAGGACGTACCGGATAAAGGGAATGCGTCCAGCCGTAATGGAAACAATGTGAACCGAACTGCCACATTTTTGGAAAATACTCTGCATTCAGGTGCGGCTACGTGTCTGATATGCATTGGTAGCATTCGACGTGTAGAGTCCATTTGGTCATGTAAAAGTTGCTATTGCTTCTTCCACTTGAATTGCATTCAGCGCTGGGCCAACGACAGCGTTATGCAAATGAAGGTGAaggcggagcagcagcagaacggAAACCAGGGCCATTACAATCATCTAGGGGAATATGTACCGCCCAAGCGCACAAAATCACTGCACTGGTGCTGTCCACAGTGCCGTCGGGACTATCAACCCACCGATCGACCAACACAGTATGAATGCTTCTGTGGCAAGGAGTGCAATCCGCAGCCACAACCATTCCTTGTTCCCCATTCCTGTGGCGAGATCTGTGGCAAACTTCTGCAACCCAAATGCGGACACGATTGTAAACTGCTCTGTCATCCCGGTCCGTGTCCCCCGTGTGCTCAACTCGCTAACAACTCGTGCCTGTGTGGCAAGGCGGCGAAACGTAGCGTACGCTGCATTGACAAGAATTGGCAGTGCGAACAGAAGtgCCAATCACTTTTAGCCTGTGGCAAGCACAAATGTAACCAACGCTGCCATAGGCCTGGCCAGTGCCCGCCATGCAGTAGCAAGAGCTCACAGCCTTGCGAATGCAAGCGGGAGGTGAAAGTCGTGAACTGCGCCGAGCCCAAATGGAAGTGCAAGAATATATGTGGTGCACCGTTTGCGTGTGGATTGCATACGTGCGAGAAACTGTGCCATGCAGGAGCCTGCGGTGGGGGGGAATGTCCACTAGGCGTACGCAGCTGTCCCTGCGGCAAGAGCACCATAAGTAGCGGCTGTAGCGAGGTGTTGGAGACATGCGGCGACACCTGCCAGAAGCTCTTATCATGCGGCACACATAGCTGTGCACAGCGCTGTCACCGCGGTCCTTGCAACTTGTGCCTGGTGCGCACCAAGAAGAAGTGTCGGTGTGGTCTGCATGAGAAGGAGCTTCCCTGCTCCAAGGAGTTCAACTGTGAAACGAAATGTAAACAGATGCGAGATTGTGGAAAGCACGCATGCAATCGCAAGtgCTGTGGCGACCAATGTCCTCCCTGCGAGAAGATCTGTGGCAAACAGTTGAGCTGTAACAAGCACAAGTGTCAATCTGTGTGTCATAATGGACCCTGTTATCCTTGCAAGCTGGAATCTCAGGTGAACTGTCGCTGCGGTAAGACTCGACGCAGCGTGCCCTGTGGACGGGAGAAGAATGCGCGCATTGCATGCCAGGAACTCTGTCGGATAACATCAAAGTGTCATCATGCAATCAAACATCGCTGCCACAAAGGCGAGTGTCCGCCCTGTATTCAGCCGTGCGGGCTTCCCAATGACACCAGCGGTTGTGGACACATTTGTAAGATGCGATGCCATGCAGCCATACGTGTGAGCAAGCCAGATCATATACCACGTTCTCAGCAGCAAAAATACGAGTACCGCGCTTTGCCGCATCCACGTTGCGAGGAAGGTGTCACGGTTGGTTGCATTGGCGGTCACGAGTTGGCCACCTGGCCCTGTTGGAACTCCAAGCCGACGTCCTGTCAGCGTAAATGTGCCCGACAATTGAAGTGTGGCAATCATCTGTGCGATCGGATCTGCCATGCAGTGGCCCAGCCGAAGGATATGCAGCAGCAAGTTGGTTGTGAAAGTTGTGAACAAGGATGTGCAATTCCTCGACCCGCCGGCTGCACACATGCCTGTGCCAAAGGCTGCCATCCACCACCGTGTGCTCCGTGTGGATTTGTcatcaaaagcaaatgccatTGCGGTCTAAACCAGGTCGTATACAAATGCAGCGAGTTCTTTAAGGAAGAAGGAAGCCCGAAGGACACTTTAGAGCGCCGCCAAAAGTTTACCAGCTGTGGCAATCGCTGCCTCAAAAATTTCCAATGTGGCCATCGCTGCATTACCGTTTGCCATCCCGGTCCATGTCCAAATCCAGAGCAATGCCGTAAGAAGGTACGCATCTATTGTACCTGCAAGCGGTTAAAGCAAGAGATCGCTTGCGATAAGCATCGTGCGGGTCAAACGGCTTTAAACTGCGATGCAAATTGTGAAGCGGAACTATCCAAAGCACAGGCAATGGAGCAGAAACAGCTGGAGCGTAAGTTGCAACAGGAGCAAGAAAAGAATCGTCTTGAGCTTGAAAAATTCGAACAAAAGTTTGGCAAGCGCAAGCACAAGGAACGCAAAGCTTTGGATGTGGAGCCCACAAAGTCCAACATAAATTGGCAACGTGTGGGCATCTATACGGTGGCCTTACTGGCCGTTATGTTCGCCCTGGGCGTGGCGTACTATGCAGATAGctaa
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVNAYASSSEDEGELDEKHILDLLYKHYQDVPDKGNASSRNGNNVNRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQNGNQGHYNHLGEYVPPKRTKSLHWCCPQCRRDYQPTDRPTQYECFCGKECNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANNSCLCGKAAKRSVRCIDKNWQCEQKCQSLLACGKHKCNQRCHRPGQCPPCSSKSSQPCECKREVKVVNCAEPKWKCKNICGAPFACGLHTCEKLCHAGACGGGECPLGVRSCPCGKSTISSGCSEVLETCGDTCQKLLSCGTHSCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKNARIACQELCRITSKCHHAIKHRCHKGECPPCIQPCGLPNDTSGCGHICKMRCHAAIRVSKPDHIPRSQQQKYEYRALPHPRCEEGVTVGCIGGHELATWPCWNSKPTSCQRKCARQLKCGNHLCDRICHAVAQPKDMQQQVGCESCEQGCAIPRPAGCTHACAKGCHPPPCAPCGFVIKSKCHCGLNQVVYKCSEFFKEEGSPKDTLERRQKFTSCGNRCLKNFQCGHRCITVCHPGPCPNPEQCRKKVRIYCTCKRLKQEIACDKHRAGQTALNCDANCEAELSKAQAMEQKQLERKLQQEQEKNRLELEKFEQKFGKRKHKERKALDVEPTKSNINWQRVGIYTVALLAVMFALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- -
- 80% Identity
- -