Dmer001921.1
Basic Information
- Insect
- Drosophila meridiana
- Gene Symbol
- nfxl1
- Assembly
- GCA_035045185.1
- Location
- JAWNPF010000045.1:8444884-8447962[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 2e+04 -8.1 6.4 15 19 149 153 148 153 0.82 2 19 0.13 1.3e+03 -0.3 0.4 4 10 184 190 183 190 0.95 3 19 6.5e-08 0.00066 19.8 15.5 1 18 198 214 198 215 0.98 4 19 1.9 2e+04 -4.1 2.6 6 10 241 245 240 245 0.89 5 19 9.7e-08 0.00098 19.3 17.0 1 19 251 270 251 270 0.98 6 19 0.63 6.4e+03 -2.5 0.8 5 10 294 299 294 299 0.93 7 19 3e-08 0.0003 20.9 11.4 1 19 305 325 305 325 0.93 8 19 0.89 9e+03 -3.0 0.5 1 7 349 354 348 356 0.49 9 19 8.7e-08 0.00088 19.4 8.7 1 18 359 376 359 377 0.96 10 19 0.7 7.1e+03 -2.7 0.4 1 5 386 390 386 395 0.73 11 19 0.00036 3.6 7.9 17.2 1 18 411 428 411 429 0.97 12 19 3.3e-08 0.00034 20.7 14.7 1 19 438 456 432 456 0.90 13 19 1.1 1.1e+04 -3.3 2.0 6 10 484 488 484 488 0.98 14 19 5.2e-05 0.53 10.5 7.1 9 18 501 510 499 511 0.90 15 19 0.011 1.1e+02 3.1 5.6 1 11 523 532 523 533 0.95 16 19 0.86 8.7e+03 -2.9 1.4 6 10 588 592 587 592 0.88 17 19 8.8e-07 0.0089 16.2 5.1 1 11 598 608 598 609 0.96 18 19 0.018 1.8e+02 2.4 15.4 1 18 637 653 637 654 0.94 19 19 1.3e-07 0.0013 18.9 11.7 1 16 705 719 705 725 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTTAATAAAGCGCAGGCCAAAAACTTGGCAGCAGCACAGAAATTAGTGAGTGCTTACGCCTCCAGCTCCGAGGATGAAGGCGAACTGGATGAAAAGCATATACTTGATCTGTTATACAAACATTACAAGGCTCCAGTGAATGCAGCGAGCGACAACAATGTGAACCGCACAGCCACATTTCTGGAGAATACTCTGCATTCGGGCGCTGCGACGTGTCTGATTTGTATTGGCAGCATTAAACGCGTGGAGTCCATTTGGTCATGCAAGAGCTGCTATTGCTTCTTCCATCTCAACTGCATACAGCGCTGGGCCAACGACAGTGTGATGCAAATGAAGGTCAaggcggagcagcagcagagcaacgGCAATCAGGGTCATTACAATCACCTGGGCGAGTTTGTGCCACCCAAACGTACAAAGTCGCTCCACTGGTGCTGTCCACAGTGCCGTAGGGACTATCAGCCCGCCGATCGACCCACACAGTATGAATGCTTCTGTGGCAAGGAGCCAAATCCGCAGCCTCAGCCCTTCCTCGTGCCGCACTCCTGTGGCGAGATTTGCGGCAAGCTGTTGCAACCAAAATGTGGCCACGATTGCAAATTGCTCTGCCATCCGGGTCCATGTCCACCCTGCGCCCAGCTAGCGCACAGTTCCTGCCTCTGTGGCAAGGCGGCAGAGCGGAGCGTGCGTTGCATTGACAAGAACTGGCAGTGCGAGCAAAAGTGTCAATCGCTTTTGTTGTGTGGCAAGCACAAGTGCAACCAGCGCTGTCATCGACCTGGTCAGTGCCCGCcctgcagcagcaagagctCACAGCCCTGCGAGTGCAAGCGCGAGCAGAAAGTCGTCAACTGTGCGGAGCCCAAATGGAAGTGCAACAACGTCTGTGGCGCTCTCTTTGCGTGTGGCATTCATAGCTGCGAGAAAGTGTGCCACGCTGGATCCTGCGAAGGAGCAGAGTGTCCATTGGGCGTGCGCAGCTGCCCCTGTGGCAAGAGCATCAAAAGTGGAGGCTGCAACGAGCAACAGGAGACATGTGGAGACACTTGCCAGAAGCTCTTGTCCTGCGGCAAGCACTACTGCGCGCAGCGCTGTCATCGCGGCGCCTGCAACTTGTGCCTAGTGCACACGAAGAAGAGATGTCGCTGCGGCCTGCATGAAAAGGAGCTGCCCTGTTCCAAGGAGTTCAACTGCGAGACCAAATGCAAACAGATGCGGGATTGTGGCAAACATGCGTGCAATCGCAAGTGCTGTGGCGATCAGTGTCCGCCCTGCGAGAAGATCTGCGGCAAGCAGCTGAGTTGCAATAAGCACAAATGCCAGTCTGTGTGCCACAACGGACCCTGCTATCCCTGCAAGCTGGAGTCCCAAGTGAACTGTCGTTGCGGCAAGACGCGACGTAGCGTGCCCTGCGGACGCGAGAAGAACGCGCGCATTGTGTGCCAGGAGCTCTGTCGCATTACGTCCAAGTGTCATCATGCCATCAAGCATCGCTGCCACAAGGGCGAGTGCCCACCCTGCGTGCAGGTTTGTGGCTTGGTCAATGATTCCAGCGGCTGTGGACACATCTGCAAGGCGCGCTGCCACGCAGCCCAGCGTGTGCCTCGGCCAGATCAGGCGACACGTGGACAGCGGCACAAGTATGAGTACCGCGCTCTGCCGCATCCACGTTGCGAGGAGGACGTCAGTGTACGCTGTATTGGTGGCCACGAGCTGGCCACCTGGCCGTGCTGGAACTCCAAGCCCTCATCCTGCCAGCGCAAGTGCGCGCGCCAGCTGAAGTGTGGCAATCATCGCTGCGATCGGGTCTGCCACGCAGTGCCTCAGCCGGAGGATATGCAGCAGCAAGTGGGCTGTGCGAATTGTGAACAAGGCTGCGCTATTCCTCGTCCCGCTGGCTGCTCCCATGCCTGCACCAAGGGCTGTCATCCGCCACCCTGTGCTCCATGTGCATTTGTGATCAAGAACAAGTGCTACTGTGGCCTCAACCAGGTCATATACAAGTGCAGCGAGTACTTCAATGAGGAGGGCACTCTGCAGGAGATGGAGGAGCGGCGCCAAAGATTCAACAGCTGCGGCAATCGTTGCCTCAAgaatTTCAATTGCGGCCATCGTTGCATGGCCGTTTGTCATCCCGGCCCCTGTCCCAATCCGGAGCTGTGTCGCAAGAAGCTGCGCATCTATTGCCAGTGCAAGCGTCTGAAGCAGGAGATCGCCTGCGACAAGCATCGGGCTGGTCAAACGTCGCTCGACTGTGATGCCAACTGCCAGGCGGAGCGCTCCAAGGCCCAGGCcacagagcagcaacagcagcagcttaaattgcagcaggagcaggagaggAATCGACTGGAGCTCGAGAAATATGAACAAAAGTTTGGCAAGCGCAAACATAAGGAGCGCAAAGCCTTGGATGTCGAGCCCACCAAATCCAACATCAATTGGCAACGTTTCGCCATCTACGCACTATCCTTGCTGGCCGTAATGGGCGCACTGGGCGTGGCATACTATGCAGACAGCTAG
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVSAYASSSEDEGELDEKHILDLLYKHYKAPVNAASDNNVNRTATFLENTLHSGAATCLICIGSIKRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQQSNGNQGHYNHLGEFVPPKRTKSLHWCCPQCRRDYQPADRPTQYECFCGKEPNPQPQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLAHSSCLCGKAAERSVRCIDKNWQCEQKCQSLLLCGKHKCNQRCHRPGQCPPCSSKSSQPCECKREQKVVNCAEPKWKCNNVCGALFACGIHSCEKVCHAGSCEGAECPLGVRSCPCGKSIKSGGCNEQQETCGDTCQKLLSCGKHYCAQRCHRGACNLCLVHTKKRCRCGLHEKELPCSKEFNCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGREKNARIVCQELCRITSKCHHAIKHRCHKGECPPCVQVCGLVNDSSGCGHICKARCHAAQRVPRPDQATRGQRHKYEYRALPHPRCEEDVSVRCIGGHELATWPCWNSKPSSCQRKCARQLKCGNHRCDRVCHAVPQPEDMQQQVGCANCEQGCAIPRPAGCSHACTKGCHPPPCAPCAFVIKNKCYCGLNQVIYKCSEYFNEEGTLQEMEERRQRFNSCGNRCLKNFNCGHRCMAVCHPGPCPNPELCRKKLRIYCQCKRLKQEIACDKHRAGQTSLDCDANCQAERSKAQATEQQQQQLKLQQEQERNRLELEKYEQKFGKRKHKERKALDVEPTKSNINWQRFAIYALSLLAVMGALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00561426;
- 90% Identity
- iTF_00559898;
- 80% Identity
- -