Dpec001388.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila pectinifera
Gene Symbol
nfxl1
Assembly
GCA_008042775.1
Location
VNKC01000886.1:14433-17559[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 1.6e+04 -8.1 6.4 15 19 149 153 148 153 0.82
2 20 0.13 1e+03 -0.3 0.4 4 10 184 190 183 190 0.95
3 20 6.5e-08 0.00051 19.8 15.5 1 18 198 214 198 215 0.98
4 20 0.21 1.7e+03 -1.0 1.7 5 10 240 245 240 245 0.91
5 20 1.2e-08 9.2e-05 22.2 16.5 1 19 251 270 251 270 0.97
6 20 0.28 2.2e+03 -1.4 1.3 5 10 294 299 294 299 0.94
7 20 1e-07 0.00081 19.2 9.3 1 19 305 325 305 332 0.94
8 20 0.89 7e+03 -3.0 0.5 1 7 349 354 348 356 0.49
9 20 2.1e-08 0.00017 21.4 15.3 1 19 359 377 359 377 0.99
10 20 0.7 5.5e+03 -2.7 0.4 1 5 386 390 386 395 0.73
11 20 2 1.6e+04 -5.0 2.3 5 10 400 405 400 405 0.91
12 20 0.00036 2.8 7.9 17.2 1 18 411 428 411 429 0.97
13 20 3.3e-08 0.00026 20.7 14.7 1 19 438 456 432 456 0.90
14 20 0.021 1.6e+02 2.2 7.5 9 18 501 510 499 511 0.90
15 20 0.014 1.1e+02 2.8 6.6 1 12 523 533 523 533 0.96
16 20 0.86 6.8e+03 -2.9 1.4 6 10 587 591 586 591 0.88
17 20 3.8e-06 0.03 14.2 5.7 1 12 597 608 597 608 0.97
18 20 1.5 1.2e+04 -3.8 19.8 4 18 638 652 636 653 0.93
19 20 1.7 1.3e+04 -3.9 1.6 8 13 658 663 657 663 0.74
20 20 6.7e-07 0.0053 16.6 10.8 1 16 704 718 704 724 0.92

Sequence Information

Coding Sequence
atggaaaagttcAATAAAGTGCAAGCAAAAAACCTCGCGGCTGCCCAGAAACTGGTGGACACCTACGCCTCCAGCTCCGAGGATGAAGGCGAACTGGACgaaaagcatattttggATCTGCTCTACAAACACTATAAGCCGTCGGAGACGGTGGGAAGCTCCAAGGATGCGGCAGCCCGCACCAGCACATTCCTGGAGAACACACTGCACTCGGGAGCGGCCACTTGCCTCATTTGCATTGGCAGCATCCGACGCGTGGAGGCGATATGGTCGTGCGAGAGCTGCTACTGCTTCTTTCATCTAAACTGTATTCAGCGGTGGGCCAACGACAGCATGATGCAGATGAAGGTCAAGGCGGCGGAGCAGCAGAACAACGGCCAGGGCCACTATAATCATTTGGGCGAGTTTGTGCCGCCAAAGCGCCAGAAGTCCCTTCACTGGTGCTGCCCCCAGTGCCGGCGTGACTATCAGCCGAAGGAGAAGCCCATGCAGTACAATTGCTTCTGCGGCAAAGAGGCTAATCCGCAGTCGCAGCCTTTCCTGGTTCCACATTCGTGTGGCGAGATCTGCGGCAAGCTGCTTCAGCCAAAGTGTGGACACGACTGCAAGCTGCTGTGTCATCCAGGGCCATGTCCACCTTGTGCCCAGCAGGCGCAGGTCTCCTGCCTGTGCGGCAAGTCCAGTCCCCGTTCCATGAGGTGCATCGACAAGCAGTGGAGGTGTCAGCAGCCGTGCAAGGATCTGCTGGCCTGCGGGAAACACAAGTGCAATCAGGTTTGCCATCGCCCAGGACAATGTCCACCGTGCACCAGCAAGAGTCTGCAGCCGTGCGAGTGCCAACGCGAGTCCAAGATGGTAAACTGCTCCGATCGCAAGTGGAAGTGTCAGAATGTATGTGGAGCTCTCTTTGCTTGCGGACTGCACATCTGTGAGAAGGTTTGCCATGCCGGATCTTGCGGCGACGGCGAGTGTCCTCTGCAAGTCCGCACATGTCCCTGTGGCAAGATTACTCAAATTATACCCTGCAATGAGACGGAAGAAACTTGCGGGGATACCTGCCAAAAGCTATTGTCCTGTGGTCAACACACTTGCACCCAGCGATGTCATCGTGGGCCCTGCATTTCCtGCCCAGTGAGAACCAAAAAGAAGTGCCGCTGTGGCCTCCATGAGAAGGAGCTGCCTTGCTCAAAGGAGTTCACCTGCGAgacaaaatgcaaacagaTCCGTGACTGTGGCAAGCACGCCTGTAATCGGAAGTGCTGCGGGGATCAGTGCCCGCCTTGCGAGAAAATCTGCGGCAAGCAGCTGAGCTGCAACAAGCACAAGTGCCAGTCTGTCTGTCACAATGGACCCTGTTATCCCTGCAAGATGGAATCCCAAATTAATTGTCGTTGTGGCAAAACGAAACGCAGTGTTCCCTGTGGAAGGGAAAAAAGTGCACGTATAGTGTGCCTGGAGCTCTGCCGAATATCTGCCAAATGTCACCACGCCATAAAACATCGGTGCCACAAGTCCGAATGTCCACCGTGTGGGCAAGTGTGCGGTCTGCCCAACGACAACAGTAAATGCGGACACATATGCAAGGCTCGATGCCATGAAGCTGTTCGGGTAAATAAACCTGGAGACGGCAAACCACATGCCAAAAAGTACGAGTACAAGGCCCTACCCCATCCCCGGTGCGAAGAAGGGGTAGTGGTCACATGCATCGGAGGTCATGAGGTGGCCACCTGGCCCTGCTGGAACTCTAAGCCCAGCTCCTGTCAACGAAAGTGTGCCCGTCAGCTCAAGTGCGGCAATCACAAGTGCTCCCTTGTCTGTCACTCGGTGCCGCACCCCGAGGATATGCAACAGCAGGCTGGCTGTGCCAACTGTGAGGAAGGTTGTGCTGTTCCTCGGCCAGCCGGATGCGTTCACGCCTGCCCCAAGGGCTGTCATCCGCCGCCGTGTACACCCTGCCACTTTGTAATCAAGAGCAAGTGCCACTGCGGACTGAATCAGTCGGTGTACAAGTGCAGCGAGTATTTCGATGAGTCCGGCACGGTGCAAGAGATCGTTGAGCGGCGGGAAAATTTACGCAGTTGCGGAAATCGTTGCTTAAAGAATTACAATTGTGGACATCGCTGCACTGCCATTTGCCACTCGGGAAAGTGTCCTAATCCCGAGCTGTGCCGAAAGAAGGTTCGCATATTCTGCGCCTGCAAGCGACTCAAGCTAGAAATTGCCTGTGACAAGCATCGCGCCGGGCAGACATACCTAGAATGCGACTCCAATTGCACGGCTGAGCGAACCCGCGCCCAAGCAGCAGAGCAACAGTATCTAGAGCAGAAGCGTCGGAACGAGGAGGAGCGCAACCGCTTGGAACTCGAGAAGTTCGAGGCAAAGTTTGGCAAGCGGAAGCACAAGGAACGCAAGACCGTAGATGTGGGACCCGCCAAGACAAAGATCGATTGGCAGCGCTACGCCATCTATGCGGTATCGCTTCTCACAGTTGTGGGTGCCATCGCTGTGGCATTCTACGCGGAAAGTTAA
Protein Sequence
MEKFNKVQAKNLAAAQKLVDTYASSSEDEGELDEKHILDLLYKHYKPSETVGSSKDAAARTSTFLENTLHSGAATCLICIGSIRRVEAIWSCESCYCFFHLNCIQRWANDSMMQMKVKAAEQQNNGQGHYNHLGEFVPPKRQKSLHWCCPQCRRDYQPKEKPMQYNCFCGKEANPQSQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQVSCLCGKSSPRSMRCIDKQWRCQQPCKDLLACGKHKCNQVCHRPGQCPPCTSKSLQPCECQRESKMVNCSDRKWKCQNVCGALFACGLHICEKVCHAGSCGDGECPLQVRTCPCGKITQIIPCNETEETCGDTCQKLLSCGQHTCTQRCHRGPCISCPVRTKKKCRCGLHEKELPCSKEFTCETKCKQIRDCGKHACNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKMESQINCRCGKTKRSVPCGREKSARIVCLELCRISAKCHHAIKHRCHKSECPPCGQVCGLPNDNSKCGHICKARCHEAVRVNKPGDGKPHAKKYEYKALPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCARQLKCGNHKCSLVCHSVPHPEDMQQQAGCANCEEGCAVPRPAGCVHACPKGCHPPPCTPCHFVIKSKCHCGLNQSVYKCSEYFDESGTVQEIVERRENLRSCGNRCLKNYNCGHRCTAICHSGKCPNPELCRKKVRIFCACKRLKLEIACDKHRAGQTYLECDSNCTAERTRAQAAEQQYLEQKRRNEEERNRLELEKFEAKFGKRKHKERKTVDVGPAKTKIDWQRYAIYAVSLLTVVGAIAVAFYAES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603756;
90% Identity
iTF_00594930;
80% Identity
-