Damb011016.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila ambigua
Gene Symbol
nfxl1
Assembly
GCA_018150905.1
Location
JAECWS010000002.1:8639956-8642997[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.5e+04 -8.1 6.4 15 19 152 156 151 156 0.82
2 20 0.13 9.8e+02 -0.3 0.4 4 10 187 193 186 193 0.95
3 20 6.5e-08 0.0005 19.8 15.5 1 18 201 217 201 218 0.98
4 20 0.49 3.7e+03 -2.2 2.7 5 10 243 248 243 248 0.94
5 20 2.2e-06 0.016 15.0 14.6 1 19 254 273 254 273 0.97
6 20 0.46 3.5e+03 -2.1 1.0 5 10 297 302 297 302 0.93
7 20 2.3e-08 0.00017 21.3 14.8 1 19 308 328 308 335 0.95
8 20 0.89 6.8e+03 -3.0 0.5 1 7 352 357 351 359 0.49
9 20 1.3e-07 0.00097 18.9 14.0 1 19 362 380 362 380 0.99
10 20 0.7 5.3e+03 -2.7 0.4 1 5 389 393 389 398 0.73
11 20 2 1.5e+04 -5.0 2.3 5 10 403 408 403 408 0.91
12 20 0.00036 2.7 7.9 17.2 1 18 414 431 414 432 0.97
13 20 3.4e-08 0.00025 20.7 14.7 1 19 441 459 435 459 0.90
14 20 0.00016 1.2 9.0 8.6 9 18 504 513 502 514 0.91
15 20 0.014 1e+02 2.8 6.6 1 12 526 536 526 536 0.96
16 20 0.87 6.6e+03 -2.9 1.4 6 10 592 596 591 596 0.88
17 20 3.8e-06 0.029 14.2 5.7 1 12 602 613 602 613 0.97
18 20 0.052 3.9e+02 1.0 16.6 3 19 642 658 641 658 0.94
19 20 1.7 1.3e+04 -3.9 1.6 8 13 663 668 662 668 0.74
20 20 5.3e-06 0.04 13.7 8.4 2 16 710 723 709 729 0.87

Sequence Information

Coding Sequence
ATGGAAAAATTTAATAAAGTCCAGGCCAAAAACCTTGCTGCTGCCCAGAAACTTGTAGACGCCTACGCCTCCAGCTCTGAAGATGAGGGGGAACTGGATGAGAAGAAAATTTTGGATCAATTGTACAAGCACTATCAGCCGACATCGAGTGGGTCTAGTGGAAAGCCTGCAAGTGACAAGGATGCCGCCCGCACCACCACCTTCCTGGAGAACACCCTACACTCTGGAGCGGCCACTTGTCTCATCTGCATTGGCAGCATCCGACGCGTGGAGCCGATATGGTCCTGCGAGAGCTGCTATTGCTTCTTTCACCTCAACTGCATTCACCGGTGGGCCAAAGACAGCATGTTGCAGATGAAAGTGAAGGCGGAGGAGCAGAATGGCAATCAGGGCCACTACAATCATTTGGGGGAGTTTGTGCCGCCCAAGCGTCAGAGATCGCTCCACTGGTGCTGTCCCCAGTGCCGAAGGGACTACCAGCCAGCGCAGAAACCAACGCAATACAACTGTTTCTGCGGCAAGGAAGAGAATCCACAGTCGCAGCCTTTCCTAGTGCCGCATTCGTGCGGCGAGATTTGTGAGAAACTTCTCCAGCCCAAGTGCGGGCACGATTGTAAGCTCCTTTGTCACCCGGGGCCGTGTCCGCCCTGTGCTCAGCAGGCGCAAGTCTCCTGTCTGTGTGGGAAATCGGCTCCGCGCTCCATGCGCTGCATAGACAAGCAATGGAAGTGCCAGCAAACGTGTAAAGAGCTCTTGGCCTGTGGGAAACATAGGTGCAGCCAAGTATGCCATCGACCAAGACAGTGCCCGCCTTGCAGCAGCAAAAGCAACCAGCCATGCGAGTGCAAGCGAGAGTCGAAGGTGGTTAGCTGCACGGATCGCAAATGGAAGTGCCAAAATATTTGTGGAGCGACATTTGCCTGTGGCCTGCACACTTGTGAAAAGGTGTGCCATGCAGGACCCTGTGGCGGTGGCGAGTGTCCCTTGGAAGTGAGGACATGTCCCTGCGGCAAAACTAGCCAAATGCGGCCCTGCAACGAGGCTGTGGAAACCTGTGGCGACACTTGCCAGAAGCTCTTGTCCTGCGGTCAGCATTCGTGCACCCAGCGCTGTCATCGCGGCAACTGCATTTCGTGCCCGGTGAGGACAAAGAAGAAATGCCGCTGCGGTCTGCATGAAAAGGAGCTGCCGTGCTCCAAGGAGTTCACTTGCGAGACCAAATGCAAGCAAATGCGCGACTGTGGCAAGCATGCGTGCAACAGAAAGTGCTGTGGCGATCAGTGCCCGCCGTGTGAAAAGATATGTGGCAAGCAATTGAGCTGCAACAAACACAAGTGTCAGTCCGTGTGCCACAACGGACCCTGTTATCCCTGCAAATTGGAGTCCCAGATTAATTGCCGCTGCGGCAAGACACGACGCAGCGTGCCCTGCGGTCGAGAGAAGAGTGCGCGTATCGTCTGCTTGGAACTTTGTCGTATATCGGCCAAGTGCCATCATGCCATAAAACATCGCTGCCACAAAGGTGAATGTCCGCCCTGTGGCCAGGTGTGTGGTCTTCCAAATGCTGCCAGCGGCTGTGGACACATCTGCAAGGCGCGCTGTCACGAGGCTGTCAGAGCGAACCGACCTGCCGAGGCGTCGGCCCGCCCTCAAACCAAAAAGTATGAATACAAATCACTGCCACATCCACGCTGCGAGGAGGGCGTCAGCGTCACTTGCATTGGAGGCCACGAGGTGGCCACTTGGCCTTGCTGGAACTCCAAGCCCACTTCCTGCCAGCGCAAATGTTCGCGGAAACTTAAATGTGGCAATCACAAATGCTCGCTCGTCTGTCATTCCGTGTTCAATCCGCAGGATATGCAGCAGCAGGCTGGCTGTGCCGCATGTGAGGAGGGTTGCATCATACCCCGTCCTACTGGATGTATACACGCCTGCCCCAAGGGCTGCCATCCACCGCCTTGCACTCCATGCAGCTTTGTGATCAAGAGCAAGTGCCACTGCGGTCTCACGCAGCTGGTGTACAAGTGCAGCGAATACTACGATGAGGCGGGCACTGTCCAGGAGATAATCGAGCGGAGGGAGAGATTTCGCAGCTGCGGCAGTCGCTGCTTAAAGAATTATCCCTGCGCACATCGGTGCATGTCCATATGCCACTCTGGTAAGTGTCCCAATCCGGAGTTCTGCCGCAAGAAGATTCGCATTTTCTGTGCCTGTAAGAGACTCAAGCAAGAGATCGCATGCGACAAGCATCGGGCTGGACAAACGTCGCTGGAGTGCGACTCTAGCTGTGTAGCCGAACGCACCCGAGCCCAGGCCGCGGAGCAGCAGCTTCTGGAGGAGAAGCGCCGCAATGAAGAGGAACGTAATCGCCAGGAACTGGAAAAGTTCGAACAGAAATTCGGAAAACGCAAGCACAAAGAACGCAAAACCATAGATGTGGGCCCGTCCAAAACGAAAATGAATTGGCAACGAACAGCCATTTATGTCGCGTCGGTAATGATTGTTCTGGGAGCCATAGCGGTGGCATTCTATGCCGACAGTTAA
Protein Sequence
MEKFNKVQAKNLAAAQKLVDAYASSSEDEGELDEKKILDQLYKHYQPTSSGSSGKPASDKDAARTTTFLENTLHSGAATCLICIGSIRRVEPIWSCESCYCFFHLNCIHRWAKDSMLQMKVKAEEQNGNQGHYNHLGEFVPPKRQRSLHWCCPQCRRDYQPAQKPTQYNCFCGKEENPQSQPFLVPHSCGEICEKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSAPRSMRCIDKQWKCQQTCKELLACGKHRCSQVCHRPRQCPPCSSKSNQPCECKRESKVVSCTDRKWKCQNICGATFACGLHTCEKVCHAGPCGGGECPLEVRTCPCGKTSQMRPCNEAVETCGDTCQKLLSCGQHSCTQRCHRGNCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKLESQINCRCGKTRRSVPCGREKSARIVCLELCRISAKCHHAIKHRCHKGECPPCGQVCGLPNAASGCGHICKARCHEAVRANRPAEASARPQTKKYEYKSLPHPRCEEGVSVTCIGGHEVATWPCWNSKPTSCQRKCSRKLKCGNHKCSLVCHSVFNPQDMQQQAGCAACEEGCIIPRPTGCIHACPKGCHPPPCTPCSFVIKSKCHCGLTQLVYKCSEYYDEAGTVQEIIERRERFRSCGSRCLKNYPCAHRCMSICHSGKCPNPEFCRKKIRIFCACKRLKQEIACDKHRAGQTSLECDSSCVAERTRAQAAEQQLLEEKRRNEEERNRQELEKFEQKFGKRKHKERKTIDVGPSKTKMNWQRTAIYVASVMIVLGAIAVAFYADS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00487690;
80% Identity
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