Deug011535.1
Basic Information
- Insect
- Drosophila eugracilis
- Gene Symbol
- nfxl1
- Assembly
- GCA_018153835.1
- Location
- NW:4391619-4394871[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.4e+04 -8.1 6.4 15 19 150 154 149 154 0.82 2 20 0.13 9e+02 -0.3 0.4 4 10 185 191 184 191 0.95 3 20 6.5e-08 0.00046 19.8 15.5 1 18 199 215 199 216 0.98 4 20 0.69 4.8e+03 -2.6 1.5 5 10 241 246 241 246 0.91 5 20 1.2e-08 8.1e-05 22.2 16.5 1 19 252 271 252 271 0.97 6 20 0.28 2e+03 -1.4 1.3 5 10 295 300 295 300 0.94 7 20 4.6e-08 0.00032 20.3 10.5 1 19 306 326 306 333 0.94 8 20 0.82 5.7e+03 -2.9 0.5 1 8 350 356 349 357 0.50 9 20 2.1e-08 0.00015 21.4 15.3 1 19 360 378 360 378 0.99 10 20 0.7 4.9e+03 -2.7 0.4 1 5 387 391 387 396 0.73 11 20 2 1.4e+04 -5.0 2.3 5 10 401 406 401 406 0.91 12 20 0.00036 2.5 7.9 17.2 1 18 412 429 412 430 0.97 13 20 3.3e-08 0.00023 20.7 14.7 1 19 439 457 433 457 0.90 14 20 0.00016 1.1 9.0 8.6 9 18 502 511 500 512 0.91 15 20 0.028 2e+02 1.8 6.7 1 11 524 533 524 534 0.96 16 20 0.86 6e+03 -2.9 1.4 6 10 588 592 587 592 0.88 17 20 3.8e-06 0.026 14.2 5.7 1 12 598 609 598 609 0.97 18 20 0.058 4e+02 0.8 16.7 4 18 639 653 637 654 0.93 19 20 1.7 1.2e+04 -3.9 1.6 8 13 659 664 658 664 0.74 20 20 6.7e-07 0.0047 16.6 10.8 1 16 705 719 705 725 0.92
Sequence Information
- Coding Sequence
- atggaaaagttcaATAAAGCGCATGCTAAAAATCTGGCTGCTGCCCAGAAACTGGTGGACACCTATGCCTCCAGCTCCGAGGATGAAGGCGAACTGGATGAGAAGCATATTTTGGAACTTCTATATAAGAACTATCGGCCTACAGAGAGCGCAGAAAAGACCACGGATGCTGCCCGCACCAGTACGTTCCTGGAAAATACCCTTCACTCGGGAGCAGCTACTTGCCTTATCTGCATCGGAAGCATTCGGCGAGTGGAGGCCATTTGGTCGTGTGAGAGCTGCTACTGCTTCTTCCACTTGAACTGCATACAGCGTTGGGCCAACGACAGCATGATGCAGATGAAGGTGAAGGCCGCTGAACAGCAGAATGGTCAGGCCAGCCAGGGTCACTACAATCACCTGGGCGAGTTTGTTCCGCCCAAGCGTCAAAAATCCCTGCACTGGTGCTGCCCTCAGTGTCGCAGGGACTACCAGCCTACGGAGAAACCCACGCAGTACAATTGCTTCTGTGGCAAGGAGGCGAATCCTGAAAATCAGCCATTCCTGGTTCCTCATTCTTGCGGAGAGATCTGCGGGAAGCTGCTACAGCCCAAGTGTGGACACGATTGCAAGTTGCTTTGCCATCCGGGACCATGTCCTCCGTGTGCCCAGCAAGCACAGATCTCCTGTTTGTGCGGGAAATCTAGTCCCAGGTCTGTGAGATGTATTGAAAAACAGTGGAGATGCCAACAAGCGtGCAAGGATCTTTTAGCATGTGGCAAACATAAGTGCAATCAAGTGTGTCATCGACCAGGACAATGTCCCCCTTGTACCAGCAAGAGCTTGCAGCCTTGCGAGTGCCAACGAGAATCCAAGATGGTCAACTGCTCCGATCCTAAATGGAAGTGTCAGAATGTGTGTGGAGCTCCTTTTGCGTGTGGCTTACATATTTGCGAAAAGGTTTGCCATGCCGGTCCCTGCGGCGATGGGGAATGTCCTTTGCAATTCAGGAGTTGTCCATGCGGAAAGAATAGGCAAGTAAGACCCTGTAATGAGGCGGAGGAGACCTGTGGCGATACTTGCCAAAAGGTTTTGTCCTGTGGCCAACACACTTGCACCCAACGTTGTCATCGAGGACCCTGCATTTCCTGTCCAATAAGAACCAAGAAGAAATGTCGTTGTGGTCTGCATGAAAAGGAGCTGCCATGCTCCAAGGAGTTTACTTGCGAAACAAAATGCAAGCAGATACGTGATTGTGGCAAACATGCTTGTAATAGAAAGTGCTGTGGGGATCAGTGTCCGCCCTGTGAAAAAATTTGTGGCAAGCAGCTTAGCTGTAACAAGCACAAATGTCAGTCCGTCTGCCACAATGGACCTTGCTATCCTTGTAAACTGGAATCCCAGATCAACTGCCGCtgtggaaaaaccaaaagaagtGTTCCATGTGGCAGGGAAAGGAGCGCACGCATCGTGTGCTTGGAACTTTGCCGAGTAACTGCCAAATGCCATCACGCTATTAAACATCGTTGCCACAAGGGCGAATGTCCACCTTGTGGCCAAGTCTGCGGTCTTCCCAATGACGTTAGCAAATGTGGACACATCTGTAAGGCTCGTTGCCATCAGGCAGTTCGagttaataaagcaaaagaGGCTAAGCCTCAGGCTAAAAAATACGAGTATAAGGCACAACCCCATCCCCGCTGCGAAGAAGGTGTTGTTGTCACATGCATCGGGGGTCATGAGGTTGCAAGCTGGCCTTGCTGGAACTCTAAGCCTAGCTCCTGCCAGCGAAAGTGTGCGCGACAGCTTAAGTGCGGCAACCACAAGTGTTCATTGGTTTGTCATTCGGTGGCGCTTCCACAGGACATGGCTCAGCAAGCTGGATGTGCTAATTGTGAGGAGGGTTGCTCTGTCCCTCGACCCACCGGATGTGTTCACTCTTGCCCAAAGGGTTGTCATCCCCCGCCCTGTGCTCCCTGCAACTTTGTGATCAAAAGCAAGTGCCACTGCGGCCTTAATCAGTTGGTATACAAATGTAGCGAGTTTTTCGATGAGACGGGTACTGTCCAGGAAATTATCGAGCGAAGGGAAAAGCTACGTAGCTGCGGTAACCGTTGTTTAAAAAACTATCCCTGTGGTCATCGCTGCACAGCGATATGTCATTCTGGTAAGTGTCCTAATCCTGAGTTGTGCCGCAAAAAAGTTCGCATCTTTTGCGCGTGCAAGCGACTCAAGCAGGAGATTGCCTGCGACAAGCACCGTGGTGGTCAGACGACCTTGCTGTGCGACTCCAACTGCAAGGCGGAACAATCTCGAGCCCAAATGGCGGAAAAGGAGCATTTGGAACAAAAGCGTCGCAATGAAGAGGAGCGAAACCGCCTGGAACTCGAGAAGTTTGAGGCTAAGTTCGGCAAGCGCAAGCCCAAGGAGCGTAAAATTGTTGATGTGGGTCCAGCCAAAGCCAAGATTGACTGGCAGCGTAGGGCCATCTATGTAGTGTCAATCCTCACAGTTGTGGGGGCCATCGTAGTGGCTTTCTACCCGGACAGTTAA
- Protein Sequence
- MEKFNKAHAKNLAAAQKLVDTYASSSEDEGELDEKHILELLYKNYRPTESAEKTTDAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNGQASQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPTEKPTQYNCFCGKEANPENQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQISCLCGKSSPRSVRCIEKQWRCQQACKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDPKWKCQNVCGAPFACGLHICEKVCHAGPCGDGECPLQFRSCPCGKNRQVRPCNEAEETCGDTCQKVLSCGQHTCTQRCHRGPCISCPIRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKRSVPCGRERSARIVCLELCRVTAKCHHAIKHRCHKGECPPCGQVCGLPNDVSKCGHICKARCHQAVRVNKAKEAKPQAKKYEYKAQPHPRCEEGVVVTCIGGHEVASWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVALPQDMAQQAGCANCEEGCSVPRPTGCVHSCPKGCHPPPCAPCNFVIKSKCHCGLNQLVYKCSEFFDETGTVQEIIERREKLRSCGNRCLKNYPCGHRCTAICHSGKCPNPELCRKKVRIFCACKRLKQEIACDKHRGGQTTLLCDSNCKAEQSRAQMAEKEHLEQKRRNEEERNRLELEKFEAKFGKRKPKERKIVDVGPAKAKIDWQRRAIYVVSILTVVGAIVVAFYPDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00603756;
- 90% Identity
- iTF_00605999;
- 80% Identity
- -