Dsub006307.1
Basic Information
- Insect
- Drosophila subsilvestris
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_035043285.1
- Location
- JAWNNB010001571.1:5250607-5253710[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 1.9e+04 -8.1 6.4 15 19 151 155 150 155 0.82 2 21 0.13 1.2e+03 -0.3 0.4 4 10 186 192 185 192 0.95 3 21 6.5e-08 0.00063 19.8 15.5 1 18 200 216 200 217 0.98 4 21 0.49 4.7e+03 -2.2 2.7 5 10 242 247 242 247 0.94 5 21 9.3e-09 9e-05 22.5 15.9 1 19 253 272 253 272 0.98 6 21 0.45 4.4e+03 -2.1 1.0 5 10 296 301 296 301 0.93 7 21 2.2e-08 0.00022 21.3 14.8 1 19 307 327 307 334 0.95 8 21 0.88 8.5e+03 -3.0 0.5 1 7 351 356 350 358 0.49 9 21 1.3e-07 0.0012 18.9 14.0 1 19 361 379 361 379 0.99 10 21 0.7 6.7e+03 -2.6 0.4 1 5 388 392 388 397 0.73 11 21 2 1.9e+04 -5.0 2.3 5 10 402 407 402 407 0.91 12 21 0.00036 3.4 7.9 17.2 1 18 413 430 413 431 0.97 13 21 3.3e-08 0.00032 20.7 14.7 1 19 440 458 434 458 0.90 14 21 0.00015 1.5 9.0 8.6 9 18 495 504 493 505 0.91 15 21 0.014 1.3e+02 2.8 6.6 1 12 517 527 517 527 0.96 16 21 0.86 8.3e+03 -2.9 1.4 6 10 583 587 582 587 0.88 17 21 3.8e-06 0.036 14.2 5.7 1 12 593 604 593 604 0.97 18 21 1.6 1.5e+04 -3.8 0.8 5 10 619 624 619 624 0.87 19 21 0.051 4.9e+02 1.0 16.6 3 19 633 649 632 649 0.94 20 21 1.7 1.6e+04 -3.9 1.6 8 13 654 659 653 659 0.74 21 21 5.2e-06 0.05 13.7 8.4 2 16 701 714 700 720 0.87
Sequence Information
- Coding Sequence
- atggaaaaatttaataaagccCAGGCCAAAAACCTTGCTGCGGCCCAGAAACTTGTAGACGCCTACGCCTCCAGCTCTGAAGATGAGGGGGAACTGGATGAGAAGCAAATTTTGGATCAATTGTACAAGCACTACCAACCTACATCGAGTGGGTCTAGTGGAAAGGTGGCAAGTGACAAGGATGCCGCCCGCACCACTACCTTCCTGGAGAACACCCTACACTCTGGTGCGGCCACTTGTCTCATCTGCATTGGCAGCATCAGACGCGTGGAGCCGATATGGTCCTGCGAGAGCTGCTATTGCTTCTTTCACCTCAACTGCATTCAGCGCTGGGCCAATGACAGCATGATGCAGATGAAAGTGAAGGCGGAGCAGCAGGGCAACCAGGGCCACTACAATCATTTGGGGGAGTTTGTGCCGCCCAAGCGGCAAAAATCGCTCCACTGGTGCTGTCCCCAGTGCCGAAGGGACTACCAGCCGGCGCAGAAACCATCCCAGTACAACTGTTTCTGCGGCAAGGAAGAGAATCCACAGTCGCAGCCGTTCCTAGTGCCGCATTCGTGTGGCGAGATTTGTGAGAAACTACTCCAGCCCAAGTGCGGGCACGATTGTAAGCTCCTTTGTCATCCGGGCCCGTGTCCACCCTGTGCTCAGCAGGCGAAGGTACCCTGCCTGTGTGGGAAATCGGCTCCGCGCTCCATGCGCTGCATAGACAAGCAATGGAAGTGCCAGCAAACGTGTAAGGAGCTCTTGGCCTGTGGGAAACATAGGTGCAGCCAAGTATGCCATCGACCAGGACAGTGCCCGCcttgcagcagcaaaagcaaccaGCCATGCGAGTGCAAGCGAGAGTCGAAGGTGGTTAGCTGCTCGGATCGCAAATGGAAGTGCCAAAATATTTGTGGAGCGACATTCGCCTGTGGCTTGCACACTTGTGAAAAGGTGTGCCATGCAGGACCCTGTGGCGGTGGAGAGTGTCCCTTGGAAGTGAGGACATGCCCCTGCGGCAAAAGTAGCCAAATGCGGCCCTGCAACGAGGCTGTGGAAACCTGTGGCGACACTTGCCAGAAGCTCTTATCCTGCGGTCAGCATTCGTGCACGCAACGCTGTCATCGCGGTAACTGCATTTCGTGCCCGGTGAGGACAAAGAAGAAATGCCGCTGCGGTCTGCATGAAAAGGAGCTGCCGTGCTCCAAGGAGCTCACGTGCGAGACCAAATGCAAGCAAATGCGCGACTGTGGCAAGCACGCGTGCAACAGAAAGTGCTGCGGCGATCAGTGCCCGCCCTGCGAAAAGATCTGTGGCAAGCAATTGAGCTGCAACAAACACAAGTGTCAGTCCGTGTGCCACAACGGGCCCTGTTATCCCTGCAAATTGGAGTCCCAGATTAATTGCCGCTGCGGCAAGACGCGACGCAGCGTGCCCTGCGTCTGCTTGGAGCTTTGTCGTATATCGGCCAAGTGCCATCATGCCATAAAACATCGCTGCCACAAAGGTGAATGTCCGCCATGTGGCCAGGTGTGTGGTCTTCCAAATGCTGCCAGCGGCTGTGGACACATCTGCAAGGCGCGCTGTCACGAGGCCGTCAGAGCGAACCGACCGGCCGAGGCGTCGGCCCGCCCTCAAACCAAAAAGtaTGAATACAAAGCACTGCCCCATCCACGCTGCGAGGAGGGCGTCAGCGTCACTTGCATTGGAGGCCACGAGGTGGCCACCTGGCCTTGCTGGAACTCCAAGCCAACTTCCTGCCAGCGCAAATGTTCGCGGAAACTCAAATGTGGCAATCACAAATGCTCACTCGTCTGTCATTCCGTGTCCAATCCGCACgatatgcagcagcaggctggcTGTGCCACATGCGAGGAGGGTTGCATCATACCCCGTCCTACTGGATGTATACACGCCTGCCCCAAGGGCTGCCATCCGCCGCCCTGCACTCCATGCAGCTTTGTGATCAAGAGCAAGTGCCACTGCGGTCTCACGCAGCTGGCGTACAAGTGCAGCGAATTCTACGATGAGGCGGGCACTGTCCAGGAGATAATCGAGCGGAGGGAGAGAttccgcagctgcggcagtcGCTGCTTAAAGAATTTTCCCTGCGCACATCGGTGCATGTCGATATGCCACTCTGGCAAGTGCCCCAATCCGGAGTTCTGCCGCAAGAAGATTCGCATTTTCTGTGCCTGTAAGAGACTCAAGCAGGAGATCGCCTGCGACAAGCATCGGGCTGGACAAACGTCGCTGGAGTGCGACTCTAGCTGTTTGGCCGAACGCAACCGGGCCCAGGCGGCGGAGCAGCAGCTTCTGGAGGAGAAGCGACGCAATGAGGAGGAACGCAATCGCCTAGAACTGGAGAAGTTCGAACAGAAATTCGGAAAACGCAAGCACAAAGAGCGCAAAACCATAGATGTGGGCCCacccaaaacgaaaatgaattgGCAAAGAATAGCCATTTATGTCGCGTCGGTAATGATTGTTCTGGGAGCCATAGCGGTGGCATTCTATGCCGACAGTTAA
- Protein Sequence
- MEKFNKAQAKNLAAAQKLVDAYASSSEDEGELDEKQILDQLYKHYQPTSSGSSGKVASDKDAARTTTFLENTLHSGAATCLICIGSIRRVEPIWSCESCYCFFHLNCIQRWANDSMMQMKVKAEQQGNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAQKPSQYNCFCGKEENPQSQPFLVPHSCGEICEKLLQPKCGHDCKLLCHPGPCPPCAQQAKVPCLCGKSAPRSMRCIDKQWKCQQTCKELLACGKHRCSQVCHRPGQCPPCSSKSNQPCECKRESKVVSCSDRKWKCQNICGATFACGLHTCEKVCHAGPCGGGECPLEVRTCPCGKSSQMRPCNEAVETCGDTCQKLLSCGQHSCTQRCHRGNCISCPVRTKKKCRCGLHEKELPCSKELTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCVCLELCRISAKCHHAIKHRCHKGECPPCGQVCGLPNAASGCGHICKARCHEAVRANRPAEASARPQTKKYEYKALPHPRCEEGVSVTCIGGHEVATWPCWNSKPTSCQRKCSRKLKCGNHKCSLVCHSVSNPHDMQQQAGCATCEEGCIIPRPTGCIHACPKGCHPPPCTPCSFVIKSKCHCGLTQLAYKCSEFYDEAGTVQEIIERRERFRSCGSRCLKNFPCAHRCMSICHSGKCPNPEFCRKKIRIFCACKRLKQEIACDKHRAGQTSLECDSSCLAERNRAQAAEQQLLEEKRRNEEERNRLELEKFEQKFGKRKHKERKTIDVGPPKTKMNWQRIAIYVASVMIVLGAIAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00490466; iTF_00540048; iTF_00548482; iTF_00524803; iTF_00619523; iTF_00537188; iTF_00580356; iTF_00489061; iTF_00592773; iTF_00615269; iTF_00566470; iTF_00494791; iTF_00592072; iTF_00477705; iTF_00615881; iTF_00605258; iTF_00539340; iTF_00488397; iTF_00590637; iTF_00486991; iTF_00597039; iTF_00476304; iTF_00504369; iTF_00480562; iTF_00481909; iTF_00578965; iTF_00608118; iTF_00609558; iTF_00603032; iTF_00483356; iTF_00505084; iTF_00478397; iTF_00546334; iTF_00550622; iTF_00606751; iTF_00505793; iTF_00562148; iTF_00489765; iTF_00508005; iTF_00581954; iTF_00529957; iTF_00613190; iTF_00618022; iTF_00492647; iTF_00533482; iTF_00472046; iTF_00518126; iTF_00474195; iTF_00481237; iTF_00575253; iTF_00581211; iTF_00536446; iTF_00527726; iTF_00565774; iTF_00532047; iTF_00605999; iTF_00613871; iTF_00485542; iTF_00594930; iTF_00512403; iTF_00588548; iTF_00575252; iTF_00484802; iTF_00594228; iTF_00526261; iTF_00541463; iTF_00572283; iTF_00543422; iTF_00515935; iTF_00570079; iTF_00491904; iTF_00611741; iTF_00487690; iTF_00564334; iTF_00474902; iTF_00601440; iTF_00515276;
- 90% Identity
- iTF_00487690;
- 80% Identity
- -