Dmau013422.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila mauritiana
Gene Symbol
nfxl1
Assembly
GCA_004382145.1
Location
NC:4162408-4165894[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 1.4e+04 -8.1 6.4 15 19 185 189 184 189 0.82
2 19 2 1.4e+04 -5.9 4.2 4 10 220 226 220 226 0.56
3 19 6.8e-08 0.00047 19.8 15.5 1 18 234 250 234 251 0.98
4 19 0.45 3.1e+03 -2.0 2.3 5 10 276 281 276 281 0.93
5 19 2.9e-08 0.0002 20.9 16.8 1 19 287 306 287 306 0.97
6 19 0.29 2e+03 -1.4 1.3 5 10 330 335 330 335 0.94
7 19 5.1e-08 0.00035 20.1 10.6 1 19 341 361 341 368 0.94
8 19 0.93 6.3e+03 -3.0 0.5 1 7 385 390 384 392 0.49
9 19 2.2e-08 0.00015 21.3 15.3 1 19 395 413 395 413 0.99
10 19 0.73 5e+03 -2.7 0.4 1 5 422 426 422 431 0.73
11 19 0.00037 2.6 7.8 17.2 1 18 447 464 447 465 0.97
12 19 3.5e-08 0.00024 20.7 14.7 1 19 474 492 468 492 0.90
13 19 0.00016 1.1 9.0 8.6 9 18 537 546 535 547 0.91
14 19 0.014 98 2.7 6.6 1 12 559 569 559 569 0.96
15 19 0.58 3.9e+03 -2.4 1.3 6 10 623 627 622 627 0.88
16 19 4e-06 0.027 14.1 5.4 1 12 633 644 633 644 0.97
17 19 0.029 2e+02 1.8 15.8 3 18 673 688 672 689 0.94
18 19 2 1.4e+04 -6.9 3.1 10 13 696 699 695 699 0.68
19 19 1.2e-06 0.008 15.8 11.0 1 16 740 754 740 760 0.92

Sequence Information

Coding Sequence
ATGTTTAACATCGATTACCAGGGCTGCCACATCAGATATCTGACGAACGCGCCATCCCTGGTTCTACCCCCAGGAATTTATTCCCAGTTGATAGACAAAAACGCCGGcttaaaaatggaaaagtttaaTAAAGCGCAAGCTAAAAATTTGGCTGCCGCCCAAAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGATGAGGGCGAACTGGATGAGAATCACATTTTGGAACTCCTATACAAGAACTACATACCGACGGACAACGCAGGAAGCTCCAAGGATGCCGCACGCACCACTACGTTCCTGGAAAACACTCTCCACTCGGGAGCGGCAACCTGTCTCATTTGCATCGGAAGCATCCGGCGGGTGGAAGCCATTTGGTCCTGCGAGAGCTGTTACTGCTTCTTTCACTTGAAGTGCATCCAACGGTGGGCCAACGACAGCATGATGCAGATGAAGGTGAAGGCGGCGGAGCAGCAGAACGGCCAAGGCCACTACAATCATCTGGGCGAATTTGTGCCGCCCAAGCGACAGAAATCCCTGCACTGGTGCTGTCCCCAGTGCCGCAGGGACTACCAACCGGCCGATAAGCCCACGCAGTACAACTGCTTCTGCGGCAAGGAGGTGAACCCGGAGAACCAGCCCTTCCTTGTGCCCCACTCATGCGGAGAGCACTGCGGGAAGCTGTTGCAACCAAATTGTGGGCACGACTGCAAGCTGCTATGTCATCCGGGGCCATGTCCTCCTTGTGCGCAGCAGGCGCAGGTCTCGTGTCTGTGTGGTAAATCCAGTCCTAGGTCCGTGAGGTGCATTGACAAGCAGTGGAGGTGTCAGCAGACTTGCAAGGAACTTCTGGCCTGCGGCAAGCACAAGTGTAATCAGGTGTGTCATCAGCCAGGAAAGTGTCCTCCCTGCACCAGCAAAAGCTTACAACCTTGCGAGTGCCAGCGGGAGTCGAAGATGGTCAACTGCTCCGATCGCAAATGGAAGTGTCAAAACGTTTGTGGAGCTCCGTTTGCTTGTGGTTTGCACATTTGCGAGAAGGTGTGTCACGCAGGACCCTGCGGCGATGGAGAGTGTCCTTTGCAAGTCAGGAGTTGCCCATGTGGCAAGAATACCCAGGTAAGACCCTGTAATGAGGCAGAGGAAACCTGTGGCGATACGTGCCAAAAACTTTTGTCCTGTGGCCAGCACACTTGCACCCAGCGTTGTCATCGTGGACCTTGCATTTCCTGCCCAATAAGAACCAAAAAGAAGTGTCGTTGTGGTCTGCACGAAAAGGAGTTGCCCTGCTCCAAAGAGTTTGCATGCGAGACCAAATGCAAGCAAATGCGTGATTGCGGCAAGCATGCCTGCAATAGAAAGTGCTGCGGGGACCAGTGTCCGCCGTGCGAAAAGATTTGTGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGTCAGTCCGTGTGCCACAACGGACCTTGCTATCCTTGTAAACTGGAATCCCAGATTAACTGCCGCTGTgggaaaaccaaaaaaagtGTTCCTTGTGGCAGGGAAAGAAGTGCACGCATTGTCTGCTTGGAACTCTGTCGCATAACACCCAAATGTCACCATGCCATTAAGCATCGTTGTCACAAGGGTGAGTGTCCTCCATGTGGCCAAGTGTGCGGTCTACCCAATGACACCAGCAAGTGTGGGCACATTTGTAAGGCACGATGCCACGAGGCTGTTAGAGTTAATAAACCCAAAGAGGCTAGGCCACAGGCCAAAAAGTATGAGTATAAGGCATTGCCCCATCCACGGTGCGAGGAAGGCGTCGTTGTCACCTGTATCGGAGGTCATGAGGTTGCCACTTGGCCATGCTGGAACTCCAAACCCACTTCCTGCCAGCGAACGTGTGCACGTCAGCTTAAGTGCGGCAATCACAAGTGTCCATTGGTTTGCCATTCCGTACCGCTTCCCCAGGATATGGCTGCGCAAACTGGATGTGCCAACTGCGAGGAGGGTTGCATCGTTCCCCGACCCAGCGGATGTATTCACGCCTGTCCCAAAGGATGTCATCCGCCGCCCTGTGCGCCCTGCAACTTTGTGATTAAGACCAAGTGTCACTGTGGACTCAACCAGTTGGTTTACAAGTGCAACGAGTATTATGATGAAACGGGATCGGTCCAGGAGATCATCGAGCGAAGAGAAAAGCTACGGAGCTGCGGTAACCGATGCTTGAAGAATTATCCTTGCGGACATCGCTGCACAGCCATCTGCCACACAGGCAAGTGCCCAAATCCCGAGTTGTGCCGCAAGAAGGTTCGCATTTTCTGCGCATGCAAGCGACTCAAGCAGGAGATTGCCTGTGACAAACACCGTGCTGGTCAGACATTCTTGGATTGCGACTCCAACTGCAAGGCGGAGCAAACTCGCGTCCAGGCGGCagagcaactgcagctggaACAAAAGCGTCGCGACGAGGAAGAAAGAAACCGCGTGGAACTCGAGAAGTTCGAGGCCAAGTTTGGGAAGCGCAAGCACAAGGAGCGCAAAACTGTGGGTTCCGGACCGGCCAAGACCAAGATCGATTGGCAACGAAGAGCAATCTATGCAGTATCCATTCTAACAGTTGTGGGTGCAATTGTGGTGGCTTTCTACGCGGACAGTTAA
Protein Sequence
MFNIDYQGCHIRYLTNAPSLVLPPGIYSQLIDKNAGLKMEKFNKAQAKNLAAAQKLVDTYASSSEDEGELDENHILELLYKNYIPTDNAGSSKDAARTTTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLKCIQRWANDSMMQMKVKAAEQQNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPADKPTQYNCFCGKEVNPENQPFLVPHSCGEHCGKLLQPNCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSVRCIDKQWRCQQTCKELLACGKHKCNQVCHQPGKCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGAPFACGLHICEKVCHAGPCGDGECPLQVRSCPCGKNTQVRPCNEAEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPIRTKKKCRCGLHEKELPCSKEFACETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTKKSVPCGRERSARIVCLELCRITPKCHHAIKHRCHKGECPPCGQVCGLPNDTSKCGHICKARCHEAVRVNKPKEARPQAKKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPTSCQRTCARQLKCGNHKCPLVCHSVPLPQDMAAQTGCANCEEGCIVPRPSGCIHACPKGCHPPPCAPCNFVIKTKCHCGLNQLVYKCNEYYDETGSVQEIIERREKLRSCGNRCLKNYPCGHRCTAICHTGKCPNPELCRKKVRIFCACKRLKQEIACDKHRAGQTFLDCDSNCKAEQTRVQAAEQLQLEQKRRDEEERNRVELEKFEAKFGKRKHKERKTVGSGPAKTKIDWQRRAIYAVSILTVVGAIVVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
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