Dper000778.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila persimilis
Gene Symbol
nfxl1
Assembly
GCA_003286085.2
Location
NW:440731-443753[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3 1.4e+04 -8.0 6.4 15 19 120 124 119 124 0.82
2 20 0.19 8.7e+02 -0.2 0.4 4 10 155 161 154 161 0.95
3 20 9.4e-08 0.00044 19.9 15.5 1 18 169 185 169 186 0.98
4 20 0.71 3.3e+03 -2.1 2.7 5 10 211 216 211 216 0.94
5 20 1.4e-08 6.3e-05 22.6 15.9 1 19 222 241 222 241 0.98
6 20 2.7 1.2e+04 -3.9 0.9 5 10 265 270 265 270 0.91
7 20 3.8e-08 0.00018 21.1 15.0 1 19 276 296 276 303 0.95
8 20 1.3 6e+03 -2.9 0.5 1 7 320 325 319 327 0.49
9 20 1.8e-07 0.00086 18.9 14.0 1 19 330 348 330 348 0.99
10 20 0.37 1.7e+03 -1.2 5.1 3 10 369 376 357 376 0.86
11 20 0.00052 2.4 7.9 17.2 1 18 382 399 382 400 0.97
12 20 4.8e-08 0.00023 20.8 14.7 1 19 409 427 403 427 0.90
13 20 0.00023 1.1 9.1 8.6 9 18 472 481 470 482 0.91
14 20 0.02 93 2.9 6.6 1 12 494 504 494 504 0.96
15 20 1.2 5.8e+03 -2.9 1.4 6 10 559 563 558 563 0.88
16 20 5.5e-06 0.025 14.2 5.7 1 12 569 580 569 580 0.97
17 20 2.3 1.1e+04 -3.7 0.8 5 10 595 600 595 600 0.87
18 20 0.69 3.2e+03 -2.1 18.1 4 18 610 624 608 625 0.92
19 20 2.4 1.1e+04 -3.8 1.6 8 13 630 635 629 635 0.74
20 20 9.2e-06 0.043 13.5 9.0 2 17 677 691 676 695 0.90

Sequence Information

Coding Sequence
ATGAAAAACAATTTTGGGATCAATTATACAAGCACTACCAACCGACCGTCCGGTAGGTCTAGTGGAAAGCCGGGAAGTGACAAAGATGTCGCCCGCACTACTACCTTCCTGGAAAACACCCTCCACTCTGGAGCGGCCACTTGCCTCATCTGCATTGGCAATCGACGTGTGGAGCCGATATGGTCCTGTGAGAGCTGTTATTGCTTCTTCCACCTCAATTGCATTCAGCGGTGGGCCAATGACAGCATGATGCAGATGAAAGTAAGGGCGGAGCAGAATGGGAACCAGAATCAGGGCCACTACAATCATTTGGGGGAGTTTGTGCCGCCCAAGCGCCAGAAATCGCTGCACTGGTGCTGTCCCCAGTGCCGAAGGGACTACCAGCCGGCGGAGAAACCAACGCAATACAACTGTTTCTGCGGCAAGGAAGAGAATCCGCAGTCGCAGCCGTTCCTAGTACCGCATtcgtgtggcgaaatttgtaAGAAGCTACTCCAGCCAAAGTGCGGTCACGATTGTAAGCTCCTTTGTCATCCGGGGCCGTGTCCGCCCTGTGCTCAGCAGGCGCAAGTCTCCTGCCTGTGTGGGAAATCCACTCCGCGCTCCATGCGCTGCATAGACAAGCAATGGAAGTGCCAGCAAACGTGCAAAGAGCTCTTGGCCTGTGGGAAGCACAGATGCAGCCAAGTATGCCATCGACCAGGACAGTGTCCGCCTTGCAGCAGCAAGAGCAACCAGCCATGCGAGTGCAAGCGAGAGTCGAAGGTCGTAAGCTGCTCTGATCGGAAATGGAAGTGCACAAATATTTGTGGAGCGACGTTCGCCTGTGGCTTGCACACCTGTGAAAAGGTGTGTCATGCCGGACCCTGCGGTGGTGGAGAGTGTCCCTTGGAAGTGAAGACATGTCCCTGTGGAAAAAATAGCCAAATGCGGCCCTGCAACGAGGCTGTGGAAACCTGTGGTGATACTTGTCAGAAGCTCTTATCCTGCGGTCAGCATTCATGCACTCAGCGCTGTCATCGTGGCAACTGCATTTCGTGCCCAGTGAGGACAAAGAAGAAATGCCGATGTGGCCTTCATGAGAAGGAGCTGCCCTGCTCCAAGGAGCACACCTGCGAGACCAAGTGCAAGCAAATGCGTGACTGTGGCAAGCATGCCTGCAACAGAAAGTGCTGCGGCGATCAGTGCCCGCCCTGCGAAAAGATCTGTGGCAAGCAGTTGAGCTGCAACAAGCACAAGTGCCAGTCCGTGTGCCACAACGGGCCCTGCTATCCCTGCAAACTGGAGTCCCAGATCAACTGCCGCTGCGGCAAGACGCGGCGCAGTGTGCCCTGCGGGCGAGAGAAGAGTGCGCGCATCGTCTGCTTGGAGCTTTGTCGTATATCTGCGAAATGCCATCATGCCATTAAACATCGCTGCCACAAAGGTGAGTGTCCGCCATGTGGCCAGGTATGTGCTCTTCCAAATTCCGACAGCGGCTGTGGACACATCTGCAAGGCGCGTTGTCACGAGGCCGTCAGAGTGAACCGGCCTGCTGATGCGGCCCGCCCTCAAACCAAAAAGTATGAATACAAATCACTGCCACATCCACGCTGCGAGGAGAGCGTCAGCGTCACCTGCATTGGAGGCCACGAGGTAGCCACTTGGCCCTGCTGGAACTCAAAGCCCACTTCTTGCCAGCGCAAATGCTCGCGGAAGCTCAACTGTGGCAATCACAAATGCTCACTCGTCTGTCATTCTGTGTCCAATCCGCAAGATATGCAGCAGCAGGCTGGCTGTGCCACATGCGAGGAGGGTTGCATCATTCCTCGTCCAACGGGTTGCGCACACGCCTGTCCCAAAGGCTGCCATCCGCCGCCGTGCACTCCATGCGGCTTTGTGATCAAAAGCAAGTGCCATTGCGGACTCACGCAGTTGGTGTACAAGTGCAGCGAGTACTTCGATGAGGCAGGCACTGTCCAGGAGATAATTGATCGGAGGGAGAGATTCCGCAGTTGCGGCAATCGCTGCTTAAAGAACTATCCCTGCGCACATCGATGCATGTCAATATGCCACTCTGGCAAGTGCCCTAGTCCCGATCTGTGTCGCAAGAAGGTTCGCATTTTCTGTGCCTGCAAGAGACTCAAGCAGGAGATCGCTTGCGACAAGCATCGGGCTGGGCAAACGTCGCTGGAGTGCGACTCTAGCTGTGTGGCCGAACTCTCCCGTGCTCAGGCGgcggagcagcagcatctgGAGCAGAAGCGCCGCAATGAGGAGGAACGTAATCGACTGGAACTGGAGAAGTTTGAACAGAAATTCGGAAAACGCAAGCACAAAGAACGCAGAACTATAGATGTGGGCCCGCCCAAATCGAAAATAAATTGGGAACAAACGGCCATTTATGTAGCGTCGGTAATGATTGTTCTGGGAGCCATTGCGGTGGCATTCTATGCGGACAGTTAA
Protein Sequence
MKNNFGINYTSTTNRPSGRSSGKPGSDKDVARTTTFLENTLHSGAATCLICIGNRRVEPIWSCESCYCFFHLNCIQRWANDSMMQMKVRAEQNGNQNQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPAEKPTQYNCFCGKEENPQSQPFLVPHSCGEICKKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSTPRSMRCIDKQWKCQQTCKELLACGKHRCSQVCHRPGQCPPCSSKSNQPCECKRESKVVSCSDRKWKCTNICGATFACGLHTCEKVCHAGPCGGGECPLEVKTCPCGKNSQMRPCNEAVETCGDTCQKLLSCGQHSCTQRCHRGNCISCPVRTKKKCRCGLHEKELPCSKEHTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCLELCRISAKCHHAIKHRCHKGECPPCGQVCALPNSDSGCGHICKARCHEAVRVNRPADAARPQTKKYEYKSLPHPRCEESVSVTCIGGHEVATWPCWNSKPTSCQRKCSRKLNCGNHKCSLVCHSVSNPQDMQQQAGCATCEEGCIIPRPTGCAHACPKGCHPPPCTPCGFVIKSKCHCGLTQLVYKCSEYFDEAGTVQEIIDRRERFRSCGNRCLKNYPCAHRCMSICHSGKCPSPDLCRKKVRIFCACKRLKQEIACDKHRAGQTSLECDSSCVAELSRAQAAEQQHLEQKRRNEEERNRLELEKFEQKFGKRKHKERRTIDVGPPKSKINWEQTAIYVASVMIVLGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00487690;
80% Identity
-